What drives species diversity across landscapes is one of the most fundamental questions in ecology. Further, understanding the mechanisms underlying species diversity patterns is important not only for forming and challenging ecological theories but also essential for appropriate landscape management and effective nature conservation. This thesis focuses on patterns of vascular plant, moss and liverwort species richness and composition in relation to water flow in boreal-forest catchments, focusing mostly on riparian zones (RZs), that is terrestrial areas bordering streams and rivers. I addressed some of the most essential questions related to the ecology of riparian vegetation including the role of stream network position, groundwater (GW) flow paths, substrate availability, upland perturbations, and stream restoration. I also investigated how riparian soil processes and habitat properties relate to these factors in order to provide a holistic understanding of riparian dynamics. The results showed that the species richness and composition of riparian vascular plants, mosses and liverworts are strongly influenced by position along the stream network, GW discharge, presence of variable substrates in RZs, and by stream restoration. Generally, more species were found downstream in the network, at sites with inputs of upland GW, sites with high diversity of substrates (e.g., open mineral soil, rocks, stones, wood and bark), and along streams restored after channelization. This thesis also describes how riparian habitat properties responded to position in the landscape and human impacts, thus providing mechanistic links between plant species diversity and riparian processes across spatial scales. These ecological insights are further implemented into numerous recommendations for freshwater and upland management in boreal Sweden. Given that streams and rivers connect landscape elements both longitudinally and laterally I argue that management plans should be designed for entire catchments instead of individual river segments. Ignoring the connectivity of streams as well as the high connectivity of riparian areas to uplands via GW flows may result in failure of restoration, mitigation and/or protection actions. Further, during forestry operations more emphasis should be placed on GW discharge areas along streams and rivers, because they represent important ecological and biogeochemical hotspots in the landscape. The riparian buffers left along streams in boreal catchments affected by forestry are presently insufficiently wide and often uniform in width. This threatens the assemblages of species in GW discharge hotspots and the ecosystem services they provide. Overall, this thesis describes a holistic picture of riparian diversity patterns and riparian processes in boreal landscapes, acknowledges and elaborates on current ecological theories, presenting new patterns in biodiversity, and offers management guidelines.

Excess nitrogen (N) from terrestrial landscapes poses environmental challenges as it moves via surface runoff and groundwater flows into aquatic ecosystems. Managing and anticipating the environmental challenges associated with these altered N inputs from terrestrial to aquatic ecosystems requires a deep understanding of how N is biogeochemically transformed, retained, and/or transported in streams and rivers. Here, I used long-term data on surface stream and groundwater chemistry as well as discharge to determine the main sources of N and estimate the N mass balance of a 1.4 km boreal stream reach. The goal was to evaluate daily net uptake or production rates of different N forms (ammonium - NH4-N, nitrate NO3-N and dissolved organic N - DON) throughout the seasons, and assess physical and chemical factors that may drive changes in net processing. The mass balances analysis revealed distinct patterns in net uptake among N forms. Notably, there was clear evidence of NH4-N and DON uptake (removal) in the stream, while NO3-N processing patterns showed neither clear uptake nor production. Further, variation in net uptake for NH4-N and DON was positively related to stream DOC, DOC:DIN, and C:N ratios, indicating that carbon rich conditions promoted greater N demand in this ecosystem. By comparison, variations in net NO3-N uptake or production at the reach scale were only weakly correlated with these carbon rich conditions. Finally, I assessed these patterns within the nutrient processing domains (NPDs) framework to characterize the behavior/character of the study reach. Accordingly, during the open water season, the stream reach acted mostly as a consumer for both NH4-N and DON, while on many dates it acted as a weak enhancer for NO3-N. These findings contribute to the broader understanding of N dynamics in boreal stream ecosystems and emphasize the complex interplay among organic and inorganic N forms, carbon dynamics, and nutrient processing in these environments. This knowledge is crucial for effective environmental management and conservation efforts in the region.