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Biologically plausible visual representation of modular decomposition

Modular decompositions of protein interaction networks can be used to identify modules of cooperating proteins. The biological plausibility off these modules might be questioned though. This report describes how a modular decomposition can be completed with semantic information in the visual representation. Possible methods for creating modules of functionally related proteins are also proposed in this work. The results show that such modules, with advantage can be combined with modules from a graph decomposition, to find proteins that are likely to cooperate to perform certain functions in organisms

Identiferoai:union.ndltd.org:UPSALLA1/oai:DiVA.org:his-953
Date January 2005
CreatorsRahm, Jonas
PublisherHögskolan i Skövde, Institutionen för kommunikation och information, Skövde : Institutionen för kommunikation och information
Source SetsDiVA Archive at Upsalla University
LanguageEnglish
Detected LanguageEnglish
TypeStudent thesis, info:eu-repo/semantics/bachelorThesis, text
Formatapplication/postscript, application/pdf
Rightsinfo:eu-repo/semantics/openAccess, info:eu-repo/semantics/openAccess

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