Presented thesis evaluates the risk of ongoing hybridization (antropohybridization) in highly endangered Prunus fruticosa in the Czech Republic and selected adjacent countries. Absolute genome size analysis (estimated by flow cytometry) combined with both numeric and geometric morphometrics were used for evaluation of hybridization. Prunus fruticosa frequently hybridize with naturalized Prunus cerasus (emerging tetraploid hybrid Prunus ×eminens) and native Prunus avium (forming triploid hybrid Prunus ×mohacsyana). Discrimination between P. ×eminens and P. ×mohacsyana is difficult, when using leaf morphology characters only, so the occurrence of triploid hybrids was strongly underestimated in the Czech Republic (only tetraploid hybrids were reported). Both hybrids are surely differentiated using flow cytometry analysis (based on different ploidy level). The majority of analyzed populations is formed by either individuals of pure P. fruticosa or one of the mentioned hybrids. Only four populations were mixed. Continuous variability in absolute genome size was found in two of them, which may indicate hybrid swarm forming (incl. primary hybrids and backcrosses). Our findings can be considered only as indirect evidence for introgression, which needs to be confirmed by molecular markers (for example...

Ligninolytic fungi are well known for their ability to degrade a wide range of xenobiotics contaminating the environment, including synthetic industrial dyes. In this work Pleurotus ostreatus was used for decolorization of a synthetic textile dye Remazol Brilliant Blue R (RBBR). To set up a model fungal "fixed-bed" bioreactor the fungus was immobilized on a polyurethane foam and artificially contaminated with a model bacterium Rhodococcus erythropolis. The development of bacterial contamination can be expected during a real application of fungal bio filters in wastewater treatment. The main aim of the work was to study interspecies interactions in the model bioreactors during the dye decolorization. Ligninolytic enzyme activities were followed in the bioreactor cultures as markers of fungal biodegradation ability. In contrast to the controls, no bacterial growth was observed in the P. ostreatus bioreactor culture liquid. The results showed that fungal laccase, pH of the culture liquid, and glucose consumption by the fungus had no effect on the bacterial growth. However, 4*105 - 1,3*106 CFU/ml of R. erythropolis was detected to be associated with the fungal solid support. The presence of these bacteria had no effect on the decolorization performance of the bioreactors. Dye decolorization efficiency...

A food web was constructed for a boreal-forest dominated national park in south-eastern Sweden, called Tyresta national park and its surrounding nature reserve. Due to increasing threats to mammalian species and their critical role in the food web mammals were used as the outset of the food web, and from there branching out to taxa trophically interacting with mammals directly and indirectly. The outset of the food web was constructed using available inventory data, focusing on mammals. From inventory data and 53 interaction sources, consisting of mostly primary literature a food web was created that includes 32 mammalian taxa, six bird families, five invertebrate taxa, fish, amphibians, fungi, reptiles, detritus and 9 different basal plant taxa. The results of the literature review was that the most consumed staple taxon of all were hexapods, with it being a staple food for 15 taxa, six of them being bats preying mainly on dipterans. There are a wide variety of ways that interspecific competition could come to affect taxa in the study area, for example through intraguild predation, increased dietary breadth or avoidance, or a combination of these. This method could serve as a complement to existing food webs or the construction of new ones in a cheaper, less intrusive and less time-consuming way, albeit missing local adaptations. The constructed food web structure and findings of interspecific competition in Tyresta can be used for further analyzing certain links or branching the web out even further, with increased depth or quantification of certain taxon.

The dark kangaroo mouse, Microdipodops megacephalus, is a sensitive species in the Great Basin Desert. This thesis explores the structure of desert rodent communities of the Great Basin to better understand M. megacephalus' place in the community and the conditions that promote large and stable populations. To determine community structure, I used nestedness analysis to evaluate 99 communities of nocturnal granivorous rodents. I found that the community structure was non-random, indicating the existence of assembly rules and ecological constraints. I also found that M. megacephalus was the second most vulnerable species in the community. To explore the correlation between species diversity and relative abundance, I performed regression analyses on M. megacephalus and five commonly co-occurring species of the nocturnal granivore guild: Perognathus longimembris (little pocket mouse), Perognathus parvus (Great Basin pocket mouse), Dipodomys ordii (Ord's kangaroo rat), Dipodomys microps (chisel-toothed kangaroo rat), and Peromyscus maniculatus (deer mouse). Results showed a positive correlation between rodent species diversity and relative abundance for M. megacephalus, P. longimembris, P. parvus, and D. microps, and a negative correlation for D. ordii and P. maniculatus. To further understand community composition, I ran interspecific association analyses based on presence-absence data for the six species using chi-square to determine strength of interspecific associations. I found positive interspecific associations between M. megacephalus and P. parvus, between P. longimembris and P. parvus, between P. longimembris and D. microps, and between D. microps and P. maniculatus, and a negative association between P. longimembris and P. maniculatus. A species cluster dendogram with respect to sites in common further supports the interspecific association results. A site cluster dendogram with respect to species abundances implies that dune habitat promotes diversity but not uniformity. All results indicate that M. megacephalus is more abundant and stable at sites with high species richness. The results also provide evidence for the existence of assembly rules, competition, and niche partitioning in desert rodent communities.

No description available.

Invasive plants can displace native species, deteriorate native forest, and change plant communities and ecosystem functions. Native plant populations are fundamentally impacted by invasive species because of the interactions between invasive species and native plants. This study focuses on understanding the extent, mechanisms and consequences of interaction between a non-indigenous invader Ailanthus altissima and its functionally similar native species Robinia pseudoacacia in the Mid-Appalachian region, from an individual scale to a regional scale. These two subject species are common and coexist in early-successional eastern deciduous forest. The interactions between these two common species are important to community structure and canopy tree regeneration. To address the type and extent of interactions of these two species, a greenhouse experiment utilizing various species proportions, nutrient levels and seed sources was performed. In addition, a common-garden experiment with various species densities and proportions over three consecutive growing seasons was performed in a more natural condition than that of the greenhouse experiment. We found at the seedling stage, the dominant interaction was competition, and R. pseudoacacia was the winner both above- and belowground. The allelopathic compounds of A. altissima may have inhibited nodulation of R. pseudoacacia. Ailanthus altissima seedlings from its native region had slightly stronger competitive abilities compared with the seedlings from its invaded range. In the common garden experiment, R. pseudoacacia plants grew quicker than A. altissima, but A. altissima inhibited the growth of R. pseudoacacia by interspecific competition. The negative impact of A. altissima on R. pseudoacacia became larger as time progressed. To assess the community-level consequences of the two species, we conducted a forest mapping and a complete target-tree-based forest survey, and analyzed regional-scale data from the Forest Inventory Analysis Data Base. The two target species were significantly associated with themselves and with each other. Community species composition and diversity were significantly different across sites. A negative impact of both species on the understory community diversity and tree regeneration at the neighborhood scale was detected; while at a regional level, tree diversity in the FIA plots with either A. altissima or R. pseudoacacia was higher than the reference plots. / Ph. D.

Introgression of genes from crops into ruderal populations is a multi-step process requiring sympatry, synchronous flowering, chromosomal compatibility, successful pollination and development of the zygote, germination, establishment and reproduction of hybrid progeny. The goal of this thesis was to generate data on as many steps in this process as possible and integrate them into a predictive statistical model to estimate the likelihood of successful introgression under a range of scenarios. Rape (Brassica napus) and wild turnip (B. rapa var. oleifera) were used as a model system. A homozygous dominant mutation in the rape genome conferring herbicide resistance provided a convenient marker for the study of introgression. Potential differences between wild turnip populations from a wide range of geographic locations in New Zealand were examined. Hand pollination established the genetic compatibility of rape and wild turnip and a high potential for gene introgression from rape to wild turnip. Interspecific hybrids were easily generated using wild turnip as the maternal plant, with some minor differences between wild turnip populations. The frequency of successful hybridisation between the two species was higher on the lower raceme. However, the upper raceme produced more dormant interspecific hybrid seed. Field trials, designed to imitate rare rape crop escapes into the ruderal environment, examined the ability of rare rape plants to pollinate wild turnip plants over four summers. At a ratio of 1 rape plant for every 400 wild turnip plants, the incidence of interspecific hybridisation was consistently low (<0.1 to 2.1 % of total seed on wild turnip plants). There was a significant year effect with the first season producing significantly more seed and a greater frequency of interspecific hybrid progeny than the other years. The frequency of interspecific hybrid progeny increases when the ratio of rape: wild turnip plant numbers increases. The relative importance of anemophily and entomophily in the production of interspecific hybrids was examined. Wild turnip plants produced twice as many seeds with bee pollination relative to wind pollination. However, the frequency of interspecific hybrids under wind pollination was nearly twice that for bee pollination. Light reflectance patterns under UV light revealed a marked difference between wild turnip and rape flowers compared to near identical appearance under visible light. The data indicates that bees are able to distinguish between rape and wild turnip flowers and exhibit floral constancy when foraging among populations with these two species. Hybrid survival in the seed bank, germination and seedling establishment in the field are important components of fitness. Seed banks established in the soil after the field trials described above germinated in subsequent spring seasons. The predominantly brassica weed populations were screened for herbicide resistance and the numbers of interspecific hybrids germinating compared to the original frequency in the field trial results. Frequency of interspecific hybrids was reduced in the populations compared to the original seed deposit. Seed with a known frequency of interspecific hybrid seed was sown in a separate trial, and the frequency of interspecific hybrids compared at 0, 4, 6, and 8 weeks after sowing. Poor germination resulted limited competition between seedlings, however the frequency of interspecific hybrids declined over time indicating low plant fitness. There were no significant population effects on any parameters tested. Interspecific hybrids grown in a glasshouse were backcrossed to the parental species and selfed within the plant and within populations. Pollen from the interspecific hybrids was found to have markedly reduced fertility. Interspecific hybrid plants had low female fertility, with the majority (88%) of the pollinated flowers aborting the siliques. Of the remaining siliques, most (98%) had only one to three seeds per silique. Inheritance of the herbicide resistance gene was regular in backcrosses but highly skewed following self pollination with an excess of herbicide-sensitive progeny. Production of a stochastic predictive model integrated the information acquired over the practical work phase of this thesis and utilised the capabilities of @risk, a new application of a risk analysis tool. The three outputs examined were the number of flowering plants resulting from backcrosses to rape and wild turnip and self pollination of the interspecific hybrid progeny. Five scenarios were modelled and all demonstrated the high likelihood of introgression failure in this system. In all scenarios, >75% of simulations resulted in no interspecific hybrid progeny surviving to flowering in the third generation. In all scenarios, and for all three outputs, the seed set on the interspecific hybrids of the second generation was the major factor that limited the number interspecific hybrid progeny surviving to flowering in the third generation.

Chionochloa, a genus of snow tussock grasses native to New Zealand, exhibits pronounced mast seeding. Chionochloa suffers very high levels of pre-dispersal flower and seed predation by three main insects: Eucalyptodiplosis chionochloae, a cecidomyiid midge, which is formally described here; Megacraspedus calamogonus, a gelechiid moth and Diplotoxa similis, a chloropid fly. Seven species of parasitoids that attack these seed predators were discovered. Four species parasitize M. calamogonus (one tachinid fly and three hymenopteran wasps), one parasitizes D. similis (Hymenoptera: Eulophidae) and two parasitize E. chionochloae, (a pteromalid wasp Gastrancistrus sp. and a platygastrid wasp Zelostemma chionochloae, which is given a formal description here). The abundance, predation levels by each of the insect species, and interactions between all the organisms in the community were studied across three elevations at Mount Hutt over three summer seasons. M. calamogonus was most abundant at 450 m altitude during all three seasons. D. similis was most common at 1070 m altitude, while its predation levels peaked in low flowering seasons and decreased in high seasons. E. chionochloae was abundant in all three altitudes and increased its predation levels with increasing flowering intensity. E. chionochloae was confirmed to use prolonged diapause of at least three years. Prolonged diapause was also confirmed in its two parasitoids. Chionochloa plants were manipulated with various treatments to test the effect on diapause in E. chionochloae and its two parasitoids. Treatments included plant warming, root pruning, gibberellic acid sprayed on the plants and combinations of these treatments. All three insects changed their emergence in response to some treatments and therefore it was suggested that combined with risk-spreading diapause, they may use some predicting to emerge from prolonged diapause. E. chionochloae control their diapause following some of the cues that Chionochloa use for flowering, while Z. chionochloae and Gastrancistrus in some cases follow their host’s cues and in others use similar cues as Chionochloa plants. Emergence or diapause predictions differed across elevations and plant species in all three insect seed/flower predators. E. chionochloae had female-biased sex ratios in different populations even after prolonged diapause. There was week evidence that both parasitoid species are female-biased in the first emergence year and male-biased after more than one year in diapause. Therefore it was suggested that diapause is not more costly for females of E. chionochloae and its parasitoid than for males. Females of all three species were not found to be better predictors (i.e, more likely to respond to treatments by not entering extended diapause) than males. The complex interactions of all the organisms in this web are thought to be sensitive to climate, and it was suggested that the global climate change may alter this sensitive system.

Mémoire numérisé par la Division de la gestion de documents et des archives de l'Université de Montréal.

Plant-soil feedback is an important mechanism in plant communities affecting their species composition. Understanding plant-soil feedback is crucial for describing the interactions between plant communities and their soil communities. The effects of plant-soil feedback can be positive, negative or neutral and because of these changes plants are either coexisting or competing. Plant-soil feedback is often studied within plant succession, plant invasion and plant dominance in a plant community. In these cases, the nature and strength of influence of each species is studied. Despite the large number of previous studies on plant-soil feedback, very little is known about the temporal and spatial changes of the intensity of plant-soil feedback and the intraspecific variability in plant-soil feedback. The aim of my work was to observe the temporal changes in the plant-soil feedback of a species growing in soil which was conditioned by the same or other plant species. Another goal was to explore spatial changes in plant-soil feedback. The last objective was to test differences in the intensity of plant-soil feedback among different genotypes of one species. The results of my work demonstrated that the intensity of intraspecific plant-soil feedback of Rorippa austriaca is negative and increases with...