The progress of studies on genes concerning the development and differentiation of early swine embryos have been delayed by limited paucity material. In order to identify the porcine ESTs associates with promoting its breeding efficiency, a cDNA library and ESTs database from oocytes of high reproductive swine is established. Oocytes were obtained from Duroc pig by superovulation which was performed by Taiwan Livestock Research Institute, Council of Agriculture. Total RNA was isolated from 50 mature oocytes, reverse transcription is then performed, followed by PCR based amplification of the cDNA. The amplified cDNA size ranges from 0.4 to 5 kb. The derived cDNA were ligated to a pCR2.1 vector, and the library has complexities of about 5.26¡Ñ104 independent clones. A total of 320 clones was picked and sequenced. By BLASTx analysis, among the 123 sequences, more than 43.07%¡]53/123¡^ mitochondrial proteins are found, 56.91¢H¡]70/123¡^ of the sequence were homologous to known transcripts from human, mouse, Drosophila. In nucleotide level analysis, 82.11¢H¡]101/123¡^ matched with the mitochondrial, ribosome genes and 17.89¢H¡]22/123¡^matched with other homologous genes by BLASTn. PCR analysis of the oocyte library for specific genes revealed transcripts for genes including homologous genes¡]2 pairs highly abundance and 2 pairs low abundance genes¡^, housekeeping genes¡]ACT£] and G3PDH¡^ and developmental genes¡]NEK2 and ZP1¡^. However, novel genes of swine are supposed to be the candidates for high productive phenotypes of swine. The library is a valuable resource for the isolation of clones representing genes active at the early stage. The ability to construct cDNA expression library from a few cells will allow gene expression analysis from oocyte biopsies and derived by nuclear transfer procedures.
| Identifer | oai:union.ndltd.org:NSYSU/oai:NSYSU:etd-0727104-121429 |
| Date | 27 July 2004 |
| Creators | Su, Yu-liang |
| Contributors | Hurng-wern Huang, Lih-ren Chen, Yow-ling Shiue |
| Publisher | NSYSU |
| Source Sets | NSYSU Electronic Thesis and Dissertation Archive |
| Language | Cholon |
| Detected Language | English |
| Type | text |
| Format | application/pdf |
| Source | http://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0727104-121429 |
| Rights | restricted, Copyright information available at source archive |
Page generated in 0.002 seconds