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Community Composition of Nitrite Reductase Genes in an Acid Mine Drainage Environment

<p> High elevation, mountainous regions have a high concentration of mining activities and resulting acid mine drainage (AMD) that is typically acidic and often contains elevated concentrations of metals. The impacts of AMD on denitrifying microbial communities is not well understood, despite these organisms&rsquo; central role in the nitrogen cycle, contribution to greenhouse gas production, and potential to provide ecosystem services through the mitigation of nitrogen pollution. This study examined denitrifying microbes across four regions within the Iron Springs Mining District (13 sites over four time-points) located in Southwest Colorado at high elevation that receive AMD or naturally-occurring acid rock drainage (ARD). Denitrification functional gene sequences (<i> nirS</i> and <i>nirK</i> coding for nitrite reductase) had a high number of observed OTUs (260 for <i>nirS</i> and 253 for <i> nirK</i>) and were observed at sites with pH as low as 3.2, dissolved oxygen as low as 1.0 mg/L, and metals >10 mg/L (including aluminum, iron, manganese, and zinc). A majority of the <i>nirK</i> and <i> nirS</i> OTUs (> 60%) were present in only one sampling region. Approximately 8% of the <i>nirK</i> and <i>nirS</i> OTUs had a more cosmopolitan distribution with presence in three or more regions. Phylogenetically related OTUs were found across sites with very different chemistry. The total <i>nirS</i> community structure was correlated to iron, conductivity, sodium, and calcium, which may suggest that these factors play an important role in shaping the <i>nirS</i> community. Overall, these findings improve upon our understanding of the potential for denitrification within an ecosystem impacted by AMD and provide a foundation for future research to understand the rates and physiology of these denitrifying organisms.</p><p>

Identiferoai:union.ndltd.org:PROQUEST/oai:pqdtoai.proquest.com:10607867
Date19 October 2017
CreatorsWise, Ben
PublisherUniversity of Colorado at Denver
Source SetsProQuest.com
LanguageEnglish
Detected LanguageEnglish
Typethesis

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