<p> The white-tipped dove (<i>Leptotila verreauxi</i>) is a sedentary, secretive columbid that ranges from Argentina to the Lower Rio Grande Valley (LRGV) of south Texas. Since its designation as a game species in 1984, little research has been dedicated to the species&rsquo; reproductive ecology. My objectives were to (1) identify predators of white-tipped dove eggs and nestling, (2) determine how the predator community differs among land cover types, (3) examine the impact of vegetation and landscape variation in both citrus and woodland land cover types on nest survival, (4) examine the impact of temporal variation on nest survival, (5) provide information on general nest ecology that is currently lacking, (6) investigate movements of doves and examine feasibility of tracking and recapture using a GPS/VHF transmitters pilot study. During the summers of 2015 and 2016, I conducted nest searches in citrus and woodland sites in Hidalgo County, Texas. I placed real-time, infrared emitting camera systems on a subset of nests to monitor predation. I also trapped, banded, and placed backpack transmitters on doves in Estero Llano Grande State Park (ELGSP) In the 2 years, I located 63 dove nests, 34 in citrus and 29 in woodland. I placed camera systems on 33 nests and identified 9 species of nest predator. Green jays (<i>Cyanocorax incas</i>) were our most common nest predator, accounting for 10 of 28 predation events. Other predators were crested caracara (<i>Caracara cheriway</i>), Harris&rsquo;s hawk (<i>Parabuteo unicinctus</i>), great-tailed grackle (<i>Quisicalus mexicanus</i>), tawny crazy ant (<i> Nylanderia fulva</i>), rat (<i>Rattus</i> spp.), opossum (<i> Didelphis virginiana</i>), house cat (<i>Felis catus</i>), and Texas indigo snake (<i>Drymarchon melanurus erebennus</i>). Based on AIC candidate model selection, I identified nest stage as the best predictor of daily nest survival rate across both land cover types. By separating land covers for a second step to model selection, I identified different environmental variables as predictors of daily survival rate in each land cover type. In the woodland site, my null model was most important, indicating that no measured variables were important for predicting nest survival. In citrus, canopy cover was the top model. In citrus, a diverse predator community due to heavy human disturbance may have increased the importance of canopy cover and other concealment variables for nest survival. The different predator communities they encounter in the two land cover types that they nest in prioritize much different environmental conditions for nest survival.</p>

<p> Southern flying squirrels (SFS; <i>Glaucomys volans</i>) are known kleptoparasites on the endangered red-cockaded woodpecker&rsquo;s (RCW; <i> Picoides borealis</i>) cavities and cost land managers time and money to control, and the ecology of SFS in habitats managed for RCWs is poorly understood. This study is designed to obtain a better understanding of the general ecology of SFSs surrounding RCW habitat and provide possible non-lethal deterrent methods to prevent harmful interactions between SFSs and RCWs. Spatially-explicit capture-recapture showed generally higher SFS densities and habitat associations outside of RCW cluster partitions. Stable isotope analysis of SFS diets across Mississippi and Alabama revealed a narrow dietary breath relative to food items, thus habitat management may still be viable option to control SFSs. Lastly, investigation of odor deterrents resulted in the greatest avoidance of cavities containing gray rat snake (<i>Pantherophis spiloides </i>) feces and warrants further investigation.</p><p>

The Hudson River estuary (HRE) is a well monitored aquatic resource and much secondary data exist for this system. We developed two objectives based on accessible HRE aquatic data. The first objective was to determine if changes in HRE fish community over the time period (1974 to 2005) years are correlated to local and regional climate. We addressed this objective by employing a multivariate statistical approach. We confirmed that the HRE fish community structure has changed over the time period (1974 to 2005). These changes are correlated with local hydrology (freshwater flow and water temperature) and regional climate (Atlantic Multidecadal Oscillation or AMO and North Atlantic Oscillation or NAO). We found that abundances of striped bass larval stages are positively correlated with high freshwater flows and juvenile shad abundances are negatively correlated with the AMO or warmer sea surface temperatures (SST). This finding suggests that climate-related variability affects HRE juvenile shad abundances and current management strategies for this declining species should include the implications of climate change. The second objective was to examine whether factors such as sediment type, water characteristics and distance to nearest submerged aquatic vegetation (SAV) beds affect the occurrence or presence/absence of juvenile American shad (Alosa sapidissima) and juvenile striped bass ( Morone saxatilis) in the HRE during the fall. We addressed this objective by applying geostatistics and general linear mixed effects models. We found the probability of presence for both species were commonly driven by spatial dependence or river mile, Julian day and salinity. Our results include maps depicting probability of occurrence (or presence) for both species throughout the HRE. We found the highest predicted probabilities of juvenile American shad presence are found in the Upper HRE. Conversely, highest predicted probabilities of juvenile striped bass presence are found in the Lower HRE. Habitat partitioning between these two species is present during the fall in this system but the mechanism is unclear. Future studies could address a possible predator-prey or competitive relationship between juvenile American shad and juvenile striped bass.

Anyone who has spent time in coastal New England has seen gulls flying overhead and heard their familiar sound; gulls may be one of the most recognizable birds in the world. There are over 50 species of gulls worldwide, and many of them are closely associated with human development or activities. In Massachusetts, there are several common gull species including herring (Larus argentatus), great black-back (Larus marinus), laughing (Leucophaeus atricilla), and ring-billed (Larus delawarensis). While coastal encounters with gulls are ubiquitous, gulls can also be found inland, and ring-billed and herring gulls are now a common sight at lakes, parks, and commercial parking lots dozens or hundreds of kilometers from the ocean. This inland population of gulls presents unique challenges and exciting research opportunities. Because they are often closely associated with human activity, concentrations of inland gulls can lead to potential water quality concerns (when large roosts form on public water supply reservoirs), airplane hazards (when groups of gulls concentrate near airports or flight paths), or disease transmission (when gulls forage at landfills or waste water treatment plants then visit areas with people). In the following chapters I explore various aspects of inland gull ecology during the non-breeding season. In chapter 1, I review the concept of philopatry in birds and discuss ways to assess site faithful behavior. In Chapters 2 and 3, I explore some of the ecological aspects of inland gulls. Chapter 2 examines the site fidelity of gulls to their wintering areas and my results suggest that gulls exhibit high winter-site fidelity but variable site persistence during the winter season. Chapter 3 explores roost site selection throughout the year and models roost selection in Massachusetts. My results indicate that ring-billed gulls prefer freshwater roosts, while herring gulls use saltwater roosts more often. In Massachusetts, both herring and ring-billed gulls select inland freshwater roosts based on the size of the water body and proximity to their last daytime location. In Chapter 4, I detail the results of an experimental study trying to reduce the amount of anthropogenic food available to gulls at inland parking lots. Ring-billed gulls were the most common gull found in parking lots, and my educational approach to reduce feedings had mixed results; education seemed to reduce the number of feedings in some cases, but the number of gulls in each parking lot was not affected. In Chapters 5 and 6, I detail some applied management techniques. Chapter 5 discusses efforts to exclude gulls from a waste water treatment plant in central Massachusetts. Overhead stainless-steel wires were completely effective at preventing gulls from using structures at the treatment plant. Chapter 6 describes an innovative technique that was used to efficiently and effectively catch gulls during winter in highly urbanized environments. I captured over 1000 gulls using a net launcher in various parking lots and other urban areas.

<p> This study investigates the population dynamics, movements, and habitat use of a population of western pond turtles in Orange County, California from 2008-2012 using radio telemetry and mark-recapture data. Western pond turtles have been thought to be declining throughout their range. However, few studies have documented their status in southern California, where urbanization has changed the landscape drastically in recent decades. I individually marked 236 pond turtles using hoop-net funnel traps and estimated the population size at 308 individuals, which is the largest estimate reported in southern California. Mean capture per unit effort was 5.03&plusmn;0.87. Mean female carapace length (CL) (142&plusmn;14mm) was not significantly larger than males (139&plusmn;14 mm). I also documented 20 nest and 9 estivation locations. Mean distances included 176 &plusmn;130.80 meters (m) and 91&plusmn;58.6 m. These data identify the population demography, which can be a metric of population stability. Other known populations need to be estimated to determine their regional status.</p>

<p> Conserving bird populations in urban landscapes often depends on interactions between extinction, recolonization, and survival in remnant habitat patches such as small nature preserves. Thus, determining the ecological value of small nature preserves to birds is a necessary step towards an informed conservation strategy. As such, I conducted a year round capture-mark-recapture study from April 2010 to March 2014 to examine population dynamics of Northern Cardinals (<i>Cardinalis cardinalis</i>) and Carolina Wrens (<i> Thryothorus ludovicianus</i>) in a 41.7-ha nature preserve embedded in an urban matrix. More specifically, we examined variation in survival, recruitment, and realized population growth rates relative to year, season, sex, age, and wing length (as a proxy for body size) to investigate attributes that affect individual survival and to assess whether the reserve served as a population source or sink. The overall annual apparent survival rate of Northern Cardinals (0.520 &plusmn; SE 0.050) was higher than that of the Carolina Wrens (0.349 &plusmn; 0.050), and estimates in both species were similar to regional baseline estimates. The survival rates for adults were significantly higher than for immatures in both species, with body size having a positive influence on survival. Seasonal variation in survivorship was evident only in Northern Cardinals, being highest in the winter and lowest during the breeding season. Average annual population growth rate was slightly greater than 1.0 for both species, indicating stable or perhaps modestly increasing populations. These results represent the first published full annual cycle estimates of survival and population growth relative to age, sex, and body size for non-migratory passerines. Our results suggest that urban forests can provide the necessary resources to sustain growing populations of locally common birds. Furthermore, our demographic estimates derived from two healthy bird populations can serve as target values for other species of conservation concern within human-modified landscapes. </p>

<p> The coastal temperate rainforest is one of the rarest ecosystems in the world, and a major portion of the global total is found in Southeast Alaska. In this ecosystem, Sitka black-tailed deer are the dominant large herbivore, influencing large carnivores that prey on deer such as wolves and bears, as well as plant species and communities through browsing. In addition, deer play an important economic and cultural role for humans in Southeast Alaska, making up the large majority of terrestrial subsistence protein harvested each year as well as providing the backbone of a thriving tourism industry built around sport hunting. Given the importance of deer in this system, there remain a surprisingly large number of key gaps in our knowledge of deer ecology in Southeast Alaska. </p><p> These knowledge gaps are potentially troubling in light of ongoing industrial timber-harvest across the region, which greatly alters habitat characteristics and value to wildlife. This dissertation research project was undertaken with the aim of filling several connected needs for further understanding deer ecology, specifically 1) patterns of reproduction and fawn survival, 2) population dynamics in response to environmental variability, and the underlying drivers of spatial selection during 3) reproduction and 4) winter. To fill these knowledge gaps, I developed robust statistical tools for estimating rates of fawn survival, and found that fawns must be captured at birth, rather than within several days of birth, in order to produce unbiased estimates because highly vulnerable individuals died quickly and were thus absent from the latter sample. I then use this robust approach to estimate vital rates, including fawn survival in winter and summer, and developed a model of population dynamics for deer. I found that winter weather had the strongest influence on population dynamics, via reduced over-winter fawn survival, with mass at birth and gender ratio of fawns important secondary drivers. </p><p> To better understand deer-habitat relationships, I examined both summer and winter habitat selection patterns by female deer. Using summer-only data, I asked how reproductive female deer balance wolf and bear predation risk against access to forage over time. Predation risks and forage were strong drivers of deer spatial selection during summer, but reproductive period and time within reproductive period determined deer reaction to these drivers. To ensure adequate reproductive habitat for deer, areas with low predation risk and high forage should be conserved. Focusing on winter, I evaluated deer spatial selection during winter as a response to snow depth, vegetation classes, forage, and landscape features. I allowed daily snow depth measures to interact with selection of other covariates, and found strong support for deer avoidance of deep snow, as well as changes in deer selection of old-growth and second-growth habitats and landscape features with increasing snow depth. Collectively, this dissertation greatly improves our understanding of deer ecology in Alaska, and suggests habitat management actions that will help ensure resilient deer populations in the future.</p>

<p> Size-at-age of Pacific Halibut (<i>Hippoglossus stenolepis</i>) has declined significantly since the 1980s. For instance, the average weight of a 20-year-old female declined from 55 kg in 1988 to 20 kg in 2014. The decline in size-at-age corresponds to a period of declining Pacific Halibut recruitment, spawning biomass, and reductions in catch limits for the directed commercial Pacific Halibut longline fishery. The causes of changes in Pacific Halibut size-at-age are poorly understood. Our project investigates several hypotheses related to declines in size-at-age, including the effects of environmental and ecological variability on growth, and the cumulative effects of harvest and size-selective fishing. Specific potential environmental covariates include the Pacific Decadal Oscillation, which is an index of basin-wide sea surface temperatures, and summer sea surface temperatures along the continental shelf of the Gulf of Alaska. Specific ecological variables include annual biomass estimates of Arrowtooth Flounder (<i>Atheresthes stomias</i>) and Pacific Halibut to investigate the potential role of inter- and intraspecific competition, respectively. We used a population modeling approach to simulate the effects of fishing on size-at-age. We found that the large increase in Arrowtooth Flounder biomass since the 1970s corresponds to declines in Pacific Halibut size-at-age. Our results also suggest that periods of high Pacific Halibut biomass relates to poor growth and low size-at-age. Finally, we found that harvest and size-selective fishing explains between 30 and 65% of observed declines since the 1980s in the Gulf of Alaska, and up to 100% of the declines in Southeast Alaska and British Columbia where harvest rates were high in the 1990s and 2000s. Our findings have implications for fisheries management, including balancing tradeoffs associated with size limits, and understanding how changes in environmental and ecological conditions can shift management reference points such as maximum sustainable yield.</p>

<p> I studied current educational efforts about urban wildlife in Tucson, Arizona using three main approaches: a) interviews with key informants, b) analysis of the dissemination of and reaction to informative booklets about urban wildlife, and c) a review of regionally-relevant news articles published online from 2013 to 2015. These triangulated research efforts provide a general snapshot of the relative effectiveness of urban wildlife education practices and result in suggestions for improvement with future efforts. Key informants provided insight into successful human-wildlife conflict resolution and avoidance techniques and successful education practices. An analysis of the dissemination of information on living with urban wildlife, revealed that 53% of the small participating businesses valued the effort and requested additional booklets for their clients. All 45 of the recipients of the educational booklet found them useful and 65% cited them as their only such source of information about wildlife. Thus, I recommend additional concerted dissemination of such materials towards improved education of the public about urban wildlife interactions. Analysis of online news articles revealed that 51% focused on human-wildlife conflicts and, of these, 30% contained information about conflict avoidance. By contrast, 35% of all articles reviewed were strictly educational and yet, of these, 74% addressed conflict avoidance. Thus, I recommend that future media efforts continue this focus on human-wildlife conflict avoidance and resolution strategies. The culmination of this work demonstrates that much work is being conducted towards urban wildlife education and revealed education projects and strategies that may be applied in the future to help facilitate an informed coexistence with urban wildlife.</p>

<p> Identifying species occurrence in ecosystems of high conservation concern is especially important in the context of modern landscapes. This study investigated how stand-scale and landscape-scale factors affect priority birds associated with longleaf pine (<i>Pinus palutris</i>) ecosystems. Herein, I compared priority bird occupancy among 12 stand types throughout the historic range of longleaf pine. I found open pine stands positively influenced red-cockaded woodpecker (<i>Picoides borealis</i>) and Bachman&rsquo;s sparrow (<i>Peucaea aestivalis</i>) occupancy, but were not significantly linked to northern bobwhite (<i>Colinus virginianus</i>) and brown-headed nuthatch (<i>Sitta pusilla</i>) occurrence. Landscape- and stand-scale factors affected red-cockaded woodpecker, Bachman&rsquo;s sparrow, and brown-headed nuthatch occupancy. Northern bobwhite occupancy was influenced solely by landscape-scale factors. Red-cockaded woodpecker and Bachman&rsquo;s sparrow were positively influenced by metrics associated with longleaf pine ecosystems suggesting they are effective indicator species. My analysis indicates that using this multi-scale approach is valuable to identifying areas on the landscape of conservation and restoration priority.</p>