Health is a fundamental human right. To increase global health, research in the medical sector is of great importance. Decreasing time consumption of biomedical testing could accelerate the research and development of new drugs and vaccines. This could be achieved by automation of biomedical analysis, using computerized methods. In order to perform analysis on pictures of biomedical tests, it is important to identify the area of interest (AOI) of the test. For example, cells and bacteria are commonly grown in petri dishes, in this case the AOI is the bottom area of the dish, since this is where the object of analysis is located.This study was performed with the aim to compare a few computerized methods for identifying the AOI in pictures of biomedical tests. In the study, biomedical images from a testing method called ELISpot have been used. ELISpot uses plates with up to 96 circular wells, where pictures of the separate wells were used in order to find the AOI corresponding to the bottom area of each well. The focus has been on comparing the performance of three edge detection methods. More specifically, their ability to accurately detect the edges of the well. Furthermore, a method for identifying a circle based on the detected edges was used to specify the AOI.The study shows that methods using second order derivatives for edge detection, gives the best results regarding to robustness.
| Identifer | oai:union.ndltd.org:UPSALLA1/oai:DiVA.org:kth-254257 |
| Date | January 2019 |
| Creators | Modahl, Ylva, Skoglund, Caroline |
| Publisher | KTH, Skolan för elektroteknik och datavetenskap (EECS) |
| Source Sets | DiVA Archive at Upsalla University |
| Language | Swedish |
| Detected Language | English |
| Type | Student thesis, info:eu-repo/semantics/bachelorThesis, text |
| Format | application/pdf |
| Rights | info:eu-repo/semantics/openAccess |
| Relation | TRITA-EECS-EX ; 2019:141 |
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