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Analýzy velikosti genomu, ploidie a karyotypu u kmenů Monocercomonoides / Analyses of Monocercomonoides genome sizes, ploidies and karyotypesKornalíková, Martina January 2019 (has links)
Oxymonads are a group of flagellate protists living in low oxygen environments - mainly the guts of insects and vertebrates. In this study, we focus on the analysis of ploidy and karyotype of various species of oxymonads using Fluorescence In Situ Hybridization (FISH) with probes against single copy genes and telomeric repeats as well as estimating the DNA content in the nuclei of these oxymonads using flow cytometry. Using specific FISH probes against SufDSU gene, which is present in a single copy in the haploid genome, we showed that all studied strains are probably haploid. From the genome of Monocercomonoides exilis strain PA203 we know that oxymonads have the ancestral type of telomeric repeat (TTAGGG). Using a probe against these repeats we tried to label chromosome ends and estimate the number of chromosomes for seven strains (five species) of Monocercomonoides. With a single exception, the average number of signals per nucleus was below 20 indicating number of chromosomes below 10. In the strains of M. mercovicensis, we observed much higher number of signals suggesting that the cells have much higher number of chromosomes. Finally, we established the DNA content for several strains using flow cytometry. We used as a standard M. exilis strain PA203 knowing that the haploid genome size is...
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Karyotypová diferenciace štírů rodu Euscorpius (Scorpiones: Euscorpiidae) v Evropě / Karyotype differentiation of Euscorpius scorpions (Scorpiones: Euscorpiidae) in EuropeNovotný, Tomáš January 2012 (has links)
The aim of presented work is to provide characteristics of the karyotypes of scorpions of the genus Euscorpius. Genus Euscorpius is a typical representative of scorpions in Europe. Its occurrence is wide throughout Europe. Until now, 18 species of this genus have been described. In this work six species were karyologically analyzed and one species was shown to possess only basic diploid number of chromosomes: E. carpathicus - 2n=90, E. concinnus - 2n=88, E. hadzii - 2n=68, E. sicanus - 2n=66, E. tergestinus - 2n=60, E. naupliensis - 2n=60, E. italicus - 2n=36. Description of the karyotypes revealed that all species studied exhibit achiasmatic meiosis; no presence of sex chromosomes was detected. The basic hypothesis of phylogenetic relationships and karyotype evolution of the genus Euscorpius was outlined. High interspecies variability in chromosome total count was found and by analysis of the 16S rRNA gene the taxonomic status of the species was confirmed. Hence, it seems that cytogenetic methods can contribute to the understanding of species diversity and differentiation of possible cryptic species within the genus Euscorpius.
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Karyotypy Giardia intestinalis / Giardia intestinalis karyotypesHudosová, Lenka January 2012 (has links)
Giardia intestinalis is a parasitic protist that causes one of the most common diarrheal disease of parasite origin. The cell of Giardia contains two nuclei with unknown number of chromosomes until recently. Karyotype was determined five years ago using conventional cytogenetic method by Tůmová and collaborators. In my work, I assessed karyotype of four isolates, six lines and three clonal lines by the same method. It was confirmed, that two nuclei within one cell could differ in chromosome number, the differences found were 1, 2 or 6 chromosomes. Aneuploid number of chromosomes was found too. In case that both nuclei within single cell contained the same number of chromosomes, there were 10 chromosomes indentified in each nucleus. It was also revealed, that karyotype is not specific feature for different genetic groups (in this work assemblages A and E). Karyotype can be different even among lines and clonal populations derived from the same isolate. Changes in karyotype in the course of in vitro cultivation were detected within three populations. Results are discussed in relation to known facts.
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Karyotypová variabilita sekáčů čeledi Nemastomatidae (Arachnida: Opiliones) / Karyotype variability of harvestmen from Nemastomatidae family (Arachnida: Opiliones)Alaverdyan, Argam January 2018 (has links)
This master's thesis is focused on cytogenetic analysis and karyotype variability of the Nemastomatidae family. This family comprises morphologically uniform harvestmen of small sizes, with low mobility, and with center of distribution in Europe. Karyotype differences could play an important role for detection of cryptic diversity in this family. The karyotype analysis is focused mainly on Alpine and Pyrenean endemic species but also on other taxons located in Central Europe. The goal was not only to identify the differences which occur between the specific genera and species, but also eventually between populations. For detection of the specific chromosomal alterations in evolution of the karyotype in Nemastomatidae the fluorescent in situ hybridization (FISH) was used, localizing the positions and amounts of gene clusters for 18S rRNA. From the results we can assume that the number of chromosomes in the family Nemastomatidae can range between 2n = 12- 30. Further it was found out that in Nemastomatidae the biarmed chromosomes are more prevalent, and that the species which have lower amounts of chromosomes contain chromosomes that noticeably differ in size (probably because of chromosomal fusions). These results indicate that with some morphologically uniform species, the knowledge of specific...
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Cytogenetic and molecular characterization of the macro- and micro-inversions, which distinguish the human and the chimpanzee karyotypes - form speciation to polymorphismSzamalek, Justyna Monika, January 2006 (has links)
Ulm, Univ. Diss., 2006.
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Evoluce pohlavních chromozomů a karyotypů u leguánů (Squamata: Pleurodonta) / Evolution of sex chromosomes and karyotypes in iguanas (Squamata: Pleurodonta)Altmanová, Marie January 2017 (has links)
Evolution of sex chromosomes and karyotypes in iguanas (Squamata: Pleurodonta) PhD Thesis Marie Altmanová Abstract This PhD thesis is composed of five published articles and one manuscript, and is focused on the evolution of the sex chromosomes and karyotype of the iguanas (Pleurodonta). Based on our primary research of available data, only male heterogamety (XX/XY) with ancestral karyotype 2n = 36 chromosomes was recorded in iguanas. However, in many species sex chromosomes have not been uncovered by classical cytogenetics, probably due to their homomorphy. The partially-known X chromosome content of Anolis carolinensis allowed us to compare the relative gene doses of X-specific genes between male and female of representatives of all iguana families, and to reveal homologous and well-differentiated sex chromosomes across all iguanas, with the exception of basilisks. Thus, due to the comparable age with sex chromosomes of mammals and birds, the results put into question the importance of endothermy for the formation of stable sex chromosomes. The striking feature of the iguanas is the relatively frequent occurrence of multiple sex chromosomes in their karyotypes. Using the ancestral state analysis of the type of sex chromosomes, it has been found that these multiple sex chromosomes developed at least twelve...
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Srovnávací cytogenetika štěnice Cimex lectularius (Heteroptera: Cimicidae) / Comparative cytogenetics of bed bug Cimex lectularius (Heteroptera: Cimicidae)Sadílek, David January 2012 (has links)
Comparative cytogenetics of the bed bug Cimex lectularius (Heteroptera: Cimicidae) The human bed bug Cimex lectularius has started enormous spreading to all developed countries of temperate climate zone during the last ten years. Bed bug was almost eradicated by a mass use of DDT in these areas until the 70's in the 20th century. This temporal haematophagous ectoparasite occupies particularly human dwellings and bat roosts. Cimex lectularius shows unusual combination of cytogenetic characteristics, general for all Heteroptera, however, not usual for other organisms. The chromosomes are holokinetic, with completely achiasmatic meiosis and inverted meiosis of the sex chromosomes. Especialy remarkable feature is intraspecific variation of the number of the X chromosomes. The variable number of chromosomes of 43 populations of Cimex lectularius from the Czech Republic and 27 populations from other European countries was studied in the present study. The 10 variants of karyotype were found out by using the "hotplate spreading" method and the standard Giemsa staining. There were male karyotypes with 2n = 29, 30, 31, 32, 33, 34, 35, 37, 42 and 47 chromosomes and two females with peculiar odd number of sex chromosomes X, 2n = 33 and 43, not complementary with any male. A stable number of 2n = 26 autosomes...
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Evoluce pohlavních chromozomů a karyotypů hadů / Evolution of sex chromosomes and karyotypes in snakesAugstenová, Barbora January 2017 (has links)
Snakes (Serpentes) are a group of squamate reptiles (Squamata) including more than 3600 species. The vast majority of snakes are from the group Caenophidia, which includes approximately 90% of all extant snake species and represents the most studied lineage. Squamate reptiles are variable in sex determination and genome organisation, however, caenophidian snakes are quite stable in these respects. The typical - and probably ancestral - snake karyotype is composed of 36 chromosomes with 16 macro- and 20 microchromosomes. In all snake species, genotypic sex determination (GSD) is expected and it was assumed until recently that all snakes possessed ZZ/ZW sex chromosomes. The main reason for this is that most of the studied snakes were from the group Caenophidia and in the rest of the snake lineages it was believed that their sex chromosomes were homologous. In fact, the sex chromosomes of non-caenophidian snakes have not yet been identified - with the single exception of Acrantophis dumerili. Nevertheless, a recent study showed that there was an independent evolution of XX/XY sex chromosomes in pythons and boas. Sex chromosomes of these snakes are homomorphic and so far they have not been detected by classical cytogenetic methods. In this context, the aim of this study is to explore whether it is...
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Varianty chromozomu 9 u člověka - od normy k patologii Epidemiologie a význam v klinické genetické praxi. / Variants of human chromosome 9 - from norm to pathology Epidemiology and significance for medical genetics.Šípek, Antonín January 2019 (has links)
Heterochromatin variants of human chromosome 9 belong to the most common variabilities of human karyotype. The variability involves the large block of constitutive heterochromatin in the pericentric region of chromosome 9, which is composed of various types of repetitive DNA sequences. Those variants can be studied from population epidemiologic, molecular cytogenetic and clinical genetic point of view. We have performed a broad epidemiologic study of the incidence of pericentric inversion of chromosome 9 (inv(9)) and other variants of chromosome 9 in 6 different laboratory cohorts, which included the evaluation of more than 26.000 of cytogenetic reports, the study we published is currently the largest in the world. We expressed the overall incidence of inv(9) to be 1.6% and the total incidence of variants of chromosome 9 to be 3.3-3.9%. Inv(9) was more common in females, however the difference was not statistically significant. Molecular cytogenetic part of the project was based on our own diagnostic approach, which involved the combination of three different commercial FISH probes. Combination of those probes allowed us to differentiate particular subvariants of chromosome 9, which cannot be analyzed only by using G- or C-banding. Using our method, we tested 49 carriers of chromosome 9...
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Karyotypová evoluce pavouků čeledi Araneidae / Karyotype evolution of the family AraneidaePajpach, Filip January 2018 (has links)
Orb-weavers (Araneidae) are a diversified spider family comprising more than 3,100 species in more than 170 genera. Together with 13 other families, they con- stitute to superfamily Araneoidea. The presented thesis focuses on karyotype evo- lution of Araneidae, including its comparison with a related family Tetragnathidae. The results obtained from 19 araneid and four tetragnathid species confirm previ- ously postulated hypothesis that the ancestral karyotype of Araneoidea (including Araneidae) consists of 24 acrocentric chromosomes in males, including two acro- centric X chromosomes of system X1X20. However, there is a tendency of 2n decrease in some araneids due to centric fusions. In these cases, centric fusions affected most autosomes (and sometimes gonosomes as well); number of chromosome pairs de- creased from 11 to six. Three independent reduction events were detected in this thesis. Furthermore, pattern of nucleolar organizer regions (NORs) was studied in this thesis using fluorescent in situ hybridization, since data on evolution of this marker are scarce in spiders. Striking variability in NORs number was discovered, ranging from one to 13 loci. Remarkably, multiple centric fusions were always ac- companied by considerable increase of NORs number. In araneids and tetragnathids possessing...
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