The aim of this diploma thesis was to study the role of posttranslational modifications of phosducin and their role in the interaction with the 14-3-3 protein as well as the influence of the complex formation on these modifications. Phosducin is a 33kDa protein commonly present in photoreceptor cells of the retina as well as other tissues. Despite many experiments, its physiological functions are still elusive. It has been speculated that fosducin plays an important regulatory role in visual phototransduction pathway, regulation of blood pressure and expression of G-proteins. The phosducin function is regulated through binding to the 14-3-3 protein, a regulatory protein involved in many biochemical processes. Phosducins binding to 14-3-3 protein requires phosphorylation of two serine residues Ser-54 and Ser-73 within the N-terminal domain of phosducin. However, the role of the 14-3-3 protein binding in the regulation of phosducin function is still unclear. In this diploma thesis proteins 14-3-3ζ∆C and phosducin (mutation Q52K) were successfully expressed and purified. The effect of the complex formation on phosducin posttranslational modifications was investigated using limited proteolysis and dephosphorylation. These experiments revealed that the complex formation significantly slowed down both...

Spermatozoa of externally fertilizing fish species after releasing into aqueous environment are particularly vulnerable to damage mainly due to alterations in composition of media surrounding sperm. Among factors affecting spermatozoa movement in external medium are water pollutants, temperature, pH and osmotic conditions. The goal of this thesis was to investigate the possible effects of oxidative stress on sperm performance and intracellular signaling, particularly the effect of pollutants occurring in water environment. In addition the molecular mechanisms of stress response and motility activation for spermatozoa of several freshwater fish species were analyzed. Our results show that xenobiotics, such as vinclozolin, induce a dose-dependent reduction in sterlet (Acipenser ruthenus) spermatozoa motility and velocity at environmentally relevant concentrations. Increased levels of lipid oxidation (LO) and protein carbonylation (CP), as well as changes in antioxidant activity of superoxide dismutase (SOD) indicate the development of an oxidative stress in spermatozoa exposed to xenobiotic. Moreover, increased DNA fragmentation as well as a reduction of the level of ATP was observed in spermatozoa incubated with xenobiotic in vitro. These results demonstrated that sterlet spermatozoa are highly susceptible to the presence of pollutants, which induce excessive ROS production even at low concentrations. Further studies were performed in order to evaluate the role of ROS production in fish sperm and protective properties of seminal plasma. The ROS were generated in carp (Cyprinus carpio L.) spermatozoa by in vitro incubation with xanthine - xanthine oxidase system (X-XO). A time- and dose-dependent reduction in spermatozoa motility and velocity was observed as well as increased LO, CP and DNA fragmentation. Moreover, it was shown that O-linked N-acetylglucosamine transferase and septin-8-A changed their phosphorylation state on tyrosine residue, and acid phosphatase activity decreased in response to oxidative stress. On the other hand, catalase (CAT), superoxide dismutase (SOD), and glutathione (GTH) in combination with seminal plasma can reduce oxidative stress in carp spermatozoa and improve sperm quality. Our next study was applied to determine how the protein phosphorylation pattern changed after motility activation in carp and sterlet spermatozoa, where phosphorylated proteins are located in spermatozoon and to identify proteins involved in sperm motility. It was shown that the pattern of protein phosphorylation and their localization differs significantly between two species. Phosphorylation on serine and tyrosine residues, as well as protein kinase A (PKA) and protein kinase C (PKC) substrates play an important role in spermatozoa motility activation and regulation in both species. Numerous signaling proteins involved in carp and sterlet spermatozoa movement were identified in this study, giving a better understanding of molecular mechanisms underlying sperm motility. As a conclusion, the results of this study provide new data on the effect of xenobiotics and oxidative stress on fish spermatozoa motility, DNA integrity, lipid and protein oxidation, antioxidant defense system and intracellular signaling. These data proved the toxicity of water pollutants and ROS for fish spermatozoa and proposed the use of CAT, SOD, or GTH in combination with seminal plasma to reduce oxidative stress in these cells. Moreover, we identified many spermatozoa proteins involved in stress response and motility. In practice, the data presented in this thesis could be useful for elaboration of suitable medium for cryopreservation and artificial propagation of freshwater fish species.

Regulation of penicillin-binding protein Pbp2a in Streptococcus pneumoniae Streptococcus pneumoniae is an extracellular human pathogen that encodes a unique eukaryotic-type Ser/Thr protein kinase StkP in its genome. This enzyme is involved in other cellular processes, such as cell division and cell wall synthesis, through phosphorylation with its substrates. A transmembrane protein MacP has been identified as a substrate of StkP. It is an activator of penicillin-binding protein PBP2a, which is involved in the synthesis of peptidoglycan with its transpeptidase and transglycosylase activities. We found that MacP is phosphorylated by the protein kinase StkP at positions T32 and T56. We confirmed that proteins MacP and PBP2a interact with each other and that phosphoablative and phosphomimetic mutations of the major phosphorylated residues of the MacP protein do not affect the interaction with PBP2a and do not fundamentally affect the function of MacP in vivo. Furthermore, we showed that the ∆macP mutation is synthethically lethal with the ∆pbp1a mutation, confirming that MacP is an activator of the PBP2a protein. MacP is located in the cell septum and interacts with a number of S. pneumoniae cell division proteins. Keywords: Streptococcus pneumoniae, cell division, MacP, PBP2a, phosphorylation

Phosphoenolpyruvate carboxylase (EC 4.1.1.31; PEPC) is one of the carbon dioxide- fixing enzymes, which yields oxaloacetate from phosphoenolpyruvate and bicarbonate. Regulation of PEPC activity occurs at many levels. In addition to pH and concentration of activators and inhibitors, it is phosphorylation as well. Phosphorylation of PEPC causes a change of kinetic parameters, such as maximal reaction rate, sensitivity to activation or inhibition. Considering that, there is still little information like this about C3 plants and that regulation is in various plant species different, I have dealt with monitoring of the kinetic parameters and regulation possibilities of PEPC isolated from C3 plant sources (Cannabis sativa L., Chenopodium quinoa, Pisum sativum L., Lens culinaris). While the activity of PEPC from leaves of Cannabis sativa L. was decreased by alkaline phosphatase, the activity of PEPC from seeds of Chenopodium quinoa, Pisum sativum L., Lens culinaris was not affected by alkaline phosphatase. The affinity of PEPC from seeds Chenopodium quinoa, Pisum sativum L., Lens culinaris to the substrate PEP was higher than in the case of PEPC from leaves of Cannabis sativa L.. For PEPC from Cannabis sativa L. was found that the apparent dephosphorylation leads to decrease of sensitivity to the...

Transport of proteins to the nucleus through a nuclear envelope is controlled mostly via nuclear localization signal (NLS). Nuclear localization signal is rich in positively charged amino acids arginine and lysine. It was observed that activity of this NLS could be regulated through a phosphorylation of serine in its close proximity. Either a phosphorylation of serine or phosphomimetic changes of these "presequences" could represent an important mechanism regulating a localization of protein in cells in relation to a cellular activation. In our laboratory was identified protein - Fragile X mental retardation syndrome 1 neighbor (Fmr1nb), whose cellular localization could be driven by this posttranslational modification.

AAbbssttrraacctt:: The mammalian organism is entirely dependent on ATP production by oxidative phosphorylation system (OXPHOS) on the inner mitochondrial membrane. OXPHOS is composed of respiratory chain complexes I-IV, ATP synthase and also include two electron transporters cytochrome c and coenzyme Q. Disorders of mitochondrial energy metabolism caused by OXPHOS defects are characterized by extreme heterogeneity of clinical symptoms, variability of tissues affected and the severity of the defect at the level of individual tissues. The mitochondrial disorders are not always clearly expressed at the level of available tissue or most easily available cultured fibroblasts and/or currently available methods are not capable to detect the defects on the fibroblasts level. The aim of this master thesis was to identify by biochemical methods, especially by high sensitive polarography, OXPHOS disorders in cultured fibroblasts. Cell lines from 10 patients with isolated (SURF21, SCO1 ND1, ND5) or combined defects of OXPHOS complexes whose biochemical defect was confirmed in muscle tissue as well as 14 patients with non- mitochondrial diseases (8 patients with Huntington disease, 6 patients with disorder of sulphur amino acids metabolism) were analysed. Furthermore impact of various cultivation conditions on OXPHOS...

Functional analysis of Spr1057 protein Streptococcus pneumoniae The genome of important human pathogen Streptococcus pneumoniae encodes a single gene of an eukaryotic type serine/threonine protein kinase StkP. Analysis of the global transcriptome of a mutant strain with inactivated stkP gene identified spr1057 gene whose expression was significantly repressed in ∆stkP strain. This gene is coding for Spr1057 protein which is a member of haloacid dehalogenase family. The analysis of the substrate specifity of the Spr1057 protein confirmed nucleotidase activity of this protein in vitro. To study the function of this protein in vivo we prepared several mutant S. pneumoniae strains. Growth characterictics of mutant strains were observed in the presence of modified nucleotides, 5-fluoro-2'-deoxyuridine (5-FdU) and 5-bromo-2'-deoxyuridine (5-BrdU). In addition, we monitored the rate of incorporation of 5-BrdU into the chromosomal DNA of the mutant strains in comparison with the wild type S. pneumoniae strain. The growth of the Δspr1057 strain was significantly inhibited in the presence of the modified nucleotides and increased incorporation of 5-BrdU in DNA was showed. Neither growth inhibition nor incorporation of 5-BrdU in DNA was observed for the wild type strain. The expression of an ectopic copy of spr1057...

Acute lymphoblastic leukemia (ALL) is the most common malignant dise- ase in children. Despite great advancements in treatment of this disease, around 15-20 % of patients suffer a relapse. One of the possible reasons for relapse is developed resistance to cytostatic drugs. L-asparaginase is an im- portant chemotherapy component for childhood ALL and resistance to this drug often complicates treatment. To date, causes of developing resistance have not been sufficiently described. This thesis is a part of a greater research project focusing on mechanisms of L-asparaginase's activity and reasons for developing resistance to this chemotherapeutic agent. Differential metabolic requirements of cancerous cells have been described as early as 1924 by O. H. Warburg and they have been subject to scientific inquiry since. This study aimed to describe the relationship between basal metabolic determinants of leukemia cells and their sensitivity to L-asparaginase. For this reason, two metabolic pathways, glycolysis and oxidative phosphorylati- on, were studied in detail using a Seahorse Bioanalyzer. Further, expression of specific genes involved in glycolysis was detected. Content of mitochon- drial reticulum in cells, expression of the asparagine synthetase gene, and cell size were also studied. Experiments were...

Spr0334, new protein of cell division in Streptococcus pneumoniae Streptococcus pneumoniae is an important human pathogen. The geonome of this bacteria encodes a single gene for eukaryotic-like serine / threonine protein kinase called StkP. StkP regulates many physiological processes such as pathogenesis, competence for genetic transformation, resistance to various stresses and resistance to antibiotics. It also affects the transcription of many genes involved in cell wall biosynthesis, pyrimidine metabolism, DNA repair and iron uptake. Recent studies have shown that StkP is located in the cell division septum and significantly regulates cell division and morphology. Its substrates include, among others, cell division protein DivIVA, FtsZ and FtsA. Analysis of phosphoproteome maps of wild type and ΔstkP mutant strain of S. pneumoniae showed that in vivo StkP phosphorylates several putative substrates including the protein Spr0334. Mass spectrometry analysis identified phosphorylation sites of the protein Spr0334: threonine 67 and threonine 78. Furthermore, it was found that the protein Spr0334 is located in the cell division septum, which led to the hypothesis that it could be newly identified cell division protein in S. pneumoniae. The main aim of this thesis was to describe the function of the...

Streptococcus pneumoniae encodes single serine/threonine protein kinase StkP and its cognate protein phosphatase PhpP. This signalling couple phosphorylates/dephosphorylates many target proteins involved in various cellular processes. So far, only few ot them was characterized in detail. Global phosphoproteomic analysis in the ∆stkP mutant strain background resulted in the identification of protein Spr0175 as phosphorylated on threonine 7. The main aim of this work was to characterize this new substrate. The ∆spr0175 mutant strains were prepared in the wild type genetic background Rx and R6 and then monitored for their growth and cell morphology. Mutant strains exhibited morphological defects revealing potential involvement of Spr0175 in the process of cell division. In the wild type D39 the deletion was unsuccesful, which may entail possible essentiality of Spr0175 in D39 strain. The results obtained also confirmed that the Spr0175 is modified in in vitro and in vivo conditions at threonine 7. In vitro study also confirmed minor phosphorylation at T4 residue. By using co-immunoprecipitation assay we demonstrated that Spr0175 protein can form oligomeric structures. Another aim of this work was cellular localization of Spr0175. By using fluorescent microscopy we showed that GFP-Spr0175 fusion...