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Iron limitation and the role of Siderophores in marine SynechococcusRivers, Adam R. (Adam Reid) January 2009 (has links)
Thesis (Ph. D.)--Joint Program in Oceanography (Massachusetts Institute of Technology, Dept. of Biology; and the Woods Hole Oceanographic Institution), 2009. / This electronic version was submitted by the student author. The certified thesis is available in the Institute Archives and Special Collections. / "June 2009." / Includes bibliographical references. / Marine cyanobacteria in the genus Synechococcus are widely distributed and contribute significantly to global primary productivity. In many parts of the ocean their growth is limited by a lack of iron, an essential nutrient that is virtually insoluble in seawater. To overcome this, Synechococcus have evolved a number of strategies to acquire iron. Gene distribution, metagenomics and a novel immunological flow cytometry assay in the Costa Rica Upwelling Dome were used to estimate the importance of Fe stress. Genomic and metagenomic measures suggest that iron limitation is, paradoxically, more severe in coastal and upwelling areas than in the open ocean, where iron is less abundant. A serological assay found significant differences in the vertical distribution of the Fe stress protein IdiA over just a few meters. Despite average surface ocean iron concentrations of just 0.07 nM, most marine oligotrophic cyanobacteria lack iron-binding siderophores that are present in many heterotrophic marine bacteria. Siderophores are widely distributed in the surface ocean and compose an important portion of the pool of natural ligands that bind >99% of all soluble Fe. In bottle incubations from the Sargasso Sea we found the addition of Fe complexed to an excess of the siderophore desferrioxamine B (DFB) limited Synechococcus growth and stimulated the growth of heterotrophic bacteria in a concentration dependent manner. / (cont.) Laboratory work revealed that excess DFB decreased Synechococcus growth beyond Fe-limited controls at concentrations as low as 20-40 nM. The inhibition was aggravated by light but it could be reversed by the addition of Fe. The DFB inhibition could not be explained by thermodynamic or kinetic models of Fe' or co-limitation with other metals. DFB may interact with some aspect of cellular physiology to directly inhibit cyanobacterial growth. / by Adam R. Rivers. / Ph.D.
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Direct and indirect photoreactions of chromophoric dissolved organic matter : roles of reactive oxygen species and ironGoldstone, Jared Verrill, 1971- January 2002 (has links)
Thesis (Ph. D.)--Joint Program in Oceanography (Massachusetts Institute of Technology, Dept. of Civil and Environmental Engineering, and the Woods Hole Oceanographic Institution), 2002. / Vita. / Includes bibliographical references. / Photochemical transformations of chromophoric dissolved organic matter (CDOM) are one of the principal processes controlling its fate in coastal waters. The photochemical decomposition of CDOM leads to the formation of a variety of biologically available carbon substrates. Photomineralization of CDOM to dissolved inorganic carbon may constitute a significant flux in the global carbon cycle. Photoreactions ultimately lead to the destruction of the chromophores and hence to the loss of absorption and fluorescence (bleaching), thus acting as a sink for CDOM. Photodecomposition may proceed both via direct photochemical reactions, following absorption of photons by CDOM, or via indirect processes, involving DOM reactions with photochemically generated intermediates such as reactive oxygen species (ROS). The reactions of CDOM with two important ROS, superoxide (02-) and hydroxyl radical (OH), have different consequences. Superoxide reactions with CDOM did not appear to degrade the CDOM. Instead, CDOM catalysed the dismutation of 02- to 02 and HOOH. This reactivity has the effect of limiting the steady-state concentration of 02- in most coastal waters. In contrast, reactions of CDOM with radiolytically produced OH formed CO2 and several low molecular weight carboxylic acids, as well as bleached both the absorption and fluorescence at slow rates. These reactions did not increase the bioavailability of this material to a microbial consortium. Both direct and indirect photochemical processes are expected to be accelerated by the presence of iron. / (cont.) However, addition of iron to several coastal seawater samples neither increased the rate of photobleaching nor the apparent quantum yield (AQY) of CO. Similarly, the addition of the siderophore desferrioxamine B did not change the photobleaching rates or the CO AQYs. The addition of 2[mu]M Fe to solutions of Suwannee River Fulvic Acid did not increase the photobleaching rates. In combination with prior results, these findings suggest that indirect photoreactions do not increase the photobleaching rates of CDOM in coastal systems. A model of CDOM photobleaching based on the assumption of negligible indirect photobleaching processes and multiple non-interacting chromophores was created utilizing photobleaching data produced with monochromatic light to calculate the spectra and exponential decay rates of independent components. These components were then used to calculate bleaching spectra for broadband light and compared with actual bleaching spectra. / by Jared Verrill Goldstone. / Ph.D.
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Trace metals and the ecology of marine cyanobacteriaMann, Elizabeth Lowell, 1966- January 2000 (has links)
Thesis (Ph. D.)--Joint Program in Oceanography (Massachusetts Institute of Technology, Dept. of Biology; and Woods Hole Oceanographic Institution), 2000. / Includes bibliographical references. / The marine cyanobacteria Synechococcus and Prochlorococcus are important primary producers in oligotrophic oceans. The abundance and cell division rates of these cyanobacteria can be influenced by trace metals such as iron and copper. Iron is an essential trace metal that is present in the high nutrient, low chlorophyll waters of the equatorial Pacific in extremely low concentrations. When these waters were enriched with iron, Prochlorococcus chlorophyll fluorescence per cell and cell size increased. Cell division rates doubled inside the iron enriched patch and reached two divisions per day in bottle incubations with additional iron, indicating that Prochlorococcus were iron limited. However, cell numbers remained constant because mortality rates nearly doubled after the addition of iron and essentially matched the increases in cell division rate. Trace metals can also be present in toxic, rather than limiting concentrations. Copper is an essential trace element that is toxic to cyanobacteria in pM quantities. In stratified water columns in the Sargasso Sea, free Cu2+ concentrations are high in the mixed layer (up to 6pM) and most of the Prochlorococcus population is located below the thermocline where free Cu2+ concentrations are lower. The distribution of Synechococcus is more uniform with depth. Prochlorococcus isolates were more sensitive to copper than Synechococcus, but members of the low chi BIA (high light adapted) ecotype were less sensitive than strains with high chi BIA ratios (low light adapted). In the field, the in situ concentration of free Cu2+ had a strong effect on the copper sensitivity of Prochlorococcus. Net growth rates were substantially reduced when Prochlorococcus from environments where the in situ free Cu2+ was low (deep mixed layers and below the thermocline in stratified water) were exposed to copper. Prochlorococcus in shallow mixed layers where in situ Cu2 + was high were less sensitive to copper and may have been members of the copper resistant low chi B/ A ecotype. Synechococcus were relatively copper resistant across a range of environments. These data are consistent with the hypothesis that ambient copper levels may influence the relative abundance of Prochlorococcus and Synechococcus in the Sargasso Sea. / by Elizabeth Lowell Mann. / Ph.D.
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Determination of sediment provenance at drift sites using hydrogen isotopes in lipidsEnglebrecht, Amy C. (Amy Cathryn), 1978- January 2004 (has links)
Thesis (S.M.)--Joint Program in Chemical Oceanography (Massachusetts Institute of Technology, Dept. of Earth, Atmospheric, and Planetary Sciences; and the Woods Hole Oceanographic Institution), 2004. / Includes bibliographical references. / Paleoclimate records with sufficient length and temporal resolution to study the occurrence and causal mechanisms of abrupt climate change are exceedingly rare. Rapidly deposited ocean sediments provide the best archive for studying these events through geologic time, but such sites in the open ocean are limited to sediment drift deposits such as the Bermuda Rise in the northwest Atlantic. Using multiple climate proxies in a single core is becoming more common in high-resolution paleoclimate investigations, but a major potential concern for this approach arises from the possibility that the fine fraction of sediment (< 63 [micro]m), and the climate proxies within it, may represent conditions far from the deposition site. We hypothesize that hydrogen isotope ratios of alkenones, a class of lipids from phytoplankton, may provide insight into the source of fine fraction sediment. Because of their restricted sources, broad geographic distribution, and excellent preservation properties, alkenones are of particular interest in the emerging field of' compound-specific hydrogen isotopic analysis, and the sedimentary abundances, extents of unsaturations, and isotopic compositions of alkenones provide quantitative and near-continuous records. We isolated alkenones from cultured unicellular algae (haptophyte Emiliania huxleyi), surface ocean particulate material, and open ocean sediments to determine the extent and variability of hydrogen isotopic fractionation in the di-, tri-, and tetraunsaturated C₃₇ compounds. We then compared the [delta]D of the alkenones in surface sediments between the Bermuda Rise and the Scotian Margin above which a large ([approximately]20%) [delta]D gradient exists. We determined the fractionation between alkenones / (cont.) from suspended particulate samples and the water in which the phytoplanton lived, and examined the variability of alkenone 6D during key climate transitions at the Bermuda Rise. / by Amy C. Englebrecht. / S.M.
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The role of colloidal organic matter in the marine geochemistry of PCB'sBrownawell, Bruce J January 1986 (has links)
Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Earth, Atmospheric and Planetary Sciences and the Woods Hole Oceanographic Institution, 1986. / Microfiche copy available in Archives and Science. / Vita. / Bibliography: leaves 271-297. / by Bruce J. Brownawell. / Ph.D.
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Modelling bottom stress in depth-averaged flows / new approach to modeling bottom stress in depth-averaged flows.Jenter, Harry Leonard January 1989 (has links)
Thesis (Ph. D.)--Joint Program in Oceanographic Engineering (Massachusetts Institute of Technology, Dept. of Civil Engineering; and the Woods Hole Oceanographic Institution), 1989. / Includes bibliographical references (leaves 140-145). / The relationship between depth-averaged velocity and bottom stress for wind-driven flow in unstratified coastal waters is examined here. The adequacy of traditional linear and quadratic drag laws is addressed by comparison with a 2 1/2-D model. A 2 1/2-D model is one in which a simplified 1-D depth-resolving model (DRM) is used to provide an estimate of the relationship between the flow and bottom stress at each grid point of a depth-averaged model (DAM). Bottom stress information is passed from the DRM to the DAM in the form of drag tensor with two components: one which scales the flow and one which rotates it. This eliminates the problem of traditional drag laws requiring the flow and bottom stress to be collinear. In addition, the drag tensor field is updated periodically so that the relationship between the velocity and bottom stress can be time-dependent. However, simplifications in the 2 1/2-D model that render it computationally efficient also impose restrictions on the time-scale of resolvable processes. Basically, they must be much longer than the vertical diffusion time scale. Four progressively more complicated scenarios are investigated. The important factors governing the importance of bottom friction in each are found to be 1) non-dimensional surface Ekman depth ... is the surface shear velocity, f is the Coriolis parameter and h is the water depth 2) the non-dimensional bottom roughness, zo/h where zo is the roughness length and 3) the angle between the wind stress and the shoreline. Each has significant influence on the drag law. The drag tensor magnitude, r, and the drag tensor angle, 0 are functions of all three, while a drag tensor which scales with the square of the depth-averaged velocity has a magnitude, Cd, that only depends on zo/h. The choice of drag law is found to significantly affect the response of a domain. Spin up times and phase relationships vary between models. In general, the 2 1/2-D model responds more quickly than either a constant r or constant Cd model. Steady-state responses are also affected. The two most significant results are that failure to account for 0 in the drag law sometimes leads to substantial errors in estimating the sea surface height and to extremely poor resolution of cross-shore bottom stress. The latter implies that cross-shore near-bottom transport is essentially neglected by traditional DAMs. / by Harry Leonard Jenter, II. / Ph.D.
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Racial Differences and Lived Experiences: Civil Rights Experiences and a Private, Religious, Predominantly White InstitutionBates, Anthony Brandon 22 June 2023 (has links) (PDF)
Purpose: This article explores the expressed thoughts and feelings of 24 research participants who processed and articulated their lived experiences. They each attended the same private, religious, historically, and predominantly White institution and participated in a three-credit course that covered the history of the Civil Rights Movement of the 1950s and '60s, which culminated in an experience in Georgia and Alabama (Civil Rights experience). Methods: In this phenomenological study, the research participants all participated in a semi-structured interview with the same bank of questions. The questions were designed to examine their lived experiences, within the context of participating in the Civil Rights experience and attending the private, religious, historically and predominantly White institution. A phenomenological narrative inquiry employed a specific content analysis approach in conjunction with a constant comparative method to conduct open, axial, and selective coding. Findings: Research participants discussed their reactions to and perceptions of experiences with racial differences, and researchers identified themes that provided perspective on the broader category of racial differences: white spaces, assimilation, stereotypes, microaggressions, and racism. Implications: High-impact programming, such as the Civil Rights experience, may encourage the implementation of measures to foster institutional cultural humility, such as initiating important dialogue and accountability measures between the institution and the students. Racial Battle Fatigue can help both students and institutional personnel identify and interpret racialized experiences. A high-impact "critical experience" may also provide students with the knowledge, experiences, and vocabulary to reckon with racial realities and process their private, religious, predominantly white institution experience.
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[en] REFLECTIONS ON NEOLIBERALISM, SCHOOL AND SUBJECTIVITY / [pt] REFLEXÕES ACERCA DO NEOLIBERALISMO, ESCOLA E SUBJETIVIDADEGIAN CABRAL DE LIMA 22 June 2021 (has links)
[pt] O trabalho pretende realizar uma análise do sistema político econômico Neoliberal. Desde quando este ganha o mundo, a partir dos anos 1970/1980 do século passado e, se impõe como o novo formato do capitalismo globalizado. Junto à essa análise é proposta a relação das instituições de ensino na difusão, produção e reprodução do sistema Neoliberal, tomando este não mais como apenas um sistema político econômico, mas como uma norma social geral que engendra subjetividades, e ou maneiras de ser e estar no mundo atual. Portanto, as análises vão ao caminho, primeiramente, de definir aquilo que chamamos de Neoliberalismo, que modificações este trouxe para as instituições de ensino e por fim suas aproximações, atravessamentos, afastamentos, parcerias e, sobretudo, efeitos na produção de subjetividade, sobretudo no Brasil. / [en] The work intends to carry out an analysis of the Neoliberal economic political system. Since when did it take over the world, from the 1970s to the 1980s of the last century, it was imposed as the new format of globalized capitalism. Along with this analysis, the relationship between educational institutions in the diffusion, production and reproduction of the Neoliberal system is proposed, taking this no longer as just an economic political system but as a general social norm that engenders subjectivities, and or ways of being and being in the current world. Therefore, the analyzes go on the path, first, to define what we call Neoliberalism, what modifications it brought to educational institutions and finally its approximations, crossings, distances, partnerships and, above all, effects on the production of subjectivity, especially in the Brazil.
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"Regler är regler"Kjällquist, Karolina January 2017 (has links)
Reglering och styrning av barns beteende och agerande kan ses som en del av deras uppfostran i såväl förskolan som i det övriga samhället. Men vad är det som regleras och vad eller vem är det som styr och reglerar och vad förväntas regler och styrning leda till? Kan barns motstånd ses som betydelsefullt? Den här studien har som syfte att belysa ovanstående frågor men den berör även barns förmåga att självreglera samt vilka former makthandlingar kan ta i den institutionella förskolemiljön. Det teoretiska perspektivet som används i analysen av det empiriska materialet bygger på maktbegrepp och tankar vilka lånats ifrån Foucault med tyngdpunkt på reglering och styrning. Studien bygger på ett antal observationer gjorda i förskolemiljö. Det som bland annat blir synligt i resultatet är att barn anpassar sig till de regler som pedagoger satt upp men även att de reglerar varandra samt att barn i stora grupper verkar styras av fler regler än individen. Det som regleras är bland annat beteende, agerande och rumslig kontext, vissa aktiviteter ska ske på bestämda platser men även individantalet på dessa platser regleras i stor utsträckning. Förskolemiljöerna är därmed en aktiv del i den styrning och reglering som existerar och pedagogerna använder sig ofta av miljön för att tydliggöra regler. Det visuella i miljön kan tänkas underlätta för barns inlärning av regler, förhållningssätt och självreglering men är inte alltid tillräckligt enligt denna studie. En del barn besitter förmågan att självreglera i vissa situationer medan andra barn har svårigheter och behöver stöd i de samma. Detta innebär att det finns ett behov av kunskap hos pedagoger i hur stöttning av barns förmåga att självreglera kan utformas. Det som också blir synligt i resultatet är ett frekvent förekommande motstånd mot regler och styrning. Motståndet sker på olika sätt och ibland i ganska subtila former men kan ses som barns möjlighet att utöva delaktighet och erhålla inflytande över sin tillvaro i förskolan.
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"Ta inte min"Trygg, Cecilia, Weibull, Caroline January 2017 (has links)
Studiens syfte är att undersöka vilka makttekniker pedagoger använder samt hur barnens motstånd kommer till uttryck vid övergångarna från den fria leken till planerade aktiviteter. I vår studie har vi utgått från våra frågeställningar. Vilka makttekniker använder pedagogerna för att bryta barns lek och samla de inför nästa aktivitet? Vilken typ av motstånd kommer till uttryck i barngruppen gentemot pedagogerna? För att få svar på våra frågeställningar gjorde vi en kvalitativ studie på en förskola i ett mindre samhälle. Metoden som vi använde var observation genom filmning. Därefter transkriberade vi vårt insamlade material och strukturerade det efter fyra teman.Grunden för vårt analysarbete är Michel Foucaults teori om makt och styrning. Vi har även kompletterat med studier av Dolk, Nordin-Hultman, Markström och Tullgren som även de har utgångspunkt i Foucaults teorier med i sin forskning. Resultatet av vår studie visar att det finns många olika makttekniker som pedagogerna använder för att styra barnen i önskvärd riktning. Vår studie visar också på hur bjällran som är en disciplineringsteknik styr både barn och pedagoger i verksamheten. Barnen använder sig av olika motståndsstrategier beroende på vilken styrteknik pedagogerna använder och även när barnen gör motstånd tvingas de att inordna sig i verksamhetens rutiner. De slutsatser vi har gjort är att den makt pedagogerna använde sig av för att styra barnen i önskvärd riktning har skett i all välmening.
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