Under the growing demand for marine fish resources, and the apparent and expected impacts of global climate change, there is a need to conduct long-term monitoring (LTM) to ensure effective management of resources and conservation of biodiversity. However LTM programmes often suffer from design deficiencies and fail to achieve their objectives. These deficiencies stem from the fact that insufficient consideration is afforded to the design phase, with programmes selecting methods that are not suitable to address the objectives, or are not cost-efficient, compromising the sustainability of the LTM. To facilitate the establishment of LTM programmes along the southern coast of South Africa, background research needed to be conducted to identify which methods were most appropriate for LTM of reef fish. This study presents a detailed field-based assessment of the suitability and cost-efficiency of monitoring methods for long-term monitoring of reef fish in the Agulhas Ecoregion of South Africa. The approach adopted to identify the method, or suite of methods most suited for LTM, involved (i) the selection of methods considered suitable for LTM, (ii) the individual assessment and optimisation of method performance, and (iii) the comparative assessment of the fish community sampled by the different methods. The most suited method(s) were then identified as those that provide the most comprehensive assessment of the fish community and had the highest cost-efficiency. The research was conducted between January 2008 and 2011 in the Tsitsikamma and Table Mountain National Park (TNP and TMNP, respectively) marine protected areas (MPAs) within the Agulhas Ecoregion. The methods selected included fish traps (FT), controlled angling (CA), underwater visual census (UVC), remote underwater video (RUV), baited RUV (BRUV) and remotely operated vehicles (ROV). The individual assessment and optimisation was conducted with the FT, UVC, RUV and BRUV methods. The assessment of the FT method aimed to identify the optimal soak time, and whether or not the size of the funnel entrance to the trap affected the catch. The results identified that larger funnel entrances caught more fish and soak times of 80 minutes produced the highest catches per unit effort. However the data were highly variable and the method detected few of the species typical of the region. Fish traps were also associated with high levels of mortality of fish post-release. The assessment of UVC strip transect method involved directly comparing the precision of data collected by researchers and volunteers using a novel double-observer technique (paired-transects). The results showed considerable error in both the volunteers and researchers data, however the researchers produced significantly higher precision data, compared to the volunteers. The distinction between researchers and volunteers was not evident in the data for the dominant species of fish. For all observers, the abundance of a species in the sample had a significant influence on its detectability, with locally scarce or rare species poorly detected. UVC was able to sample the majority of species typical of reefs in the region, however it appeared plagued by observer and detectability biases. The assessments of RUV and BRUV were conducted simultaneously which enabled the assessment of the effect of bait on the observed fish community. In addition the optimal deployment time for both methods to maximise species richness and abundance was determined. The results showed that BRUV, and to a lesser degree RUV, were able to effectively survey the reef fish community for the region with a 50 minute and 35 minute deployment time, respectively. Baited remote underwater video was especially good at detecting the invertebrate and generalist carnivores, and cartilaginous species. On the other hand, RUV was more effective at surveying the microinvertebrate carnivores. Remote underwater video was characterised by higher data variability, compared to BRUV, and was ultimately considered a less cost-efficient monitoring method. Comparative methods assessments were conducted during two field experiments with the FT, UVC and BRUV methods in the TMNP MPA, and the FT, CA, UVC, RUV, BRUV and ROV methods compared in the TNP MPA. The objectives of the comparison were to investigate differences in the fish communities observed with the different methods, and to determine the power of the data to detect an annual 10% growth in the fish populations over a period of five years. The results from the method comparison were in turn used to conduct the cost-benefit analysis to determine the efficiency of the different methods at achieving monitoring objectives requiring population data from multiple trophic and functional groups with the community, and from species of fisheries importance. The results indicated that FT, CA and ROV were ineffective at monitoring the reef fish community, although CA appeared to provide valuable data for the dominant fisheries species. Both CA and FT required minimal initial investment however, the variability in the data translated into high annual monitoring costs, as the required sampling effort was great. The ROV required the highest initial investment and was identified as the least cost-efficient method. Underwater visual census was able to adequately survey the bony fish within the community, however it did not detect the cartilaginous species. Underwater visual census required a large initial investment and was not cost-efficient, as a many samples were required to account for the variability in the data. Remote underwater video provided a comprehensive assessment of the reef fish community, however it too was associated with high levels of variability in the data, compared to BRUV, reducing its cost-efficiency. BRUV provided the most comprehensive assessment of the reef fish community and was associated with the highest cost-efficiency to address the community and fisheries species monitoring objectives. During the course of this research stereo-BRUV has gained considerable support as an effective reef fish monitoring method. Although not tested during this research, stereo-BRUV is preferred to BRUV as it provides accurate data on the size of fish. However, the initial investment of stereo-BRUV is over three times that required for the BRUV. Although it is recommended that a baited video technique be used for LTM in the Agulhas Ecoregion, the choice between BRUV and stereo-BRUV will depend on the specific objectives of the programme and the available budget at the implementing agency.

Larval fish and zooplankton assemblages were studied in nine south and west coast estuaries in the cool-temperate and the cool/warm-temperate boundary region between June 2003 and March 2004. This study served to provide new information on previously unstudied estuaries and expand on existing knowledge of larval fish and zooplankton assemblages associated with various estuary types. The south and west coast estuaries sampled in this study showed lower salinities (12.2 - 13.7), lower water temperatures (14.5 - 16.9 °C) and higher turbidities (k = 0.02 - 0.04) in winter and spring while higher salinities (21.7 - 21.8), higher water temperatures (21.7 - 23.1°C) and lower turbidities (k <0.02) were observed in summer and autumn. Mean winter and summer water temperatures in estuaries were lower than those observed in warm-temperate and subtropical systems by other researchers. A total of 49274 larval fishes were caught, comprising 9 orders, 20 families, 29 genera and 47 taxa. The clupeid Gilchristella aestuaria (78.8 %) dominated the larval fish assemblages and occurred in all estuaries. The majority (70 %) of identified species are endemic to southern Africa and 96.4 % of larval fishes caught were estuary-resident species. The zooplankton study yielded a total of 44 taxa, comprising 7 phyla, >20 orders and >35 families. The copepod Pseudodiaptomus hessei dominated (59 %) the zooplankton and occurred in similar densities to those observed in other South African estuaries. Larval fish and zooplankton varied across seasons, peaking simultaneously in summer although zooplankton showed additional density peaks during the closed phase of some estuaries. Both plankton components were more abundant in the oligohaline and mesohaline zones within the estuaries. Freshwater input, estuary type and the biogeography of the area influenced the composition and structure of larval fish and zooplankton assemblages in these estuaries. The findings suggest that the estuaries are functioning as successful breeding areas for the larvae of endemic estuary-resident fish species and that these estuaries have to be managed to ensure an adequate freshwater supply to maintain the biological integrity of the ecosystem, specially the maintenance of the highly productive River-Estuary Interface (REI) regions.

The management of coastal resources in South Africa has come under review as a result of the degradation of environmental resources along the coast. The challenge being faced by resource managers is to achieve economic growth while sustaining South Africa’s coastal resource base (Nobel, 2000). The South African government (RSA, 2000) has developed a coastal management strategy to meet this challenge: The strategy involves the inclusion of all stakeholders in the formation of policy regarding the management of coastal resources, in a more integrated approach to coastal management. To effectively achieve this stakeholder inclusion, it has become necessary to decentralize the political, administrative and fiscal authority to conduct coastal management functions. With regard to the need for fiscal decentralisation this thesis considers the possibility of implementing localised environmental surcharges to finance coastal management initiatives. The ability of the White Paper for Sustainable Coastal Development (RSA, 2000) to provide theformal institutional structure necessary for the introduction of environmental surcharges is firstconsidered. It is shown that the decentralised management strategy has the potential to create a management style that is transparent and accountability orientated. In addition to this the style is capable of adapting to dynamic local coastal conditions and is therefore an appropriate direction in which to steer coastal management in South Africa. The effectiveness of coastal co-management as an informal institutional arrangement is then examined. Provided that local Coastal Management Fora are created to include all relevant stakeholders and that a source of long term financing is secured co-management has the potential to create the conditions necessary for effective coastal management. With regard to a source of long term financing, local environmental surcharges to finance coastal management initiatives are considered. The public’s willingness to contribute to such a surcharge is analysed in the context of Plettenberg Bay by probing their willingness to pay (WTP) for a Bay Management Plan. A survey instrument is developed to measure the public’s WTP. The design of the instrument is based on the Contingent Valuation (CV) method that is used to analyse the nonmarket benefits that environmental resources (such as Plettenberg Bay) provide the public. It is found that the resident population is willing to pay R15 per month toward a Bay Management Plan whilst domestic and foreign tourists respectively are willing to pay R6 and R22 daily. The aggregation of these WTP estimates yields a total passive use value of between R15 397 900 – R20330 500 annually. This nuclear value of the Bay should be included in the formation of local coastal management policy and provides guidance for the introduction of a local environmental surcharge. A budget for a Bay Management Plan is proposed and a progressive surcharge based on municipal property value is set. To finance the local residents’ share of the budget, a monthly surcharge of R1 would be required of the average valued property. To calculate the domestic and foreign tourist contribution to the budget a schedule of accommodation offering property will be required. However, to finance the entire budget a residential surcharge of approximately R10 would be required of the average valued property. This figure is well below the average resident population WTP of R15, highlighting the fact that an environmental surcharge in Plettenberg Bay is indeed feasible. The difference in reported WTP and the contribution required to finance the Bay Management Plan also highlights that there is scope for experimentation in the introduction of such a surcharge.

The larval fish and zooplankton assemblages were studied in the permanently open Sundays Estuary on the south-east coast of South Africa, using standard boat-based plankton towing methods. A total of 8174 larval and early juvenile fishes were caught, representing 12 families and 23 taxa. The Clupeidae, Gobiidae and Blenniidae were the dominant fish families. Common species included Gilchristella aestuaria, Caffrogobius gilchristi, Omobranchus woodi, Liza dumerilii, Glossogobius callidus and Myxus capensis. Estuarine resident species (Category I) predominantly in the preflexion developmental stage, dominated the system. A total of 19 zooplankton taxa were recorded. Copepoda dominated the zooplankton community. Dominant species included Pseudodiaptomus hessei, Acartia longipatella, Halicyclops sp., Mesopodopsis wooldridgei, and the larvae of Paratylodiplax edwardsii and Hymenosoma orbiculare. Mean larval fish density showed similar trends seasonally, spatially and across salinity zones, with mean zooplankton density in the Sundays Estuary. Gut content analysis of five larval fish species: Gilchristella aestuaria, Pomadasys commersonnii, Monodactylus falciformis, Myxus capensis and Rhabdosargus holubi, revealed species specific diet and prey selection. Although larval fish diet contained a variety of prey items, guts were dominated by P. hessei, chironomid larvae, Corophium triaenonyx, copepod eggs and insect larvae. Physico-chemical drivers and the interactions between these two plankton communities provide information that enables a more holistic view of the dynamics occurring in the Sundays Estuary planktonic ecosystem.

Climate change has been affecting to livelihoods of communities in the coastal plain of the Vietnamese Mekong Delta (VMD). Surface water management in the coastal plain was considered to be limited, especially in enforcement. Therefore, the research aimed to assess the stakeholder involvement, identify the conflict in using the surface water and mechanism to solve and avoid the conflict. The directive interview farmers and governmental staffs was implemented to collect the necessary data. The descriptive statistic was applied in order to analyze the collecting data through farmer survey. The questionnaire was built based on the governance assessment framework “Ten-building Block”. The results showed that the governmental group (including the people committee and the Provincial department) was the highest participatory in the management process both in decision-making level and interested level. The surface water users, especially the farmers participated with the average rate because of their low capacity in making the decision for a new policy or a new agricultural model. Besides, different groups of stakeholders as the non-governmental organization and governmental organization (the local Youth Union, Famer’s and Women’s Association) played an important role in raising the water user’s awareness. The remaining group, including nonagricultural company or traders, nearly were not concerned about the surface water changes. In addition, there were two main types of conflicts identified: between the farmers in the same kind (1) and different kind (2) of cultivation. As the consequence of the natural salinity and the impacts of output water from shrimp pond to the rice cultivation zone, the conflict was about the inefficient water regulation and distribution for each water user. These conflicts were mostly solved through self-negotiating and self-engaging between the farmers. In fact, there was no rule or principle to solve and prevent the potential water use conflict. Thus, this could be a great challenge for the surface water management in the agricultural zone as Soc Trang in the context of increasing the extreme climatic phenomenon. / Biến đổi khí hậu đã và đang tác động lớn đến sinh kế của các cộng đồng ven biển đồng bằng sông Cứu Long (ĐBSCL). Công tác quản lý tổng hợp tài nguyên nước mặt tại vùng ven biển được cho rằng còn tồn tại nhiều hạn chế, nhất là trong triển khai và thực thi. Vì vậy, nghiên cứu được thực hiện tại Sóc Trăng (một tỉnh ven biển ĐBSCL) nhằm đánh giá sự tham gia của các thành phần có liên quan, xác định các mâu thuẫn trong sử dụng nguồn nước mặt cũng như các giải pháp giải quyết và phòng tránh mâu thuẫn. Phương pháp phỏng vấn trực tiếp nông hộ, tham vấn chuyên gia quản lý và thống kê mô tả được áp dụng để đánh giá các mục tiêu đặt ra của đề tài. Các thông tin khảo sát được xây dựng dựa trên bộ mười tiêu chí đánh giá quản trị tài nguyên nước (van Rijswick et al., 2014). Kết quả cho thấy nhóm chính quyền địa phương (bao gồm UBND và các Sở/Ngành) có vai trò và mức độ tham gia cao nhất trong chu trình quản lý. Người sử dụng nước mặt, nhất là nông dân đóng góp sự tham gia tương đối do mức đô ra quyết định về thiết lập chính sách và lựa chọn mô hình canh tác thấp. Mặt khác, các nhóm đối tượng khác như các tổ chức phi chính phủ, Đoàn thể, Hội nông dân và Hội phụ nữ đóng góp vai trò quan trọng trong nâng cao nhận thức và kêu gọi cộng đồng sử dụng hiệu quả nguồn nước mặt. Các nhóm tổ chức kinh tế như doanh nghiệp, tiểu thương gần như không quan tâm đến nguồn nước mặt. Bên cạnh đó, các mâu thuấn về sử dụng nước mặt cũng được xác định. Các mâu thuẫn được phân chia thành 2 nhóm: cùng loại hình canh tác và giữa các loại hình canh tác khác nhau. Các mâu thuẫn chủ yếu về vấn đề điều tiết nguồn nước không hợp lý và thiếu cân bằng trong phân phối nước ngọt cho các đơn vị canh tác do xâm nhập mặn tự nhiên, xả thải nước mặn vào vùng ngọt và khai thác không đồng đều. Các mâu thuẫn này chủ yếu được giải quyết thông qua thương lượng và thỏa thuân giữa các đối tượng có liên quan chứ chưa có bất kỳ một cơ chế hay quy định nào nhằm giải quyết cũng như phòng tránh các mâu thuẫn tiềm tàng. Vì vậy, đây sẽ là một thách thức lớn cho công tác quản lý nguồn nước mặt tại vùng sản xuất nông nghiệp thâm canh như Sóc Trăng trong bối cảnh gia tăng cực đoan khí hậu.

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Les territoires et les paysages littoraux sont soumis à des risques naturels de mieux en mieux identifiés et croissants (tempêtes, submersions…), notamment sous les effets du changement climatique, dont les manifestations, pas seulement eustatiques, auront d’autres conséquences sur les paysages. Comment, dans une logique proactive, tirer parti des modifications de paysages tout en limitant, contrôlant, voire corrigeant les dérives induites par la hausse du niveau marin sur les littoraux ? L’objectif est de montrer qu’il est possible de s’ajuster à ces risques par la prise en compte des paysages et par la pratique d’une gestion plus douce et raisonnée des aménagements côtiers. Après avoir établi un bilan argumenté sur la prise en compte du paysage dans les stratégies aujourd’hui mises en œuvre pour réduire les risques d’inondation et de submersion, la thèse évalue comment le projet de paysage, processus holistique de conception et de partage de visions à long terme, peut-il être un outil de réduction de la vulnérabilité du territoire et de sa société. Puis, la thèse se focalise sur la Camargue, territoire deltaïque emblématique dont les processus naturels et sociaux ont permis d’inventer une société et des paysages créateurs de richesses dans un équilibre dynamique face aux risques permanents d’inondation et de submersion. Cependant, avec, entre autres causes, celle du changement climatique, cet équilibre stratégique est remis en question et nécessite d’élaborer les hypothèses d’une autre Camargue. Ainsi, dans une dimension exploratoire, la thèse propose une illustration argumentée de nouveaux modèles de développement et d’ajustement du système camarguais. La double prise en compte du paysage et du changement climatique et les premiers résultats de l’étude de dépoldérisation des Bas-Champs Picards, nous amènent à revendiquer la mise en œuvre d’une politique de renouvellement littoral en tant que réponse aux problèmes des territoires côtiers d’aujourd’hui et plus encore de demain. / Coastal territories and landscapes are submitted to increasing yet better identified natural risks (storms, flooding, etc.), especially under the effects of climate change. Its reflections, the eustatic ones among others, have various consequences on the landscape. How is it possible, in a proactive reasoning, to take advantage of the lanscape alterations at the same time as limitating, controling and why not correcting the excesses due to the sea level rise on the coasts ? The aim is to show that it is possible to adjust to these risks upon taking landscapes into account and managing the coastal structures a lighter and better thought-out way.An argued assessment on the way the landscape is taken into account in current strategies used to reduce the flooding risks, is followed with an evaluation of the way the landscape project, a holistic process of designing and sharing long term visions, can be used as a tool to reduce the vulnerability of both the territory and its society. Then, the thesis focuses on the emblematic Camargue delta, a territory which natural and social processes allowed to develop a society together with lanscapes creators of wealth in a dynamic balance considering the permanent flooding risks. However, keeping in mind, among other causes, that of climate change, this strategic balance is being questioned and needs the elaboration of hypotheses for another form of Camargue. Thus, in an exploratory dimension, the thesis suggests an argued illustration of new models of development and adjustment for the system of Camargue. Taking into account both the landscape and climate change, the first results of a study on managed realignment in Bas-Champs, Picardie, lead us to a demand for the implementation of a coastal regeneration policy as the answer to the issues of coastal terriories for today, and even more for tomorrow.

Knowledge of the geospatial distribution of vegetation is fundamental for resource management. The objective of this study is to investigate the possible use of airborne LIDAR (light detection and ranging) data to improve classification accuracy of high spatial resolution optical imagery and compare the ability of two classification algorithms to accurately identify and map wetland vegetation communities. In this study, high resolution imagery integrated with LIDAR data was compared jointly and alone; and the nearest neighbor (NN) and machine learning random forest (RF) classifiers were assessed in semi-automated geographic object-based image analysis (GEOBIA) approaches for classification accuracy of heterogeneous vegetation assemblages at Everglades National Park, FL, USA. / Includes bibliography. / Dissertation (Ph.D.)--Florida Atlantic University, 2014. / FAU Electronic Theses and Dissertations Collection

Shorelines are a primary source of attraction for the nearly two million tourists who visit Palm Beach County annually. Many of Palm Beach County beaches are located on barrier islands, separated by a series of inlets which serve as access points to the Intracoastal Waterway. However, inlets are often cited as a source of erosion, through interruption of littoral drift and interaction with nearshore hydrodynamics (e.g., causing wave diffraction or refraction). In an effort to mitigate potential negative impacts of the economically important tidal inlets, Palm Beach County has installed a sand transfer plant (STP) at two inlet locations, the Lake Worth Inlet and the South Lake Worth Inlet. Through analysis of annual aerial photography and beach profile surveys taken between 2000 and 2009, this study will determine what effect, if any, these sand transfer plants are having on the inlet-adjacent shorelines north and south of the two inlets with STP, as well as an inlet without an STP (Boca Inlet). This study hopes to increase the understanding of shoreline dynamics in Palm Beach County, which could recognize important alongshore patterns, such as the occurrence of erosional hot spots, to assist in future mitigation efforts. / Includes bibliography. / Thesis (M.S.)--Florida Atlantic University, 2015. / FAU Electronic Theses and Dissertations Collection

Oregon's ocean waters are a potential source of wind, wave, and tidal energy; of interest to renewable energy entrepreneurs and to the U.S. government as it seeks to bolster energy security. In order to install technology to capture this energy, however, it may be necessary to mitigate conflict with existing ocean space users. The objective of this research was to construct a conflict analysis model in a GIS to answer the following research questions: (1) Within the study area off the coast of Oregon, where are stakeholders currently using ocean space and how many uses overlap? (2) To what extent might existing ocean space use present potential for conflict with renewable energy development? (3) How do various types of uncertainty affect analysis results? (4) What are the implications of these findings for ecosystem based management of the ocean? All available spatial information on ocean space usage by commercial fishing, commercial non-fishing, recreational, Native American, and scientific communities was gathered. Stakeholder outreach with these communities was used to vet the collected data and allow each to contribute knowledge not previously available through GIS data clearinghouses maintained by government or interest groups. The resulting data were used as inputs to a conflict visualization model written in Python and imported to an ArcGIS tool. Results showed extensive coverage and overlap of existing ocean space uses; specifically that 99.7% of the 1-nm² grid cells of the study area are occupied by at least 6 different categories of ocean space use. The six uses with the greatest coverage were: Fishing – Trolling, Habitat, Military, Fishing - Closure Areas, Protected, and Marine Transportation - Low Intensity. An uncertainty analysis was also completed to illustrate the margin for error and therefore the necessity of appropriate stakeholder outreach during the renewable energy siting process, as opposed to relying only on a GIS. Ranking of each category by its potential for conflict with renewable energy development demonstrated which areas of the ocean may be particularly contentious. Because rankings are subjective, a tool was created to allow users to input their own rankings. For the purpose of this report, default rankings were assigned to each as justified by the literature. Results under these assumptions showed that space use and potential for conflict were highest between the coast and approximately 30 nm at sea. This is likely because certain space use is limited by depth (e.g., recreational use); there is increased shipping density as vessels approach and depart major ports; and increased fuel costs associated with traveling further from shore. Two potential applications of model results were demonstrated. First, comparison with existing wave energy permit sites highlighted relative potential for conflict among the sites and the input data detailed the specific uses present. Second, comparison with areas determined most suitable for development by the wave energy industry illustrated that areas of high suitability often also had high rankings for potential for conflict. It appeared that the factors that determined development suitability were often the same factors that drew current ocean space users to those locations. Current support at the state, regional and federal level under the National Ocean Policy for the use of marine spatial planning as a tool to implement ecosystem based management of the oceans requires that tools such as the one developed in this research are used, to ensure that all components of the marine ecosystem are considered prior to implementation of a management plan. The addition of renewable energy to the current social landscape of the ocean will reduce the resource base for many categories of ocean space use. Model results demonstrated that mitigation of conflict between development and existing space use is not merely a best practice supported by current policy, but a necessity. Results presented a visualization of the social landscape of the ocean that could help managers determine which stakeholders to engage during the initial stage of choosing a site for development. / Graduation date: 2012