Title: Application of Molecular Simulations in Complex Structural Analysis of Layered Materials Author: RNDr. Marek Veteška Department: Department of Chemical Physics and Optics Supervisor: RNDr. Miroslav Pospíšil, Ph.D., Dept. of Chemical Physics and Optics Abstract: Techniques of molecular simulations were used together with experimental measurements (X-ray diffraction, thermogravimetry, infrared spectroscopy, elemental analysis and others) to clarify the structure properties of various types of layered materials. The structure of Zn-Al-layered double hydroxide intercalated by pyrenetetra- sulfonate acid was solved. Depending on the relative humidity, the samples showed different arrangements with three planes of water molecules and with either one or two planes of pyrenetetrasulfonate anions. At the same time considerable variability of anions arrangement was demonstrated. The adsorption behavior of natural montmorillonite and montmorillonite modified by tetramethylammonium cations in relation to aniline and phe- nol was explored. Adsorption features differed according to both the type of adsorbed molecules and the type of adsorbents. An important role was played by the plane of water molecules right above the surface which medi- ated adsorption of anilines. The water plane area was reduced by...