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DTI-Based Network Analysis of Female APP/PS1 Mouse Brains

Diffusion tensor imaging (DTI) provides a map of diffusional anisotropy based on the Brownian motion of water within the restricted boundaries of tissues. In this work, a high angular resolution DTI acquired with 18 diffusion directions and four unweighted images was acquired using a 11.75-T, 500-MHz MRI scanner located at the FAMU-FSU College of Engineering in order to perform tractography in amyloid precursor protein/presenilin 1 (APP/PS1) mouse models of familial Alzheimer’s Disease. Evaluating phenotype (APP/PS1 versus wild type) and age (1, 2, 4 and 6 months), a structural network analysis was employed to assess DTI datasets acquired at an in-plane resolution was 100 x 100 microns with a matrix size of 256 x 256, repetition time of 2 s, echo time of 30 ms, diffusion gradient separation of 21 ms and diffusion gradient time of 3 ms. With 15 averages, high signal-to-noise ratios were achieved over an approximate acquisition time of 47 h per sample. This study used all female brains fixed with 4% paraformaldehyde. The five main neural areas of focus were the piriform area of the cortex, temporal cortex, parietal cortex, and left and right hippocampus. A significant decrease in FA of the temporal cortex was identified. Changes in the network metrics of weighted degree, eccentricity, clustering, betweenness centrality, and closeness centrality were observed as a function of age and phenotype. / A Thesis submitted to the Department of Chemical and Biomedical Engineering in partial fulfillment of the requirements for the degree of Master of Science. / Spring Semester 2018. / April 20, 2018. / Alzheimer's Disease, DTI, Graph Theory, MRI / Includes bibliographical references. / Samuel C. Grant, Professor Directing Thesis; Jingjiao Guan, Committee Member; Yan Li, Committee Member.

Identiferoai:union.ndltd.org:fsu.edu/oai:fsu.digital.flvc.org:fsu_654724
ContributorsHike, David (author), Grant, Samuel C. (professor directing thesis), Guan, Jingjiao (committee member), Li, Yan (committee member), Florida State University (degree granting institution), College of Engineering (degree granting college), Department of Chemical and Biomedical Engineering (degree granting departmentdgg)
PublisherFlorida State University
Source SetsFlorida State University
LanguageEnglish, English
Detected LanguageEnglish
TypeText, text, master thesis
Format1 online resource (71 pages), computer, application/pdf

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