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Functional and biochemical characterization of GmCLC1.

Wong, Tak Hong. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2011. / Includes bibliographical references (leaves 96-104). / Abstracts in English and Chinese. / Thesis Committee --- p.i / Statement --- p.ii / Abstract --- p.iii / Chinese Abstract --- p.v / Acknowledgements --- p.vii / Abbreviation --- p.ix / Table of Content --- p.xi / List of figures --- p.xiv / List of tables --- p.xv / Chapter 1. --- Introduction --- p.1 / Chapter 1.1 --- Problem of soil salinization and sodification: reducing crop productivity --- p.1 / Chapter 1.2 --- Effects of high salinity on plant growth --- p.2 / Chapter 1.2.1 --- Ion toxicity --- p.2 / Chapter 1.2.2 --- Osmotic stress --- p.3 / Chapter 1.2.3 --- Oxidative stress --- p.3 / Chapter 1.3 --- Overview of salt tolerance mechanisms in plant --- p.4 / Chapter 1.3.1 --- Maintenance of ion homeostasis --- p.4 / Chapter 1.3.2 --- Maintaining osmotic homeostasis --- p.5 / Chapter 1.3.3 --- Detoxification of Reactive oxygen species --- p.5 / Chapter 1.4 --- The important role of CI- in plant salt stress tolerance research --- p.6 / Chapter 1.5 --- Introduction to chloride channel (CLC) family --- p.7 / Chapter 1.6 --- E. coli CLC-ecl: The first CLC member found to function as antiporter --- p.8 / Chapter 1.7 --- Yeast GEF1: eukaryotic model for early plant CLC complementation studies --- p.9 / Chapter 1.8 --- Mammalian CLC family: 4 channels and 5 antiporters --- p.10 / Chapter 1.8.1 --- CLC-4 and -5: First eukaryotic CLC member found to be function as antiporter --- p.13 / Chapter 1.8.2 --- CLC-7 function as antiporter and regulate lysosomal acidification --- p.13 / Chapter 1.8.3 --- "CLC-6 select nitrate over chloride, unlike other mammalian CLC members" --- p.14 / Chapter 1.9 --- Introduction to Plant CLC members --- p.14 / Chapter 1.10 --- Tobacco CLC-Ntl co-localized with mitochondrial markers in plant and may cause current on Xenopus oocytes membrane --- p.15 / Chapter 1.11 --- Rice CLCs may involved in salt tolerenace and growth regulation --- p.16 / Chapter 1.12 --- Arabidopsis CLC members are extensively studied --- p.18 / Chapter 1.12.1 --- AtCLCa regulates nitrate accumulation --- p.20 / Chapter 1.12.2 --- "AtCLCb, a nitrate/proton antiporter with unclear physiological role" --- p.22 / Chapter 1.12.3 --- "AtCLCc selective chloride over nitrate, involved in salt tolerance" --- p.23 / Chapter 1.12.4 --- AtCLCd and AtCLCf both localized on Golgi network --- p.25 / Chapter 1.12.5 --- AtCLCe may regulate ionic strength of chloroplast thylakoid membrane --- p.26 / Chapter 1.13 --- Previous work in Prof. Lam's laboratory --- p.26 / Chapter 1.14 --- "Reason, Hypothesis, Objective and long term significance" --- p.28 / Chapter 2. --- Materials and Methods --- p.30 / Chapter 2.1 --- Materials --- p.30 / Chapter 2.1.1 --- "Bacterial strains, animals, plants and plasmid vectors" --- p.30 / Chapter 2.1.2 --- Chemicals and Enzymes --- p.33 / Chapter 2.1.3 --- Commercial kits --- p.33 / Chapter 2.1.4 --- Primers --- p.35 / Chapter 2.1.5 --- Equipments and facilities used --- p.36 / Chapter 2.1.6 --- "Buffer, solution, gel and medium" --- p.36 / Chapter 2.1.7 --- Software --- p.36 / Chapter 2.2 --- Methods --- p.37 / Chapter 2.2.1 --- Growth and treatment of soybean seedling --- p.37 / Chapter 2.2.2 --- RNA extraction from root tissue --- p.37 / Chapter 2.2.3 --- RNA denaturing gel electrophoresis --- p.39 / Chapter 2.2.4 --- Generation and testing of single-stranded DIG-labeled PCR probes --- p.39 / Chapter 2.2.5 --- Northern blot analysis --- p.41 / Chapter 2.2.6 --- Transformation of V7/GmCLCl electro-competent Agrobacterium tumefaciens --- p.42 / Chapter 2.2.7 --- PCR screening of transformed Agrobacterium tumefaciens colonies --- p.43 / Chapter 2.2.8 --- DNA gel electrophoresis --- p.43 / Chapter 2.2.9 --- Agrobacterium-mediated transformation of tobacco BY-2 cells --- p.44 / Chapter 2.2.10 --- Verifying the expression of GmCLCl in transgenic tobacco BY-2 cells --- p.45 / Chapter 2.2.11 --- Salt treatment of tobacco BY-2 cells and cell viability assay --- p.46 / Chapter 2.2.12 --- Subcloning of GmCLCl cDNA into pgh21 vector --- p.47 / Chapter 2.2.13 --- In vitro synthesis of GmCLCl cRNA --- p.51 / Chapter 2.2.14 --- Obtaining oocyte from Xenopus laevis ovaries --- p.52 / Chapter 2.2.15 --- Microinjection of GmCLCl cRNA into Xenopus oocyte and oocyte incubation --- p.53 / Chapter 2.2.16 --- Two electrode voltage clamp of Xenopus oocytes --- p.54 / Chapter 3. --- Results --- p.56 / Chapter 3.1 --- Phylogenetic analysis of GmCLCl --- p.56 / Chapter 3.2 --- Expression of GmCLCl in root was induced by NaCl and alkaline condition --- p.60 / Chapter 3.3 --- Construction of GmCLCl transgenic tobacco BY-2 cell line --- p.62 / Chapter 3.4 --- GmCLCl improve NaCl stress tolerance of transgenic tobacco BY-2 cells in a pH dependent manner --- p.67 / Chapter 3.5 --- Subcloning of GmCLCl into pgh21 --- p.70 / Chapter 3.6 --- GmCLCl cRNA synthesis by in vitro transcription --- p.72 / Chapter 3.7 --- Two electrode voltage clamp (TEVC) of GmCLCl cRNA injected Xenopus oocytes --- p.75 / Chapter 4. --- Discussion --- p.81 / Chapter 4.1 --- Implications from phylogenetic and sequence analysis on the function of GmCLCl --- p.81 / Chapter 4.2 --- Electrophysiological characterization of GmCLC 1 by Xenopus oocytes --- p.82 / Chapter 4.3 --- Some plant CLCs contributed in salt tolerance response --- p.84 / Chapter 4.4 --- Relationship between pH and physiological function of plant CLCs --- p.85 / Chapter 5. --- Conclusion and Perspectives --- p.88 / Chapter 6. --- Appendices --- p.90 / Chapter Appendix I: --- Major Chemicals and reagents used in this research --- p.90 / Chapter Appendix II: --- Enzymes used in this research --- p.92 / Chapter Appendix III: --- Major equipment and facilities used in this research --- p.93 / Chapter Appendix IV: --- "Buffer, solution, gel and medium formulation" --- p.94 / Chapter 7. --- References --- p.96

Identiferoai:union.ndltd.org:cuhk.edu.hk/oai:cuhk-dr:cuhk_327580
Date January 2011
ContributorsWong, Tak Hong., Chinese University of Hong Kong Graduate School. Division of Life Sciences.
Source SetsThe Chinese University of Hong Kong
LanguageEnglish, Chinese
Detected LanguageEnglish
TypeText, bibliography
Formatprint, xv, 104 leaves : ill. (some col.) ; 30 cm.
RightsUse of this resource is governed by the terms and conditions of the Creative Commons “Attribution-NonCommercial-NoDerivatives 4.0 International” License (http://creativecommons.org/licenses/by-nc-nd/4.0/)

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