Thesis (M.S.)--Rutgers University, 2009. / "Graduate Program in Computer Science." Includes bibliographical references (p. 60-63).

Thesis (Ph.D.)--Brown University, 2008. / Vita. Advisor : Roberto Tamassia.

Thesis (M.S.)--Virginia Polytechnic Institute and State University, 1991. / Vita. Abstract. Includes bibliographical references (leaves 74-76). Also available via the Internet.

Thesis (Ph. D.)--Rutgers University, 2007. / "Graduate Program in Computer Science." Includes bibliographical references (p. 156-165).

Thesis (Ph. D.)--Rutgers University, 2007. / "Graduate Program in Computer Science." Includes bibliographical references (p. 70-73).

Thesis (Ph. D.)--Rutgers University, 2008. / "Graduate Program in Computer Science." Includes bibliographical references (p. 111-115).

Thesis (M. Eng.)--Carleton University, 1992. / Also available in electronic format on the Internet.

Thesis (M. S.)--University of North Carolina at Greensboro, 2006. / Title from PDF title page screen. Advisor: Shanmugathasan Suthaharan ; submitted to the Dept. of Mathematical Sciences. Includes bibliographical references (p. 33-34)

This thesis investigates the use of Bayesian Networks (BNs), augmented by the Dynamic Discretization Algorithm, to model a variety of clinical problems. In particular, the thesis demonstrates four novel applications of BN and dynamic discretization to clinical problems. Firstly, it demonstrates the flexibility of the Dynamic Discretization Algorithm in modeling existing medical knowledge using appropriate statistical distributions. Many practical applications of BNs use the relative frequency approach while translating existing medical knowledge to a prior distribution in a BN model. This approach does not capture the full uncertainty surrounding the prior knowledge. Secondly, it demonstrates a novel use of the multinomial BN formulation in learning parameters of categorical variables. The traditional approach requires fixed number of parameters during the learning process but this framework allows an analyst to generate a multinomial BN model based on the number of parameters required. Thirdly, it presents a novel application of the multinomial BN formulation and dynamic discretization to learning causal relations between variables. The idea is to consider competing causal relations between variables as hypotheses and use data to identify the best hypothesis. The result shows that BN models can provide an alternative to the conventional causal learning techniques. The fourth novel application is the use of Hierarchical Bayesian Network (HBN) models, augmented by dynamic discretization technique, to meta-analysis of clinical data. The result shows that BN models can provide an alternative to classical meta analysis techniques. The thesis presents two clinical case studies to demonstrate these novel applications of BN models. The first case study uses data from a multi-disciplinary team at the Royal London hospital to demonstrate the flexibility of the multinomial BN framework in learning parameters of a clinical model. The second case study demonstrates the use of BN and dynamic discretization to solving decision problem. In summary, the combination of the Junction Tree Algorithm and Dynamic Discretization Algorithm provide a unified modeling framework for solving interesting clinical problems.

One of the hardest challenges in building a realistic Bayesian network (BN) model is to construct the node probability tables (NPTs). Even with a fixed predefined model structure and very large amounts of relevant data, machine learning methods do not consistently achieve great accuracy compared to the ground truth when learning the NPT entries (parameters). Hence, it is widely believed that incorporating expert judgment or related domain knowledge can improve the parameter learning accuracy. This is especially true in the sparse data situation. Expert judgments come in many forms. In this thesis we focus on expert judgment that specifies inequality or equality relationships among variables. Related domain knowledge is data that comes from a different but related problem. By exploiting expert judgment and related knowledge, this thesis makes novel contributions to improve the BN parameter learning performance, including: • The multinomial parameter learning model with interior constraints (MPL-C) and exterior constraints (MPL-EC). This model itself is an auxiliary BN, which encodes the multinomial parameter learning process and constraints elicited from the expert judgments. • The BN parameter transfer learning (BNPTL) algorithm. Given some potentially related (source) BNs, this algorithm automatically explores the most relevant source BN and BN fragments, and fuses the selected source and target parameters in a robust way. • A generic BN parameter learning framework. This framework uses both expert judgments and transferred knowledge to improve the learning accuracy. This framework transfers the mined data statistics from the source network as the parameter priors of the target network. Experiments based on the BNs from a well-known repository as well as two realworld case studies using different data sample sizes demonstrate that the proposed new approaches can achieve much greater learning accuracy compared to other state-of-theart methods with relatively sparse data.