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Statistical patterns in the amino acid sequences of protein domains in two secondary structural classes. / 兩個二級蛋白質結構組中的氨基酸序列的統計特性 / Statistical patterns in the amino acid sequences of protein domains in two secondary structural classes. / Liang ge er ji dan bai zhi jie gou zu zhong de an ji suan xu lie de tong ji te xing

Wong Ka Shing = 兩個二級蛋白質結構組中的氨基酸序列的統計特性 / 黃嘉誠. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2004. / Includes bibliographical references (leaves 88-91). / Text in English; abstracts in English and Chinese. / Wong Ka Shing = Liang ge er ji dan bai zhi jie gou zu zhong de an ji suan xu lie de tong ji te xing / Huang Jiacheng. / Chapter 1 --- Introduction --- p.1 / Chapter 1.1 --- Predicting tertiary structures of proteins --- p.2 / Chapter 1.2 --- Introduction to secondary structures of protein --- p.5 / Chapter 1.3 --- Prediction of secondary structural classes --- p.9 / Chapter 1.3.1 --- Multi-dimensional space representation --- p.10 / Chapter 2 --- Method of analysis --- p.12 / Chapter 2.1 --- Data sets --- p.12 / Chapter 2.2 --- Basic statistics of the data sets --- p.13 / Chapter 2.3 --- Method of analysis --- p.17 / Chapter 2.4 --- An interesting sum rule --- p.20 / Chapter 3 --- Results of analysis of C-words --- p.22 / Chapter 3.1 --- A first insight --- p.22 / Chapter 3.2 --- Distributions of 〈C(j)〉 --- p.24 / Chapter 3.2.1 --- "Comparing distributions for different m, s and secondary structural classes" --- p.29 / Chapter 3.3 --- Features of each secondary structural class --- p.33 / Chapter 3.3.1 --- C-words with the largest or the smallest values of 〈C(j)〉 in the all-a class --- p.33 / Chapter 3.3.2 --- C-words with the largest or the smallest values of 〈C(j)〉 in the all-β class --- p.35 / Chapter 4 --- Results of analysis of H-words --- p.37 / Chapter 4.1 --- 〈C(j)〉 for each H-word --- p.38 / Chapter 4.1.1 --- "When m increases, 〈C(j)〉 deviates more from 1" --- p.39 / Chapter 4.1.2 --- "When spacing parameter s is small, 〈C(j)〉 deviates more from 1" --- p.40 / Chapter 4.2 --- The mean over all possible H-words --- p.41 / Chapter 4.3 --- Comparing 〈C(j)〉 of different H-words --- p.43 / Chapter 4.3.1 --- A few plots --- p.43 / Chapter 4.3.2 --- Results --- p.44 / Chapter 4.4 --- Features of each secondary structural class --- p.47 / Chapter 4.4.1 --- A first insight --- p.47 / Chapter 4.4.2 --- The H-words with the largest values of 〈C(j)〉 in the all-α class with particular number of letter m --- p.54 / Chapter 4.4.3 --- The H-words with the smallest values of 〈C(j) in the all-α class with particular number of letter m --- p.57 / Chapter 4.4.4 --- The H-words with the largest values of 〈C(j) in the all-β class with particular number of letter m --- p.60 / Chapter 4.4.5 --- The H-words with the smallest values of 〈C(j) in the all-β class with particular number of letter m --- p.63 / Chapter 4.4.6 --- A summary --- p.66 / Chapter 4.5 --- Possible indicators to predict secondary structural class --- p.67 / Chapter 4.5.1 --- H-words with the largest values of --- p.68 / Chapter 4.5.2 --- H-words with the largest magnitude of --- p.71 / Chapter 4.5.3 --- Discussion --- p.71 / Chapter 5 --- Prediction using patterns found in H-words --- p.72 / Chapter 6 --- Conclusion --- p.86 / Bibliography --- p.88

Identiferoai:union.ndltd.org:cuhk.edu.hk/oai:cuhk-dr:cuhk_324647
Date January 2004
ContributorsWong, Ka Shing., Chinese University of Hong Kong Graduate School. Division of Physics.
Source SetsThe Chinese University of Hong Kong
LanguageEnglish, Chinese
Detected LanguageEnglish
TypeText, bibliography
Formatprint, xvi, 91 leaves : ill. (some col.) ; 30 cm.
RightsUse of this resource is governed by the terms and conditions of the Creative Commons “Attribution-NonCommercial-NoDerivatives 4.0 International” License (http://creativecommons.org/licenses/by-nc-nd/4.0/)

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