Spelling suggestions: "subject:"gymnanthes -- genetics"" "subject:"achnanthes -- genetics""
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Genetics of low erucic acid and cytological analyses of wide hybrids in meadowfoamGandhi, Sonali Dilip 26 April 2002 (has links)
Cultivated meadowfoam (Limnanthes alba Benth.) is an annual oil seed crop
native to southern Oregon. California and British Columbia. The genus
Limnanthes is composed of nine species and divided into two sections, Inflexae and
Reflexae. The seed oil of meadowfoam is a rich source of erucic acid and several
novel very long-chain fatty acids (VLCs). The former has been linked to increased
risk of heart disease. The safe limit of erucic acid for human consumption is up to
5% of total fatty acids. Because the erucic acid concentrations of wildtype lines
typically range from 9 to 23% and low erucic acid variants have not been
discovered, chemical mutagenesis was used to develop a mutant line (LE76) with
greatly reduced erucic acid (3%). The phenotypic distributions of F��� progeny
from crosses between wildtype and mutant lines were continuous and differed
across genetic backgrounds. Quantitative trait loci (QTL) affecting erucic and
dienoic acid were mapped using F���:��� progeny from a cross between LE76 and
Wheeler (a wildtype line) and a simple sequence repeat (SSR) map spanning the
meadowfoam genome. The domestication of meadowfoam was based on L. alba,
belonging to section Inflexac. The secondary and tertiary gene pools have not been
important to the domestication process and have not supplied diversity for
meadowfoam breeding. With the objectives of introgressing genes from wild
relatives and also producing cytoplasmic male sterile lines by inserting the nuclear
genome of L. alba into wild cytoplasm, inter-sectional crosses involving L. alba
and three subspecies of L. douglasii and intra-sectional crosses involving L. alba
and two subspecies of L. floccosa were carried out. The isolation mechanisms
involved in keeping species apart from each other were found to be different within
and between sections. The study of partially fertile intra-sectional hybrids showed
that the reduced pollen viability (30-33%) was not due to structural differences
between the chromosomes of the two species, as normal meiotic behavior was
observed in PMCs. The inter-sectional crosses were found to be incompatible and
various abnormalities during pollen tube growth were observed. / Graduation date: 2002
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Mapping quantitative trait loci underlying genome-wide recombination rate and mating system differences in meadowfoamKishore, Venkata Krishna 21 March 2002 (has links)
Meadowfoam (Limnanthes alba Bentham; Order: Brassicales; Family:
Limnanthaceae) is a self-compatible, predominantly allogamous, insect pollinated
species. Meadowfoam oil is a source of novel unsaturated very-long-chain (VLC) seed
oils (C������ and C������) with low concentrations of saturated fatty acids (typically less than
2%) and outstanding oxidative stability. Here we report the development of 389 SSR
markers for meadowfoam. All the 389 SSRs were screened on 14 meadowfoam
germplasm accessions to assess their utility and efficiency. Ninety-six percent of the
SSR markers (373 out of 389) were polymorphic among the 14-germplasm accessions
(from nine taxa) with a mean heterozygosity of 0.63.
We also report that the physical size of the meadowfoam genome was
estimated to be 5.52 pg using flow cytometry; thus, the meadowfoam genome is ca. 16
times larger than the Arabidopsis genome. Karyotype analyses revealed that the
meadowfoam genome is made up of two metacentric and three submetacentric
chromosomes. Meadowfoam has two pairs of chromosomes with subterminal
nucleolar organizing regions (NOR's). A genetic map comprised of 84 SSR loci
dispersed among five linkage groups with 11 to 22 SSR loci per linkage (6 SSR loci
segregated independently) was constructed. The map was 988.7 cM long with a mean
density of 11.8 cM and minimal clustering of loci.
A total of 20 quantitative trait loci (QTL) were identified for five mating
system characters in meadowfoam, using the SSR linkage map of meadowfoam.
Individual QTL for mating system traits peta1 area (pa), seeds per plant (spp) and
seeds per flower (spf)I account for up to 20% of the backcross phenotypic variance,
with most traits showing QTL effects of 5-15%. The QTL for protandry and chiasma
frequency were adjacent to the QTL for spp and spf. This study has provided evidence
that the correlation between the chiasma frequency and the type of mating system is
not a direct developmental relationship between these factors, but is due to a selective
advantage of the combination of the characters found. The speculation that the genetic
factors underlying chiasma frequency and autonomous seed set have co-evolved
during evolution negates the self-fertilization as an "evolutionary dead end". / Graduation date: 2002
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DNA fingerprinting and genome mapping in meadowfoamKatengam, Sureeporn 22 October 1999 (has links)
Marker information in the new oilseed crop, meadowfoam, is limited. Molecular markers to facilitate meadowfoam breeding and cultivar improvement are not available. The knowledge of genetic relationships among recent germplasm is not known. The objectives of this study were (i) to gain an understanding of genetic diversity and relationship patterns among germplasm. (ii) to construct a genetic linkage map, and (iii) to map genes and QTLs (Quantitative Trait Loci) underlying erucic and dienoic acid concentrations in seed oils. We fingerprinted meadowfoam 41 accessions of section inflexae of family Limnanthaceae using 176 AFLP markers. Polymorphic information content (PIC) scores were high in 42.6% of the markers and ranged from 0.45 to 0.5. Genetic distance estimates ranged from
0.14 to 0.55 with an average of 0.44. The clustering phenogram showed concordance with taxonomic classification. The first three principal component analyses accounted for 37% of the total variation of genetic distance estimated. We concluded that the genetic diversity of elite and exotic germplasm in section Inflexae was high.
The AFLP genetic linkage map for meadowfoam was built using inter-subspecific backcross progeny between OMF40-11 (Limnanthes. alba spp. alba) and 0MF64 (L. alba spp. versicolor). The map was comprised of 104 loci in five linkage groups, with 14 to 28 loci per linkage group. The map
covered 698.3 cM with a mean density of 6.7 cM. The lengths of the linkage groups varied from 110.3 to 168.0 cM. AFLP loci were randomly distributed throughout the genome with no centromeric clustering. Genetic maps of meadowfoam can be rapidly Constructed using a small number of AFLP primer combinations.
We utilized the AFLP genetic linkage map to map genes and QTLs underlying erucic and dienoic acid concentrations in seed oils. The QTL analyses were performed using interval mapping. QTL affecting erucic and dienoic acids was mapped to linkage group four at the E locus, which controlled seed oil phenotypic differences between the two subspecies, alba and versicolor. The effect of E locus was pleiotropic. QTLs with significant effects on content of erucic and dienoic acid other than the effects of E locus were not found in this backcross population. / Graduation date: 2000
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