The D1-class receptors (D1R, D5R) each possess distinct signaling characteristics; however, pharmacological selectivity between them remains elusive. The third intracellular loops (IL3) of D1R and D5R harbour divergent residues that may contribute to their individual signalling phenotypes. Here we probe the function of central region of IL3 of D1R and D5R using deletion mutagenesis. Radioligand binding and whole cell cAMP assays suggest that the N-terminal and C-terminal moieties of the central IL3 oppositely contribute to the constitutive and agonist-dependant activity of D1-Class receptors. Whereas the N-terminal deletions ablated constitutive activity and decreased DA-induced activation, C-terminal deletions induced robust increases. These data, interpreted in concert with structural predictions generated from homology modeling implicate the central IL3 as playing an important role in the activation and subtype-specific characteristics of the D1-class receptors. This study may serve as a basis for the development of novel drugs targeting the central IL3 region.

The focus of this thesis is the dynamical behaviour of linear arrays of laser oscillators with nearest-neighbour coupling. In particular, we study how laser dynamics are influenced by laser-coupling strength, $\kappa$, the natural frequencies of the uncoupled lasers, $\tilde{\Omega}_j$, and the coupling between the magnitude and phase of each lasers electric field, $\alpha$. Equivariant bifurcation analysis, combined with Lyapunov exponent calculations, is used to study different aspects of the laser dynamics. Firstly, codimension-one and -two bifurcations of relative equilibria determine the laser coupling conditions required to achieve stable phase locking. Furthermore, we find that global bifurcations and their associated infinite cascades of local bifurcations are responsible for interesting locking-unlocking transitions. Secondly, for large $\alpha$, vast regions of the parameter space are found to support chaotic dynamics. We explain this phenomenon through simulations of $\alpha$-induced stretching-and-folding of the phase space that is responsible for the creation of horseshoes. A comparison between the results of a simple {\it coupled-laser model} and a more accurate {\it composite-cavity mode model} reveals a good agreement, which further supports the use of the simpler model to study coupling-induced instabilities in laser arrays. Finally, synchronisation properties of the laser array are studied. Laser coupling conditions are derived that guarantee the existence of synchronised solutions where all the lasers emit light with the same frequency and intensity. Analytical stability conditions are obtained for two special cases of such laser synchronisation: (i) where all the lasers oscillate in-phase with each other and (ii) where each laser oscillates in anti-phase with its direct neighbours. Transitions from complete synchronisation (where all the lasers synchronise) to optical turbulence (where no lasers synchronise and each laser is chaotic in time) are studied and explained through symmetry breaking bifurcations. Lastly, the effect of increasing the number of lasers in the array is discussed in relation to persistent optical turbulence.

Camera based navigation is getting more and more popular and is the often the cornerstone in Augmented and Virtual Reality. However, navigation systems using camera are less accurate during fast movements and the systems are often resource intensive in terms of CPU and battery consumption. Also, the image processing algorithms introduce latencies in the systems, causing the information of the current position to be delayed. This thesis investigates if a camera and an IMU can be fused in a loosely coupled Extended Kalman Filter to reduce these problems. An IMU introduces unnoticeable latencies and the performance of the IMU is not affected by fast movements. For accurate tracking using an IMU it is important to estimate the bias correctly. Thus, a new method was used in a calibration step to see if it could improve the result. Also, a method to estimate the relative position and orientation between the camera and IMU is evaluated. The filter shows promising results estimating the orientation. The filter can estimate the orientation without latencies and can also offer accurate tracking during fast rotation when the camera is not able to estimate the orientation. However, the position is much harder and no performance gain could be seen. Some methods that are likely to improve the tracking are discussed and suggested as future work.

Bacteriorhodopsin (bR) is a 7TM membrane protein expressed in Halobacterium salinarum. Due to its stability and high expression levels, bR serves as a model for other 7TM membrane proteins. Neurotensin receptor 1 (NTS1) is a member of pharmacologically relevant G protein-coupled receptor superfamily, and is the high affinity receptor for neurotensin, a 13mer peptide that can be found in the brain, gut, and central nervous system. NTS1 is a target for Parkinson’s, Schizophrenia, and drug addiction. This thesis aims to develop pulsed magnetic resonance techniques and sample preparation forms for high resolution structural studies on 7TM proteins. In this thesis, pulsed dipolar distance electron paramagnetic resonance (EPR) methods for the study of proteins in their native membrane are established. bR is spin-labeled, and a wellresolved distance distribution is measured in excellent agreement with other structural data. Preliminary distance data for a photoexcited state of bR suggests quaternary rearrangements in the native membrane that are agreement with published AFM results. A fitting method is developed to enable measurements of systems with rapid signal decay, a common feature in reconstituted systems studied by pulsed EPR methods. A physical chemical characterization of nanosized-bilayer discs termed Lipodisqs®, and the successful incorporation of bR is presented. Lipodisqs® are formed from DMPC and a polymer that is able to solubilize DMPC vesicles into discrete particles. Lipodisqs® possess a broad phase transition with increased lipid ordering compared to a DMPC dispersion. The SMA polymer interacts with the lipid tails, but does not perturb the headgroup. BR is incorporated in the monomeric form, and EPR dynamic and distance measurements confirm that Lipodisqs® preserve the native structure of bR, whilst detergent solubilisation increases the overall mobility compared to bR in its native membrane, suggesting that Lipodisqs® serve as an excellent medium for EPR studies on 7TM membrane proteins. A cysteine-depleted mutant of active, ligand binding NTS1 is constructed. Cysteines are reintroduced at positions that may be able to monitor agonist and inverse-agonist induced conformational and dynamic changes. A spin-labeling protocol is developed, and preliminary EPR measurements are discussed. Dynamic nuclear polarization (DNP) results are presented with uniformly-¹³C-labelled bR in the PM, resulting in a DNP enhancement of 16 using the biradical nitroxide polarizing agent, TOTAPOL. DNP-enhanced solid state NMR (ssNMR) is typically carried out at cryogenic temperatures, resulting in poor spectral resolution compared to ambient temperatures. Two different forms of samples are prepared that could potentially lead to better-resolved DNP spectra. BR is reverse labelled by adding natural abundance amino acids to isotopically labelled growth medium, resulting in the partial depletion of resonance signals that may obscure and crowd the NMR spectra. A crystalline sample of bR is prepared using the LCP method for crystallization, which is to date the most successful method for the crystallization of GPCRs. In summary, the first pulsed dipolar measurements of a protein in its native membrane are shown, Lipodisqs® are characterized and found to be a suitable medium for structural and functional studies of 7 TM membrane proteins, the first preliminary EPR studies on a ligand binding GPCR are presented, and novel sample preparation techniques are developed for the nitroxide-based DNP enhancement of ssNMR data. This thesis opens up several avenues for future research into 7TM membrane proteins.

No description available.

In this thesis, we investigate the collective electron dynamics in single and coupled superlattice systems under the influence of a DC electric field. Firstly, we illustrate that Bloch oscillations suppress electron transport and the resulting charge domains form self-sustained current oscillations. Upon the application of a tilted magnetic field, stochastic web structures are shown to form in the phase space of the electron trajectory. This occurs only when the Bloch and cyclotron frequencies are commensurate allowing the electrons to demonstrate chaotic unbounded trajectories, leading to an increase in transport. The charge domain dynamics also present additional peaks during such resonances. The rapid changes in the dynamical states found is an example of non-KAM chaos. We show then the amplitude and frequency of current oscillations in a single superlattice can be controlled. Secondly, two models are designed to mutually couple two semiconductor superlattices by a common resistive load. We examine the effects of coupling strength and frequency detuning on the collective current dynamics. The devices are considered to be arranged together on a single substrate as well as on individual substrates. Large AC power is witnessed during anti-phase and in-phase synchronization between current oscillations. Finally, two superlattices are coupled through a resonance circuit incorporating single mode resonances from external influences in the circuit. In this system, chaotic current dynamics are induced with regions of chaos separating different regions of synchronization. High frequency oscillations with minimal phase difference cause the largest power generation. In all three coupling models high frequency components are found in the Fourier power spectra. The power generated in the coupled systems is found greater and at times more than double the power generated in the autonomous superlattice. Thus this thesis provides innovative methods of enhancing and controlling powerful high-frequency signals. This effectively gives manipulation over the intensity of the electromagnetic radiation produced by the superlattice.

This thesis presents the results and discussion of the investigation of the effects of Brönsted bases on the kinetics and thermodynamics of two proton-coupled electron transfer processes: the mediated oxidation of glutathione and the electrochemical oxidation of hydroquinone. Proton-coupled electron transfer (PCET) is the name given to reactions that involve the transfer of electron(s) accompanied by the exchange of proton(s). PCETs are found in many chemical and biological processes, some of current technological relevance such as the oxygen reduction reaction in fuel cells, which involves the transfer of four electrons and four protons (4e-, 4H+); or the splitting of water into protons (4H+), electrons (4e-) and oxygen (O2) efficiently achieved in photosynthesis. The study of PCET mechanisms is imperative to understanding biological processes as well as to developing more efficient technological applications. However, there are still many unanswered questions regarding the kinetic and thermodynamic performance of PCETs, and especially about the effect of different proton acceptors on the rate and mechanism of PCET reactions. This study aimed to investigate the effect of Brönsted bases as proton acceptors on the kinetics and thermodynamics of two model PCET processes, the oxidation of glutathione and hydroquinone. The analysis presented in this thesis provides insight into the influence of different proton acceptors on the mechanism of PCET and it does so by studying these reactions from a different angle, that one of the acid-base catalysis theory which has been successfully applied to the investigation of numerous chemical reactions coupled to proton transfer. We hope future research of PCETs can benefit from the knowledge of acid-base catalysis to better understand these reactions at a molecular level.

The discovery that bile acids act as endogenous ligands of the membrane receptor TGR5 and the nuclear receptor FXR increased their significance as regulators of cholesterol, glucose and energy metabolism. Activation of TGR5, expressed on enteroendocrine L cells, by bile acids caused secretion of GLP-1, which stimulates insulin secretion from pancreatic β cells. Expression of TGR5 on pancreatic islet cells and the direct effect of bile acids on the endocrine functions of pancreas, however, are not fully understood. The aim of this study was to identify expression of TGR5 in pancreatic islet cells and determine the effect of bile acids on insulin secretion. Expression of TGR5 was identified by quantitative PCR and western blot in islets from human and mouse, and in α (αTC1-6) and β (MIN6) cells. Release of insulin, glucagon and GLP-1 were measured by ELISA. The signaling pathways coupled to TGR5 activation were identified by direct measurements such as stimulation of G proteins, adenylyl cyclase activity, PI hydrolysis and intracellular Ca2+ in response to bile acids; and confirmed by the use of selective inhibitors that block specific steps in the signaling pathway. Our studies identified expression of TGR5 receptors in β cells and demonstrated that activation of these receptors by both pharmacological ligands (oleanolic acid (OA) and INT-777) and physiological ligand (lithocholic acid, LCA) induced insulin secretion. TGR5 receptors are also expressed in α cells and, activation of TGR5 by OA, INT-777 and LCA at 5 mM glucose induced release of glucagon, which is processed from proglucagon by the selective expression of prohormone convertase 2 (PC2). However, under hyperglycemia, activation of TGR5 in α cells augmented the glucose-induced increase in GLP-1 secretion, which in turn, stimulated insulin secretion. Secretion of GLP-1 from α cells reflected TGR5-mediated increase in PC1 promoter activity and PC1 expression, which selectively converts proglucagon to GLP-1. The signaling pathway activated by TGR5 to mediate insulin and GLP-1 secretion involved Gs/cAMP/Epac/PLC-ε/Ca2+. These results provide insights into the mechanisms involved in the regulation of pancreatic α and β cell function by bile acids and may lead to new therapeutic avenues for the treatment of diabetes.

G protein-coupled receptors (GPCRs) are heptahelical, transmembrane proteins that mediate a plethora of physiological functions by binding ligands and releasing G proteins that interact with downstream effectors. GPCRs signal as monomers, complexes of the same receptor subtype (homomers), or complexes of different receptor subtypes (heteromers). Recently, heteromeric GPCR complexes have become attractive targets for drug development since they exhibit distinct signaling and cell-specific localization from their homomeric counterparts. Yet, the effect of heteromerization on the pharmacology of many GPCR homomers remains unknown. Therefore, we have undertaken the task to examine the effect of heteromerization on Gs signaling through the adenosine 2A receptor (A2AR) and Gi signaling through the dopamine type 2 receptor (D2R) since the A2AR-D2R heteromer is an emerging therapeutic target for Parkinson’s disease (PD). We examined the effect of heteromerization on A2AR and D2R homomeric signaling using electrophysiology and the Xenopus laevis oocyte heterologous expression system. G protein-coupled inwardly rectifying potassium channels (GIRKs) were used as reporters for Gi signaling because activation leads to direct Gbeta-gamma (Gβγ)-mediated stimulation of the GIRK current. We also coupled GIRK channels to Gs signaling by overexpressing Gαs and signaling throughGαsβγ. Our electrophysiological assay is innovative because it allows us to optimize the conditions of heteromerization and directly observe GPCR signaling at the G protein level. Our data demonstrate that heteromer formation alone decreases dopamine-elicited Gi signaling through the D2R and CGS-21680-elicited Gs signaling through the A2AR. Furthermore, this reciprocal antagonism was predominately due to changes in efficacy versus potency. We also examined crosstalk observing that applying agonists or antagonists to the adjacent receptor further modulate this inhibition with the combination of agonists and antagonists relieving inhibition. Mutating the A2AR-D2R heteromer interface abrogated all of the aforementioned ligand-induced effects on G protein signaling through the A2AR-D2R heteromer. We are currently aiming to validate our results from the oocyte experiments with an in vivo model. Our data further elucidate the effect of various ligands on G protein signaling through the A2AR- D2R heteromer, which may facilitate future studies that examine A2AR-D2R heteromer signaling.

Charles university in Prague, Pharmaceutical faculty in Hradci Králové, Department of biological and medical sciences Rheinische Friedrich-Wilhelms-University Bonn, Institute of Pharmacology and Toxicology Candidate: Michaela Čajková Supervisor: PharmDr. Miroslav Kovařík, Ph.D. Consultant: Dr. Linda Sarah Hoffmann Title of diploma thesis: Role of Gq-coupled receptors in brown adipocytes In my diploma thesis, we focused on four Gq-coupled receptors (F2R, LPHN1, α1DAR, TSHR) in brown adipocytes (BAs), which were identified in the screen as the highest expressed in immature and mature BAs. Our goal was to validate suggestion, that Thyroid stimulating hormone receptor (TSHR) plays a key role in differentiation of BAs and that F2R, LPHN1, α1D-AR might be important for BAs. In our study, we investigated gene expression of these four receptors in BAs, using analytical methodsquantitative reverse-transcriptase polymerase chain reaction (qRT-PCR) and Western blot. Results from analysis revealed, that expression of TSHR was increased in mature BAs, it means, that TSHR induce differentiation of BAs. The BAs transduced with short hairpin RNA (sh-RNA) against TSHR were less differentiated, this we proved also with Oil Red-O staining. Expression of adipocyte Protein 2 (aP2), peroxisome proliferator-activated...