1061 |
Binding properties of adaptor proteins Tollip and Tom1Brannon, Mary Katherine 02 July 2015 (has links)
Adaptor proteins, like Tollip and Tom1, facilitate cellular cargo sorting through their ubiquitin-binding domains. Tollip and Tom1 bind to each other through their TBD and GAT domains, respectively, whereas Tollip interacts with phosphatidylinositol-3-phosphate (PtdIns(3)P)-containing endosomal membranes. Tom1 and Tollip interaction and association with endosomes is proposed to be involved in the lysosomal degradation of polyubiquitinated cargo. Through cellular, biochemical, and biophysical techniques, we have further characterized the association of Tom1 with Tollip. Mutations in the binding interface of the Tom1 GAT and Tollip TBD complex leads to a subcellular mis-localization of both proteins, indicating that Tom1 may serve to direct Tollip to specific cellular pathways. It was determined that Tom1 inhibits the binding of Tollip to PtdIns(3)P and inhibition was reversed when mutations in the binding interface of the Tom1 GAT and Tollip TBD were present. Furthermore, it was established that, upon the binding of Tollip TBD to Tom1 GAT, ubiquitin is inhibited from binding to Tom1 GAT. It was also demonstrated that Tom1 GAT, but not Tollip TBD, can weakly bind to PtdIns(3)P. Consequently, we propose that association of Tom1 may serve to direct Tollip for involvement in specific cell signaling pathways. Gaining insight into the function of Tom1 and Tollip may lead to their use as therapeutic targets for increasing the efficiency of cargo trafficking and also for patients recovering from various cardiac injuries. / Master of Science
|
1062 |
Synthesis of achiral and chiral CCC-NHC ligands and metal complexes for their catalytic applications in C-H functionalization of indoles with diazoacetates and benzoin condensationRawat, Maitreyee 10 May 2024 (has links) (PDF)
The N-heterocyclic carbene (NHCs) based pincer ligands field is still in its infancy after decades. They are known for their applications in organocatalysis, coordinating with transition metals and p-block elements, catalysis, and material chemistry. Among all NHCs, CCC-NHC-based on late-transition metal complexes were first developed by our group in 2005 with a unique metalation/transmetalation strategy. Our group also designed the chiral version of these CCC-NHC ligands to synthesize its metal complexes. However, their asymmetric catalytic applications were unknown. Wanting to expand on this work, we first successfully synthesized achiral CCC-NHC pincer complexes and their new catalytic application, as it is economically cheaper than directly working on developing a chiral version for catalysis. Then, different chiral CCC-NHC salts were synthesized based on different chiral arms and N-substituents on NHCs to modify their steric hindrance and electronic structure properties. These precursors were used for their enantioselective application in nucleophilic catalysis. In Chapter II, we will discuss the synthesis of the CCC-NHC pincer Ir (III) dimer complex and its first catalytic application in C−H functionalization of N-methylindoles with alpha-aryl-alpha-diazoacetates at the C-3. The best reaction conditions involve a combination of catalysts and substrates in a specific order. It resulted in the activation of the C-H bond with the formation of a new C-C bond to generate alpha-aryl-alpha-indolyl acetates with more than 99% conversion at room temperature without requiring any additives. The substrate scope and limitations of N-methyl indoles and diazoacetates were also explored. Chapter III will focus on a new modified synthetic route to synthesize and characterize chiral CCC-NHC chloride salts in a shorter synthetic route than the known one. The metalation/transmetalation of chiral CCC-NHC ligands with late transition metals and the initial attempt in asymmetric catalysis will be discussed in Chapter IV. Chapter, V, demonstrated nucleophilic catalysis of CCC-NHC precursors in benzoin condensation of aldehyde. The study started with the evaluation of fifteen different achiral bis-CCC-NHC salts based on triazole, imidazole, and benzimidazole. Further studies with chiral CCC-NHC salts also resulted in more than 99% conversion and 99% ee in benzoin products. The substrate scope of benzaldehyde with different substituents was also explored
|
1063 |
Magnetic Resonance Imaging of the Flow of Granular SuspensionsBordbar, Alireza January 2025 (has links)
Assemblies of granular particles suspended in a fluid-like state by interstitial liquid or upward gas flow, here referred to as granular suspensions, are critical to numerous industrial applications and natural processes. However, their inherent complexity and opacity pose significant challenges for direct measurement and analysis. Traditional invasive techniques often disrupt the flow dynamics, while optical methods are limited to transparent systems. To overcome these limitations, this study leverages advanced magnetic resonance imaging (MRI) techniques and computational models to analyze multiphase flow dynamics in opaque systems with high spatial and temporal resolution.This work is divided into three primary investigations.
First, MRI simulations are developed as a tool for comparison with experimental MRI measurements. These simulations replicate the physical principles of MRI and allow for the evaluation of imaging artifacts, measurement accuracy, and data interpretation in multiphase flow scenarios. By establishing a robust simulation framework, this work bridges the gap between theoretical and experimental studies, providing a basis for refining MRI measurements and improving comparison between simulations and measurements in complex flow systems.
Next, we employ MRI to investigate the dynamics of bubble rise in dense (liquid-solid) suspensions. High-resolution two-dimensional and three-dimensional imaging allows for detailed observation of bubble rise, coalescence, and deformation, as well as rise velocities under varying particle volume fractions. This study provides valuable insights into the interplay between bubble behavior and suspension properties, with implications for optimizing processes in chemical reactors, wastewater treatment, and other industries where bubble dynamics are crucial.
The final investigation focuses on particle velocity distributions in granular flows within two distinct fluidized bed systems: a gas-solid bed and a liquid-solid bed, both designed for compatibility with a vertical nuclear magnetic resonance (NMR) spectrometer. The overarching goal is to analyze how velocity distributions in granular gases deviate from the Gaussian patterns observed in molecular systems, examining the effects of inter-particle collisions, drag forces, and energy dissipation. Using computational fluid dynamics – discrete element method (CFD-DEM) simulations alongside MRI measurements, this study bridges molecular theory with granular flow behavior, providing critical insights into the physics of confined granular systems fluidized by upward fluid flow.
The concluding chapter summarizes the highlights of this study, explores potential future directions, and discusses the broader applicability of these findings. The insights gained here are relevant to a wide range of industrial systems, including fluidized bed reactors and sediment transport, as well as natural processes such as granular avalanches and particulate mixing. By combining the non-invasive imaging capabilities of MRI with advanced computational modeling, this work offers a powerful framework for understanding and optimizing multiphase flow systems across diverse contexts.
|
1064 |
Oxidation of Tetrahydropyridines by MAO B Biomimetics: Mechanistic StudiesPrice, Nathan James 23 January 2025 (has links)
The Parkinsonian Syndrome-inducing effects of 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) on the body have been well-documented since its discovery. However, its mechanism of oxidation by monoamine oxidase B (MAO B) has been debated for just as long. Proponents of the single electron transfer (SET) pathway of oxidation faced severe critiques in that the hypothesized radical intermediates arising from the SET pathway were never directly observed. Work performed herein provides that exact evidence using biomimetics of MAO B.
The first section of the dissertation will highlight the ability of one such biomimetic, 3-methyllumiflavin (3MLF), to provide a chemical model for the oxidation of -unsaturated tetrahydropyridines. Using a nontoxic analog of MPTP, 1-methyl-4-(1-methyl-1-H-pyrrol-2-yl)-1,2,3,6-tetra-hydropyridine (MMTP), reactions with 3MLF were performed under both aerobic and anaerobic conditions. The anaerobic studies of these reactions proved to be the key to the direct observations (by 1H NMR and EPR) of flavin-derived radical behavior.
Armed with the knowledge of how to prepare reactions for the direct observation of flavin radical intermediates, studies of N-cyclopropyl substrate derivatives were subsequently conducted to gather evidence for the formation of radical substrate intermediates. If the hypothesized SET is the first step of the reaction mechanism, then the resulting aminyl radical cation could undergo a cyclopropyl ring opening. Several products derived from the substrate were observed; among them were ring-opened variations suggesting that the reaction does begin with a SET. Thermodynamically, this process is unfavorable, leading to the hypothesis that this reaction step may be better described as a proton-coupled electron transfer (PCET). The kinetics of this process were studied at length.
Finally, to provide a more compelling argument for the fundamental reactivities, two other flavin biomimetics are investigated. Their reactions with tetrahydropyridines were put under the same scrutiny as 3MLF, leading to the conclusion that the chemistry discussed herein is not unique to 3MLF, but is much more broadly applicable to other flavin biomimetics and MAO B. / Doctor of Philosophy / First reported in 1982, Parkinsonian Syndrome related to the injection of the designer drug meperidine was linked to an impurity in the drug, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine, MPTP. That compound was able to be oxidized in the brain by the enzyme monoamine oxidase B (MAO B) to form the neurotoxin 1-methyl-4-phenylpyridinium (MPP+). For many years, the way that oxidation occurred remained a mystery as MPTP is chemically very different than typical substrates of MAO B. One type of reaction, single electron transfer (SET), which involves the production of high-energy intermediates called radicals, was largely overlooked as it seemed chemically implausible, especially in a biological system.
This dissertation will focus on providing evidence for the SET oxidation of MPTP-like molecules using a class of compounds called flavins. Flavins are biomimetics of MAO B, meaning they behave in reaction vessels the same way that MAO B behaves biologically. Evidence for the SET pathway comes primarily in two forms: nuclear magnetic resonance (1H NMR) and electron paramagnetic resonance (EPR). Each of these techniques allow us to "see" exactly what species are present in solution. In the case of 1H NMR, we will be able to see the "normal" molecules, while EPR allows us to see the high energy radical species in solution. Using these techniques, several substrate and flavin analogs were investigated to uncover a universal reaction mechanism by which MPTP and related compounds are oxidized by MAO B.
|
1065 |
Spectral Simplification In Scalar And Dipolar Coupled Spins Using Multiple Quantum NMR : Developments Of Novel MethodologiesBaishya, Bikash 05 1900 (has links)
Spin selective MQ-SQ correlation has been demonstrated by either selective pulses in homo-nuclear spin systems in isotropic and weakly orienting chiral media or by nonselective pulses in hetero-nuclear spin systems in strongly aligned media. As a consequence of the spin selective correlation, the coherence transfer pathway from MQ to SQ is spin state selective. This two dimensional approach enables the utilization of the passive couplings (remote couplings) to break a complex one dimensional spectrum into many sub spectra. Each sub spectrum contains fewer transitions and hence fewer couplings (active couplings). The role of the passive couplings is to displace the sub spectra and measurement of the displacements taking into account their relative tilt provides the magnitude of the passive couplings along with relative signs. Further possibility of a spin state selective MQ-SQ resolved experiment to determine very small remote couplings otherwise buried within linewidth in one dimensional spectrum has been demonstrated. The resolution of the multiple quantum spectrum in indirect dimension has also been exploited to separate the sub spectra. The technique renders the analysis of complex spectrum in isotropic system much simpler. The potentialities of the technique have also been demonstrated for discrimination of optical enantiomers and derivation of the residual dipolar couplings from very complicated spectrum. The second order spectrum in strongly aligned media restrict selective excitation, however in hetero-nuclear spin system the nonselective pulses on protons do not interact with the hetero-nuclear spins. Thus the weakly coupled part of a strongly coupled spectrum has been exploited for simplifying the second order spectrum and thereby its analysis. Thus several methodologies derived from spin selective correlation has been demonstrated.
Enantiopure spectrum has been recorded from a mixture of R and S enantiomers by a novel pulse scheme called Double Quantum Selective Refocusing Experiment. The dipolar coupled methyl protons in weakly orienting media are utilized. The selective excitation of double quantum coherence reduces the three spin system into a two spin system and remote couplings are refocused which otherwise leads to broadening. The sum of passive couplings being different for the enantiomers resolution in the DQ dimension is enhanced and thereby their discrimination.
Finally several decoupling schemes has been compared in the indirect dimension of HSQC experiment to resolve 13C satellite spectra otherwise buried within line width for increased confidence in determining hetero-nuclear framework information.
|
1066 |
Nuclear magnetic resonance and specific heat studies of half-metallic ferromagnetic Heusler compoundsRodan, Steven 01 March 2016 (has links) (PDF)
Half-metallic ferromagnets (HMFs), with fully spin-polarized conduction electrons, are prime candidates for optimizing spintronic devices. Many Heusler compounds (a class of ternary and quaternary intermetallics) are predicted to be HMFs, in particular Co$_{2}YZ$ (where $Y$ is usually another transition metal, and $Z$ is an s-p element). Crystal structure is controlled by thermodynamics to a large extent. Ideally, one should be able to control and optimize properties which are of interest by appropriately "tuning" the structure (e.g. annealing), but first one must understand the structure and its relation to observed physical properties. A local structural probe technique such as nuclear magnetic resonance (NMR) is an essential tool for identifying and quantifying the various atomic-scale orderings. Different Heusler structure types and antisite disorders affect the material's physical properties.
In this thesis, order-disorder phenomena in both bulk and thin film samples of Co$_2$Mn$_{1-x}$Si$_x$ and Co$_2$Mn$_{1-x}$Fe$_x$Si have been systematically studied using NMR. Though it is the films which are directly implemented in actual devices, studying bulk samples as model systems provides invaluable information regarding the material properties.
The evolution of local atomic structure in numerous thin films has been shown to depend greatly on preparation parameters, including post-deposition annealing temperature, and specific stoichiometry. For Co$_2$MnSi films, the ideal post-annealing temperature for promoting the $L2_1$ atomic structure was found; the threshold temperature above which structure continues to become higher-ordered in the bulk, but where too much interdiffusion at the buffer interface occurs, degrading the smooth interfaces necessary for high magnetoresistance ratios. NMR also adds evidence that Co$_2$Mn$_x$Si$_{0.88}$ ($x>$1) electrodes in magnetic tunnel junctions have highest tunneling magneto-resistance because the excess Mn suppresses the formation of detrimental Co$_{Mn}$ antisites.
A systematic investigation of several thermal and magnetic properties, including Sommerfeld coefficients, Debye temperatures, saturation magnetic moments, spin-wave stiffness, and magnon specific heat coefficient, were measured for selected Co$_2$-based ternary and quaternary Heusler compounds. Obtained values were compared with theoretical ones calculated using electronic band structure methods. It has been systematically shown that adding a magnon term to the specific heat has a negligible effect on the electronic contribution in all cases.
|
1067 |
Highly efficient quantum spin dynamics simulation algorithmsEdwards, Luke J. January 2014 (has links)
Spin dynamics simulations are used to gain insight into important magnetic resonance experiments in the fields of chemistry, biochemistry, and physics. Presented in this thesis are investigations into how to accelerate these simulations by making them more efficient. Chapter 1 gives a brief introduction to the methods of spin dynamics simulation used in the rest of the thesis. The `exponential scaling problem' that formally limits the size of spin system that can be simulated is described. Chapter 2 provides a summary of methods that have been developed to overcome the exponential scaling problem in liquid state magnetic resonance. The possibility of utilizing the multiple processors prevalent in modern computers to accelerate spin dynamics simulations provides the impetus for the investigation found in Chapter 3. A number of different methods of parallelization leading to acceleration of spin dynamics simulations are derived and discussed. It is often the case that the parameters defining a spin system are time-dependent. This complicates the simulation of the spin dynamics of the system. Chapter 4 presents a method of simplifying such simulations by mapping the spin dynamics into a larger state space. This method is applied to simulations incorporating mechanical spinning of the sample with powder averaging. In Chapter 5, implementations of several magnetic resonance experiments are detailed. In so doing, use of techniques developed in Chapters 2 and 3 are exemplified. Further, specific details of these experiments are utilized to increase the efficiency of their simulation.
|
1068 |
NMR studies of radical polymerization processesKlumperman, Bert 12 1900 (has links)
Thesis (DSc)--Stellenbosch University, 2012. / ENGLISH ABSTRACT: Examples
of
the
use
of
NMR
spectroscopy
in
the
study
of
radical
polymerization
processes
have
been
described.
The
studies
presented
have
made
a
significant
contribution
to
the
understanding
of
the
fundamental
mechanistic
processes
in
these
polymerization
systems.
It
is
pointed
out
that
NMR
in
conventional
radical
polymerization
is
of
limited
use
due
to
the
concurrent
occurrence
of
all
elementary
reactions
(initiation,
propagation
and
termination).
Conversely,
for
living
radical
polymerization,
NMR
has
great
value.
In
that
case,
the
elementary
reactions
are
somewhat
more
restricted
to
specific
times
of
the
polymerization
process.
This
allows
for
example
the
detailed
study
of
the
early
stages
of
chain
growth
in
Reversible
Addition-‐Fragmentation
Chain
Transfer
(RAFT)
mediated
polymerization.
Two
different
studies
are
described.
The
first
is
related
to
the
early
stages
of
RAFT-‐mediated
polymerization.
A
process
for
which
we
coined
the
name
initialization
was
studied
via
in
situ
1H
NMR
spectroscopy.
It
is
shown
that
in
many
cases,
there
is
a
selective
reaction
that
converts
the
original
RAFT
agent
into
its
single
monomer
adduct.
A
few
different
examples
and
their
mechanistic
interpretation
are
discussed.
It
is
also
shown
that
NMR
spectroscopy
can
be
a
valuable
tool
for
the
assessment
of
a
RAFT
agent
in
conjunction
with
a
specific
monomer
and
polymerization
conditions.
In
the
second
study,
15N
NMR,
31P
NMR
and
1H
NMR
are
used
for
two
different
types
of
experiments.
The
first
is
a
conventional
radical
copolymerization
in
which
the
growing
chains
are
trapped
by
a
15N
labeled
nitroxide
to
yield
a
stable
product.
In
the
second
experiment,
a
similar
copolymerization
is
conducted
under
nitroxide-‐mediated
conditions.
The
nitroxide
of
choice
contains
phosphorous,
which
enables
the
quantification
of
the
terminal
monomer
in
the
dormant
chains.
Each
of
the
experiments
individually
provides
interesting
information
on
conventional
radical
copolymerization
and
nitroxide-‐mediated
copolymerization,
respectively.
Combination
of
the
experimental
data
reveals
an
interesting
discrepancy
in
the
ratio
of
terminal
monomer
units
in
active
chains
and
dormant
chains.
Although
not
unexpected,
this
result
is
interesting
and
useful
from
a
mechanistic
as
well
as
a
synthetic
point
of
view.
In
terms
of
future
perspectives,
it
is
expected
that
the
advanced
analytical
techniques
as
described
here
will
remain
crucial
in
polymer
science.
Present
developments
in
radical
polymerization,
such
as
investigations
into
monomer
sequence
control,
rely
on
accurate
knowledge
of
kinetic
and
mechanistic
details
of
elementary
reactions.
It
is
expected
that
such
detailed
studies
will
be
a
main
challenge
for
the
next
decade
of
polymer
research. / AFRIKAANSE OPSOMMING: Voorbeelde
van
die
gebruik
van
KMR-‐spektroskopie
in
die
studie
van
radikaalpolimerisasies
word
beskryf.
Hierdie
studies
het
ʼn
beduidende
bydrae
gelewer
tot
die
verstaan
van
die
fundamentele
meganistiese
prosesse
in
hierdie
polimerisasiesisteme.
Dit
het
daarop
gewys
dat
KMR
beperkte
gebruike
het
in
konvensionele
radikaalpolimerisasies
as
gevolg
van
die
gelyktydige
voorkoms
van
alle
basiese
reaksies
(afsetting,
voortsetting
en
beëindiging).
Aan
die
anderkant
het
KMR
groot
waarde
vir
lewende
radikaalpolimerisasie.
In
hierdie
geval
is
die
elementêre
reaksies
ietwat
meer
beperk
tot
spesifieke
tye
van
die
polimerisasieproses.
Gedetailleerde
studies
kan
byvoorbeeld
van
die
vroeë
stadiums
van
die
kettinggroei
in
Omkeerbare
Addisie-‐Fragmentasie-‐
KettingOordrag
(OAFO)-‐bemiddelde
polimerisasie
gedoen
word.
Twee
verskillende
studies
is
beskryf.
Die
eerste
het
betrekking
op
die
vroeë
stadiums
van
die
OAFO-‐bemiddelde
polimerisasie.
'n
Proses
wat
“inisialisering”
genoem
is,
is
bestudeer
deur
middel
van
in
situ
1H
KMR-‐spektroskopie.
Dit
is
bewys
dat
daar
in
baie
gevalle
'n
selektiewe
reaksie
is
wat
die
oorspronklike
OAFO-‐agent
in
sy
enkelmonomeeradduk
verander
voor
polimerisasie.
'n
Paar
ander
voorbeelde
en
hul
meganistiese
interpretasie
is
bespreek.
Dit
is
ook
bewys
dat
KMR-‐spektroskopie
'n
waardevolle
hulpmiddel
kan
wees
vir
die
assessering
van
'n
OAFO-‐agent
in
samewerking
met
'n
spesifieke
monomeer
en
polimerisasie
toestande.
In
die
tweede
studie
is
15N
KMR,
31P
KMR
en
1H
KMR
gebruik
vir
twee
verskillende
tipes
van
die
eksperiment.
Die
eerste
is
'n
konvensionele
radikaalkopolimerisasie
waarin
die
groeiende
kettings
vasgevang
word
deur
'n
15N-‐gemerkte
nitroksied
om
'n
stabiele
produk
te
lewer.
In
die
tweede
eksperiment
is
'n
soortgelyke
kopolimerisasie
gedoen
onder
nitroksied-‐
bemiddelde
toestande.
Die
gekose
nitroksied
bevat
fosfor
wat
die
kwantifisering
van
die
terminale
monomeer
in
die
dormante
kettings
moontlik
maak.
Elkeen
van
die
individuele
eksperimente
lewer
interessante
inligting
oor
konvensionele
radikale
kopolimerisasie
en
nitroksied-‐bemiddelde
kopolimerisasie,
onderskeidelik.
ʼn
Kombinasie
van
die
eksperimentele
data
toon
'n
interessante
verskil
aan
in
die
verhouding
van
die
terminale
monomeereenhede
in
die
aktiewe
en
sluimerende
kettings.
Alhoewel
dit
nie
onverwags
is
nie,
is
die
resultate
interessant
en
van
waarde
vanuit
'n
meganistiese-‐
sowel
as
'n
sintetiese
oogpunt.
In
terme
van
toekomstige
perspektiewe
word
daar
verwag
dat
gevorderde
analitiese
tegnieke
soos
hier
beskryf,
belangrik
sal
bly
in
polimeerwetenskap.
Huidige
ontwikkelinge
in
radikaalpolimerisasie,
soos
ondersoeke
na
die
beheer
van
monomeervolgorde,
maak
staat
op
akkurate
kennis
van
kinetiese
en
meganistiese
besonderhede
van
die
basiese
reaksies.
Daar
word
verwag
dat
sulke
gedetailleerde
studies
ʼn
uitdaging
sal
bied
vir
die
volgende
dekade
van
polimeernavorsing.
|
1069 |
Novel methods of chemical speciation of Pt(IV/II) complexes in acid halide-rich solutions by ion-pair RP-HPLC coupled to ICP-OES/MS in conjunction with 195Pt NMRVan Wyk, Pieter-Hugo 03 1900 (has links)
Thesis (PhD)--Stellenbosch University, 2013. / ENGLISH ABSTRACT: In this work a robust reversed phase ion-pairing high performance liquid chromatographic
(RP-HPLC) method has been developed for the separation, characterization and quantification of
all possible [PtCl6-nBrn]2- (n = 0 – 6) and [PtCl4-nBrn]2- (n = 0 – 4) complex anions using UV-Vis
detection. High resolution 195Pt NMR of more concentrated PtII/IV solutions served to validate the
relevant species assignments, particularly those of the stereoisomer species, cis- and trans-
[PtCl4Br2]2-, [PtCl2Br4]2- and mer- and fac-[PtCl3Br3]2-. Quantification of the PtII/IV species was
achieved by means of IP-RP-HPLC coupled to either ICP-MS or ICP-OES, and together with the
UV-Vis absorption spectra obtained by photodiode array (PDA) recording of all eluted species,
allowed for the determination of the photometric characteristics (λmax and ε) of all the PtII/IV
species. This data enables practical speciation studies of such PtII/IV complex anions using
standard analytical equipment.
The hyphenation of ion-pairing RP-HPLC to ICP-OES allows for the successful determination
of the Pt to halide mole ratios of individually separated species in order to characterize these
species in a novel manner. The Pt to chloride and/or Pt to bromide mole ratio of the [PtCl4]2- and
the series of [PtCl6-nBrn]2- (n = 0 – 6) complexes were determined using HPLC-ICP-OES based
on the 177.708 nm Pt, 134.724 nm Cl and 148.845 nm Br emission lines and served as a
technique for the unambiguous chemical speciation of such complexes.
An increase in sensitivity of the developed method was achieved by the use of an ion-pairing
reversed phase ultra high performance liquid chromatography electrospray ionization quadrupole
time-of-flight mass spectrometry (UHPLC-ESI-Q-TOF-MS) method. This method proved
capable of separating and characterizing the homoleptic and heteroleptic [PtIVCl6-nBrn]2-
(n = 0 – 6) and mono-aquated [PtIVCl5-nBrn(H2O)]- (n = 0 – 5) complex anions in well defined
acidic aqueous solutions. Ion-pairing ultra high performance liquid chromatography separation based on the volatile ion-pairing reagent, tributylamine, provided adequate chromatographic
resolution as well as sufficiently low background noise for high resolution ESI-Q-TOF-MS
detection. The wealth of structural information contained in the mass spectra obtained for each
PtIV species simplified the identification of individual species. Moreover, the general
fragmentation trends encompassing a constant incremental change of 44 Da (79/81Br - 35/37Cl)
resulting from the successive substitution of Cl- by Br-, in combination with the observed elution
order, facilitated the relevant species assignments. The developed method enabled the relative
rapid (<13 min) characterization of all 22 [PtCl6-nBrn]2- (n = 0 – 6) and mono-aquated
[PtCl5-nBrn(H2O)]- (n = 0 – 5) species.
Quantification of each individual [PtCl6-nBrn]2- (n = 0 – 6) species by means of ion-paring
HPLC-UV-Vis allowed for the determination of all 17 stability constants for the PtIV chloridobromido
halide exchange reaction network. Determination of the associated Gibbs free energies
for each ligand exchange reaction step, o
rxnK ΔG
n
(n = 1 - 17), together with energy conservation
relationships, served to validate the accuracy of the experimentally calculated stability constants.
The experimentally determined overall formation constant, or ΔGo
rxn, and those calculated using
the standard reaction half cell reduction potentials of [PtCl6]2- and [PtBr6]2- were in good
agreement, further confirming the experimentally obtained thermodynamic parameters. The
thermodynamic driving force for the PtIV chloride-bromido exchange reactions is attributed to
the hydration of the halide ligands, which drives the reaction towards the bromido PtIV species in
aqueous solutions, even though the chlorido PtIV complexes are energetically favoured in this
reaction network. Evaluation of other metal cation halido exchange reactions shows that all metal
halido complexes exhibit the F- >> Cl- > Br- > I- order of thermodynamic stability and is only
inverted due to the solvation of the relevant halide ligands. Furthermore, density functional
theory (DFT) was used to predict the thermodynamic stabilities with respect to the isodesmic
reactions involving chlorido-bromido PtIV stereoisomer pairs and chlorido-bromido PtIV ligand
exchange reactions of the [PtCl6-nBrn]2- (n = 0 – 6) species and confirm the F- >> Cl- > Br- > I-
order of thermodynamic stability as well as determining the ΔΔGo
rxn within the range of 8 - 20
kJ.mol-1 to the experimentally determined ΔΔGo
rxn. / AFRIKAANSE OPSOMMING: Tydens hierdie studie is „n robuuste “reverse-phase” ioonparing hoë-verrigting vloeistof
chromatografie, RP-IP-HPLC, metode ontwikkel vir die skeiding, karakterisering en
kwantifisering van alle moontlike [PtCl6-nBrn]2- (n = 0 – 6) en [PtCl4-nBrn]2- (n = 0 – 4) kompleks
anione waar UV-Vis as detektor gebruik word. Die relavante spesies toedelings wat gemaak is,
veral ten opsigte van die cis- en trans-[PtCl4Br2]2-, [PtCl2Br4]2- en mer- en fac-[PtCl3Br3]2-
stereo-isomeerpare, is deur middel van hoë-resolusie 195Pt KMR van meer gekonsentreerde PtII/IV
oplossings bevestig. Die PtII/IV spesies was gekwantifiseer deur die IP-RP-HPLC aan of „n ICPMS
of „n ICP-OES te koppel. Daarenbowe was dit moontlik om die fotometriese eienskappe
(λmax en ε) van elke individuele PtII/IV komplex anion te bepaal deur die UV-Vis absorpsie
spektrum van elke elueerende spesies met PDA op te neem. Die nuwe metode wat tydens hierdie
studie ontwikkel is het dit dus moontlik gemaak om sulke PtII/IV komplek sanione met standaard
analitiese toerusting prakties te skei.
Verder is gevind dat deur IP-RP-HPLC aan ICP-OES te koppel dit moontlik is om die Pt tot
halied mol verhoudings van elke individueel geskeide spesies te bepaal en dus hierdie spesies op
„n oorspronklike, nuwe manier te karakteriseer. Die Pt tot chloried en/of Pt tot bromied mol
verhoudings van die [PtCl4]2- en die reeks van [PtCl6-nBrn]2- (n = 0 – 6) kompleks anione, soos
bepaal deur gebruik te maak van HPLC-ICP-OES, is gebasseer op die 177.708 nm Pt, 134.724
nm Cl en 148.845 nm Br emissie lyne. Hierdie metode kan gebruik word vir die eenduidige
chemiese skeiding van hierdie komplekse.
Die sensitiwiteit van hierdie metode was egter verder verbeter deur gebruik te maak van
ioonparing “reverse-phase” ultra hoë-verrigting vloeistof chromatografie gekoppel met
elektrosprei ionisasie quadropool “time-of-flight” massa spektrometrie (UHPLC-ESI-Q-TOFMS).
Deur dit te doen is dit nou selfs moontlik om die homoleptiese en heteroleptiese [PtIVCl6-nBrn]2- (n = 0 – 6) spesies, asook die “mono-aqauted” [PtIVCl5-nBrnH2O]- (n = 0 – 5)
spesies in „n goed gedefinieërde aangesuurde waterige oplossings te skei en te karakteriseer. Die
vlugtige ioon-paringsreagent, tributielamien, is vir die skeidingsproses op die IP-UHPLC gebruik
om te verseker dat voldoende chromatografiese resolusie, so wel as lae genoeg agtergrondgeraas,
verkry word vir hoë-resolusie ESI-Q-TOF-MS deteksie. Die rykdom informasie vervat in die
massaspektrum van elke PtIV spesies het die indentifikasie van elke spesies vergemaklik.
Daarenbowe het die fragmentasie tendens, aanduidend van „n konstante inkrementele
verandering van 44 amu (71/81Br – 35/37Cl) weens die opeenvolgende substitusie van Cl- met
Br-, tesame met die elusie volgorde, die spesies-toedelings gefasiliteer. Met hierdie nuut
ontwikkelde metode is dit nou moontlik om al 22 [PtCl6-nBrn]2- (n = 0 – 6) en “mono-aquated”
[PtCl5-nBrnH2O]- (n = 0 – 5) spesies in „n relatiewe kort tydperk (< 13 min) te karakteriseer.
Deurdat elke [PtCl6-nBrn]2- (n = 0 – 6) spesies nou individueel met IP-HPLC-UV-Vis
gekwantifiseer kan word, is dit moontlik om al 17 stabiliteitskonstantes vir die PtIV chloridobromido
halied uitruilingsreaksienetwerk te bepaal. Die geassosieerde Gibbs vrye energie,
ΔG°rxnKn (n = 0 – 17), wat vir elke stap in die uitruilingsreaksienetwerk bepaal is, tesame met die
energiebewaring verhoudings, was gebruik om die akkuraatheid van die eksperimenteel bepaalde
stabiliteitskonstantes te bekragtig. Verdermeer was die waarde van die algehele formasie
konstante wat eksperimenteel bepaal is, ΔG°rxn, in goeie ooreenstemming met dit wat bereken is
deur die standaard reaksie halfsel reduksie potensiale van [PtCl6]2- en [PtBr6]2-. Dus is die
eksperimenteel verkrygde termodinamiese parameters bevestig. Die termodinamiese dryfkrag vir
die PtIV chloried-bromied uitruilingsreaksies is toegereken aan die hidrasie van die halied
ligande, wat in waterige oplossings die reaksie na die bromied PtIV spesies dryf, al is die chloried
PtIV spesies energeties bevoordeel in hierdie reaksienetwerk. Evaluering van ander metaalkatioon-
halied-uitruilreaksies wys dat alle metaal-halied komplekse die F- >> Cl- > Br- > I- orde
van termodinamiese stabiliteit volg en dat hierdie volgorde slegs omgekeer sal word weens
solvasie van hierdie halied ligande. Darenbowe digtheids funksionele teorie (DFT) gebruik om
die termodinamiese stabiliteit met betrekking tot isodesmiese reaksies wat chloried-bromied PtIV
stereoisomeer pare behels te voorspel, sowel as van chloried-bromied PtIV
liganduitruilingsreaksies van die [PtCl6-nBrn]2- (n = 0 – 6) spesies, en bevestig die F- >> Cl- > Br-
> I- volgorde van termodinamiese stabiliteit. Verder was dit ook moontlik om met DFT die
ΔΔG°rxn tot so naby as 8 – 20 kJ.mol-1 te bereken.
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1070 |
SQUID detected low-field NMR for the evaluation of internal fruit qualityVan Zyl, Derrick Steven 12 1900 (has links)
Thesis (MScEng (Electrical and Electronic Engineering))--University of Stellenbosch, 2010. / ENGLISH ABSTRACT: Assessing the quality of fruit has become vitally important for farmers and
growers. With retailers placing ever stricter requirements on fresh produce,
growers have to spend a greater amount of time and effort sorting and grading
their harvest. Increasingly, vendors are placing requirements not only on
external factors like colour, and firmness, but on internal quality factors such
as sugar content and acidity, because, although consumers buy fruit based on
their external appearances, the taste of the fruit is what determines whether
the consumer will buy again. Different techniques exist that probe the internal
quality of fruit non-destructively. The technique most widely used today
is Near Infrared Spectroscopy. This technique is powerful, but has certain
limitations such as poor reliability and the need for constant recalibration.
This thesis suggests an alternative method for evaluating internal fruit quality
based on low-field nuclear magnetic resonance detected by superconducting
quantum interference devices. It introduces the theory of SQUIDs and NMR,
and evaluates the use of SQUID detected NMR spectroscopy as a method
for determining the internal quality of fruit. The fabrication techniques and
processes are explained in detail and a design for a SQUID detected NMR
spectrometer is given. Relevant simulations and simulation results are also given. No working SQUID could be fabricated and, as such, no working NMR
spectrometer was demonstrated. This thesis serves as a reference work for
future research. / AFRIKAANSE OPSOMMING: Bepaling van die gehalte van vrugte het vir boere uiters belangrik geword.
Met kleinhandelaars wat al strenger vereistes plaas op vars produkte moet
boere meer tyd en inspanning bestee met die sortering en gradering van hul oes.
Handelaars plaas nie net vereistes op eksterne kwaliteitsfaktore soos kleur en
fermheid nie, maar begin al hoe strenger vereistes plaas op interne kwaliteitsfaktore
soos suikerinhoud en suurgehalte, want, hoewel verbruikers vrugte koop
op grond van hul eksterne kwaliteitsfaktore, is dit die smaak van die vrug wat
bepaal of die verbruiker weer die vrug sal koop. Verskillende tegnieke bestaan
wat die interne kwaliteit van vrugte op ’n nie-destruktiewe manier kan bepaal.
Die mees algemene tegniek is Naby Infrarooi Spektroskopie. Hierdie tegniek is
kragtig maar het sekere beperkings soos swak betroubaarheid en die noodsaaklikheid
van konstante herkalibrasie. Hierdie tesis stel ’n alternatiewe metode vir
die evaluering van interne vrugkwaliteit gebaseer op lae-veld kernmagnetiese
resonans waargeneem deur supergeleidende kwantum inmenging toestelle voor.
Dit stel die teorie van SKWITs en KMR bekend, en evalueer die gebruik van
SKWIT-bespeurde KMR spektroskopie as ’n metode vir die bepaling van die interne kwaliteit van vrugte. Die fabrikasie tegnieke en prosesse word in detail
verduidelik en ’n ontwerp vir ’n SWKIT opgevangde KMR spektrometer word
gegee. Toepaslike simulasies en simulasie resultate word ook gegee. Geen werkende
SKWIT kon vervaardig word nie en as gevolg daarvan kon geen werkende
KMR spektrometer gedemonstreer word nie. Hierdie tesis dien as ’n naslaan
werk vir toekomstige navorsing.
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