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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
11

Development of methodology for quantitative detection of E. coli O157:H7 in ground beef via immunoassays and the polymerase chain reaction

Sayedahmed, Assem Abolmaaty 01 January 2006 (has links)
Escherichia coli O157:H7 is recognized as a major human enteropathogen. Immunotechnology and DNA based methods were developed for quantitative detection of E. coli O157:H7 in ground beef. A direct spectrophotometric immuno-agglutination assay was developed for quantitation of specific Escherichia coli O157 IgG. Optimum conditions of the assay consisted of 1 × 108 cells/ml, 40°C, and 0.005M phosphate buffer containing 0.05% NaCl at pH 7.4. The assay was able to quantitate (13 to 104) μg IgG/ml of anti O157 IgG in crude antiserum and was effectively used with different batches of locally produced antisera. A new cell lysis solution designated TZ (2.0% Triton X-100 in 0.1 M Tris-HCl buffer plus 2.5 mg sodium azide/ml, pH 8.0) was developed. TZ lysis solution was found superior to a variety of cell lysing methods (d.H2O, PCR buffer, SDS, Triton X-100, proteinase K, and lysozyme in combination with proteinase K) and released the greatest yield of E. coli O157:H7 DNA targets prior to PCR. Highest amplification of E. coli O157:H7 SLT-1 and SLT-2 DNA sequences were achieved with the aid of TZ lysis solution and pellet paint. Using 0.01 M phosphate buffered saline pH 6.0 with the aid of differential centrifugation resulted in 57% ± 6 recovery of E. coli O157:H7 from seeded ground beef. The optimization of PCR reaction mixture resulted in a minimum detection level of 100 SLT-1 DNA sequence compared to 200 DNA targets before the optimization. Prior to optimization, the minimum limits for the SLT-2 DNA sequence was 150 DNA targets compared to 20 after complete optimization. The complete optimization of PCR reaction mixture contained 1 mM MgCl2, 1.6 μM each of the two primers, (2.5 and 5 units) of Taq polymerase for SLT-1 and SLT-2 respectively, and 0.2 mM of Deoxynucleotide Triphosphates (dNTPs). The methodologies developed thereby resulted in the detection of 100 cells of E. coli O157:H7 with SLT-1 primer and 50 cells with SLT-2 primer per 10 grams of ground beef after 5.5 hours of pre-enrichment in 30 ml of TSB+ at 37°C.

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