Diagnosis of acute pancreatitis (AP) is erroneous in up to one third of patients when based on clinical criteria and elevated serum amylase values. Furthermore, according to autopsy reports fatal pancreatitis remains clinically undiagnosed in 22 to 86 % of hospitalised patients. Consequently, search for better methods for the diagnosis of AP seems not only justified but urgent. The pancreas secretes an nonspecific lipase, the carboxylic ester hydrolase (CEH) with molecular properties different from other pancreatic secretory enzymes. These differences may imply that sites and rates of clearances from blood of pancreatic enzymes differ. Except for the pancreas this enzyme is secreted from the lactating mammary gland with milk. A sensitive and reproducible sandwich-ELISA for quantitative determination of CEH was developed. When establishing referent values it was noted that in individuals aged 20 to 65 years serum concentrations of CEH did not depend on age, gender, the time of the day or duration from food intake to blood sampling, or use of nicotine. The mammary gland did not contribute significantly to basal serum levels of CEH; enzyme levels in lactating women or women with mammary tumours were identical to those of the reference population. Seventy percent of patients with the diagnosis AP, based on elevated serum amylase levels and abdominal pain, had elevated CEH values. Among the patients with elevated amylase alone a probable cause of pancreatitis was lacking in the majority of patients. Contrastingly, a likely cause of AP could be identified in all patients presenting with abdominal pain and elevated CEH levels alone. These findings suggested that an elevated CEH level indicated AP more reliably than an elevated amylase level. In patients with AP diagnosed by contrast enhanced computed tomography (CECT) alone, or combined with histopathological diagnosis, serum CEH levels were elevated on admission in all but one patient, and in all within the next 24 h. Furthermore, in patients with severe pancreatitis CEH levels remained at a raised level from the second to at least the 10:th day following admission, whereas a significant decrease was noted in patients with mild pancreatitis. In contrast, serum amylase values were higher in patients with mild pancreatitis during the observation period than in those with severe pancreatitis. CEH levels were higher in patients with three or more Ranson signs than in those with less than three signs from the first day after admission. CEH levels were within referent range in 164 patients without known pancreatic disease admitted due to abdominal emergency conditions, or due to planned surgery for chronic extrapancreatic gastrointestinal diseases, and 16 patients having CECT without pathological findings in the pancreas. This suggests that AP can be excluded with very high degree of probability in presence of non-elevated CEH levels. A sandwich ELISA for determination of Guinea pig CEH and a model for graded pancreatitis in the same species were developed. CEH levels showed proportional to severity of inflammation, thus confirming previous clinical observations. CEH levels in bile were proportional to inflammation, while it was absent in urine. Amylase levels in urine were identical regardless of severity of inflammation, but low in bile. These results suggested differences in sites and rates of clearance between the two enzymes. Seemingly elevated CEH levels allowed identification of clinically significant pancreatitis following ERCP, which amylase levels did not. The presented studies have shown that quantitative determination in serum of CEH by the described method is a more reliable test for the diagnosis of AP than determination of amylase activity. The differences between CEH and amylase are, at least partly, due to differences in molecular properties determining rates and routes of clearances of the two enzymes from serum. / <p>Diss. (sammanfattning) Umeå : Umeå universitet, 1994, härtill 5 uppsatser.</p> / digitalisering@umu.se

Les enzymes lipolytiques sont des ester hydrolases impliquées dans le métabolisme lipidique. Leurs caractéristiques se sont révélées être des atouts dans de nombreuses applications industrielles. Chez les microalgues, l’isolement et la caractérisation de ces enzymes d’un point de vue structural et fonctionnel restent des domaines de recherche peu explorés à ce jour.Certaines espèces bénéficient pourtant de contenus en lipides intéressants, source de matière première pour les industries de l’agroalimentaire ou de l’énergie. Par exemple, l’acide docosahexaénoique (DHA), un acide gras polyinsaturé de la série des omégas 3, est reconnu pour ses propriétés en santé humaine. Parmi de nombreuses espèces, Isochrysis galbana, une microalgue unicellulaire appartenant à la classe des Prymnesiophycées est considérée comme une source possible de DHA. La présence d’acides gras libres a été montrée par l’analyse des lipides, suggérant la présence d’enzymes lipolytiques potentiellement intéressantes pour leur sélectivité et leur spécificité de substrat.L’analyse d’une banque de marqueurs de séquences exprimées a permis l’identification de séquences susceptibles de coder des enzymes lipolytiques. Les ARN messagers ont été extraits et les ADN complémentaires ont été clonés.Ce travail de thèse présente l’analyse et le clonage de deux gènes codant une ester hydrolase putative et une thioestérase putative, issues de la microalgue Isochrysis galbana.Les deux séquences codent des protéines de poids moléculaires de 35,41 kDa et de 42,31 kDa. Elles montrent 30 à 40 % d’identité et de similarité avec des hydrolases notamment des carboxylestérasesde différents organismes. Les séquences protéiques ont permis l’identification du pentapeptide consensus Gly-X-Ser-X-Gly caractéristique des enzymes lipolytiques et les acides aminés Ser/Asp/His de la triade catalytique.Les deux séquences codantes ont été clonées et exprimées dans la levure Saccharomyces cerevisiae et la bactérie Escherichia coli. Le clonage dans E. coli a permis d’identifier à la taille attendue une protéine par Western blot. En présence de cette protéine, la composition en acides gras des lipides de la bactérie a été modifiée. L’analyse CPG a notamment montré une augmentation des proportions en acides gras C16 :1 et C18 :1 par rapport au témoin. Ce résultat permet de caractériser l’activité thioestérase pour IgTeCe. / Lipolytic enzymes present in all known species play a key role in lipid metabolism and are involved in several industrial processes. They catalyse lipid hydrolysis and synthesis. Actually and particularly in microalgae, isolation and characterization of this type of enzyme remains an unexplored research area.The potential of the lipidic content of microalgae in food industry or energy field requires specific lipolytic enzymes. Docosahexaenoic acid (DHA), an 3 poly insaturated fatty acid (3 PUFA) is well known for its beneficial effects on human health. Among many species, Isochrysis galbana, a unicellular marine microalga belonging to the Prymnesiophyceae class, is considered as a potential alternative source of DHA.Lipid analysis of I. galbana shows free fatty acids and suggests the presence of lipolytic enzymes with potential interesting selectivities and substrate specificities. Analysis of incomplete expressed sequence tag (EST) listed in the EST bank of Isochrysis galbana, identified incomplete genes that encode lipolytic enzymes. Messenger RNAs were extracted, characterized and cloned.This work describes the analysis and cloning of two genes encoding a putative ester hydrolase and a putative thioesterase in marine microalgae Isochrysis galbana. Sequences encode two proteins with predicted molecular weights of approximately 35,41 kDa and 42,31 kDa. Slight similarity and identity (from 30 to 40 %) were observed between the gene sequence and various  fold hydrolase found in diverse phyla (including carboxylesterase).Sequences also included the consensus Gly-X-Ser-X-Gly and the catalytic triad Ser/Asp/His. To characterize the predicted enzymatic functions, an experimental procedure was introduced: coding sequences were cloned into expression vectors and expressed in Saccharomyces cerevisiae and in Escherichia coli.Western blot identification of recombinant enzyme shows a convenient protein production in bacteria. Furthermore, the expression of the protein in E. coli shifted the fatty acid composition predominantly towards C16:1 and C18:1 fatty acids. The enzyme called IgTeCe showed a thioesterase activity.

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Soils contain highly diverse consortia of bacteria making them very attractive starting points for both culture-dependent and metagenomic discovery efforts. The present diploma thesis analyses the composition of the microbial community from pharmaceutically polluted soil, with the employment of next-generation Illumina sequencing of 16S rDNA region. This analysis revealed high complexity of the soil microbial environment and confirmed that anthropogenic activity (represented by production of beta- lactam antibiotics) influences the variability and abundance of the species, yet without reducing the microbial diversity. In the second part of the thesis, isolation and heterologous expression of a novel gene encoding alpha-amino acid ester hydrolase (AEH) from a cultivable soil microorganism B. cereus is described. AEHs possess industrial potential for biocatalytic synthesis of semi-synthetic beta-lactam antibiotics, which are presently of great clinical importance. Powered by TCPDF (www.tcpdf.org)

On the chromosomal DNA of the microorganism Achromobacter sp. CCM 4824, which was gained in the Laboratory of enzyme technology MBU AVCR v.v.i., there was identified a gene coding an enzyme capable of hydrolyzation of semi-synthetic β-lactam antibiotics ampicillin and cephalosporin with a D-phenylglycine as a side chain. This enzyme belongs to a group of α-amino acid esterases, which are interesting because of a potential use in kinetically controled synthesis of β-lactam antibiotics. In several aspects α-amino acid esterases might be better than actually used penicillin acylases and that is why these enzymes are subjects of a big interest. The gene for α-amino acid esterase coded by chromosomal DNA was cloned, characterized and heterologously expressed in constructed highly-producing bacterial system Escherichia coli BL21(DE3)JM5. Produced enzyme was purified and its properties important for possible use in the production of semi-synthetic β-lactam antibiotics were determined. Key words: alpha-amino acid ester hydrolase, Achromobacter sp., recombinant expression system, β-lactam antibiotics