The Dong research group is interested in harnessing the power of transition metal catalysis to transform simple molecules and reagents (such as carbon monoxide, hydrogen gas, olefins, and C–H and C–O bonds) into valuable products (such as functionalized heterocycles, chiral carbonyl compounds and natural products). This thesis will describe our continual effort to achieve this goal. Part I describes the Pd-catalyzed functionalization of sp2 and sp3 C–H bonds. Carbon monoxide is used as a stoichiometric reductant in the cyclization of diarylnitroalkenes to afford biologically relevant 3-arylindoles and other N-containing heterocycles with carbon dioxide as the only stoichiometric byproduct. Also, an aryl sulfoxide moiety is shown to direct the arylation of sp3 C–H bonds to afford beta-functionalized amides. Part II describes the Ru-catalyzed sp3 C–O bond activation of alkoxypyridines and related heterocycles. In this transformation, an O- to N-alkyl migratory rearrangement occurs to afford N-alkylated pyridones which are structures found in many natural products and pharmaceutical agents. Part III describes our pursuit of metal-catalyzed asymmetric synthesis. Readily available benzylic bromides are carbonylated with carbon monoxide in alcoholic solvent mixtures. The resulting medicinally relevant 2-arylpropionic esters are obtained with moderate to good enantioselectivities. Preliminary results for the asymmetric hydrogenation of gem-diarylethylenes and novel ligand development are also disclosed. Part IV describes our efforts towards the total synthesis of 6-deoxyerythronolide B. Our retrosynthetic analysis of the macrolide antibiotic involves disconnections at the lactone linkage and between C7 and C8. The two equally complex fragments were prepared via reliable aldol, hydroboration, crotylation and redox chemistry. Rather than the typical macrolactonization method to form the 14-membered ring, we propose an alternative strategy where we plan to cyclize with a metal-catalyzed ring-closing metathesis event. Currently, this step is under investigation by other members in the group.

The Dong research group is interested in harnessing the power of transition metal catalysis to transform simple molecules and reagents (such as carbon monoxide, hydrogen gas, olefins, and C–H and C–O bonds) into valuable products (such as functionalized heterocycles, chiral carbonyl compounds and natural products). This thesis will describe our continual effort to achieve this goal. Part I describes the Pd-catalyzed functionalization of sp2 and sp3 C–H bonds. Carbon monoxide is used as a stoichiometric reductant in the cyclization of diarylnitroalkenes to afford biologically relevant 3-arylindoles and other N-containing heterocycles with carbon dioxide as the only stoichiometric byproduct. Also, an aryl sulfoxide moiety is shown to direct the arylation of sp3 C–H bonds to afford beta-functionalized amides. Part II describes the Ru-catalyzed sp3 C–O bond activation of alkoxypyridines and related heterocycles. In this transformation, an O- to N-alkyl migratory rearrangement occurs to afford N-alkylated pyridones which are structures found in many natural products and pharmaceutical agents. Part III describes our pursuit of metal-catalyzed asymmetric synthesis. Readily available benzylic bromides are carbonylated with carbon monoxide in alcoholic solvent mixtures. The resulting medicinally relevant 2-arylpropionic esters are obtained with moderate to good enantioselectivities. Preliminary results for the asymmetric hydrogenation of gem-diarylethylenes and novel ligand development are also disclosed. Part IV describes our efforts towards the total synthesis of 6-deoxyerythronolide B. Our retrosynthetic analysis of the macrolide antibiotic involves disconnections at the lactone linkage and between C7 and C8. The two equally complex fragments were prepared via reliable aldol, hydroboration, crotylation and redox chemistry. Rather than the typical macrolactonization method to form the 14-membered ring, we propose an alternative strategy where we plan to cyclize with a metal-catalyzed ring-closing metathesis event. Currently, this step is under investigation by other members in the group.

Les substrats structurés aux échelles micrométriques et nanométriques sont intéressants pour des applications biomédicales, par exemple dans des puces à ADN/protéines, pour la miniaturisation des « lab-on-chip » ou pour préparer des implants permettant le contrôle de l'adhésion de cellules. Dans la dernière décennie des études ont montrées, que les cellules vivantes peuvent détecter la présence de nano-structures sur les substrats sur lesquels elles adhèrent. Bien que ces mécanismes soient étudiés depuis une dizaine d'années, les mécanismes fondamentaux sont encore en cours d'études. Tant pour une étude au niveau fondamental que dans le but d'applications concrètes, il est important de développer des techniques simples pour structurer des substrats sur de grandes surfaces. Nous avons réalisé une nouvelle méthode alliant un faible coût de fabrication et la biocompatibilité pour structurer et biofonctionnaliser des substrats à l'échelle nanométrique en utilisant des membranes d'alumine poreuses comme masque. Les membranes d'alumine poreuses, préparées par électrochimie, sont naturellement organisées en un réseau hexagonal sur une surface de quelques cm². Nous les utilisons comme masque pour la structuration de surfaces. Des trous réguliers sont gravés dans le substrat à travers les membranes d'alumine poreuses. Ce substrat est ensuite utilisée lors d'une application biologique : une bicouche lipidique est déposée sur le substrat structuré pour imiter les hétérogénéités de la membrane cellulaire. La mobilité de la bicouche est étudiée par corrélation de spectroscopie de fluorescence à rayon variable. Une autre série d'expériences est faite en utilisant des membranes d'alumine poreuses comme masque d'évaporation pour créer des réseaux organisés d'îlots d'organo-silanes. Deux molécules sont utilisées elles possèdent soit une fonction amine réactive soit une longue chaîne carbonée inerte. La bio-fonctionnalisation est ensuite effectuée en utilisant la fonction amine pour accrocher un anticorps. Des études sont effectuées en parallèle, sur des substrats bio-fonctionnalisés à l'échelle micrométrique grâce au micro-contact printing. Le but de cette étude est de mettre au point une biochimie de surface permettant le contrôle de l'adhésion de cellules immunitaires, avec le but de transférer ensuite la biochimie à l'échelle nanométrique. / Substrates patterned at the micro-scale and nano-scale are interesting for biomedical applications, for example, in DNA/protein nano-arrays, for miniaturized lab-on-chip applications or for making smart implants that can control adhesion of cells. In the last decade, some studies showed that living cells can detect nano-scale structures on substrates to which they adhere. Although this behaviour has been observed now for over a decade, the fundamental detection mechanism is still under investigation. Both for fundamental studies and for applications, it is important to develop facile techniques to pattern substrates on a large scale. We have realized a novel technique for patterning and bio-functionalizing substrates at the nano-scale using porous anodic alumina membranes as masks. The ordered porous anodic alumina membranes, prepared by classical electro-chemistry, are naturally organized in an hexagonal array over surface area of few square centimeters. Here we use them as mask for surface patterning. To create an array of nano holes, the substrate is dry etched through the alumina pores. In a biologically relevant application, a lipid bilayer is deposited on the patterned substrate to mimic a heterogeneous cell membrane. The mobility of the bilayer is studied by fluorescent correlation spectroscopy. In a different set of experiments, the porous alumina membranes are used as evaporation mask to create an organized array of alkyl-silane islands - either with a short carbon chain and with a reactive amine group or with a long carbon chain and non-reactive. Afterwards, biochemical functionalization is achieved by exploiting the amino-function of the amino-silane to bind an antibody. In parallel, we have started some studies of adhesion on a pattern substrate at micro-scale with immunological cells. The substrate is pattern by micro contact printing and the cell adhesion is observed by RICM. The aim of this studies is to prepare the biochemistry for the immunological cells adhesion, with the aim or transferring this to the nano-scale.