Return to search

Comparative studies on salt tolerance related genes in soybean: a case study on GmPAP3.

by Wong Fuk Ling. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2004. / Includes bibliographical references (leaves 100-115). / Abstracts in English and Chinese. / Thesis committee --- p.i / Statement --- p.ii / Abstract --- p.iii / Chinese abstract --- p.v / Acknowledgements --- p.vii / Abbreviations --- p.ix / Table of contents --- p.xii / List of figures --- p.xvi / List of tables --- p.xvii / Chapter 1. --- Literature review / Chapter 1.1 --- Soybeans / Chapter 1.1.1 --- Economical importance of soybean --- p.1 / Chapter 1.1.2 --- History and origin of soybean --- p.4 / Chapter 1.1.3 --- Qualitative traits of cultivated and wild soybeans --- p.5 / Chapter 1.1.4 --- Soybean resource in China --- p.6 / Chapter 1.1.5 --- Salt tolerant soybeans in China --- p.6 / Chapter 1.2 --- Salinization as a global problem --- p.7 / Chapter 1.3 --- Toxicity of salt in plants --- p.8 / Chapter 1.4 --- Salt stress signal transduction in plants --- p.10 / Chapter 1.4.1 --- Ionic and osmotic stress signaling / Chapter 1.4.1.1 --- Ca2+ signaling --- p.11 / Chapter 1.4.1.2 --- The SOS pathway --- p.12 / Chapter 1.4.1.3 --- Protein kinase pathways --- p.13 / Chapter 1.4.1.4 --- Phospholipid signaling --- p.14 / Chapter 1.4.1.5 --- ABA signaling --- p.17 / Chapter 1.4.2 --- Detoxification signaling --- p.17 / Chapter 1.4.3 --- signaling to coordinate cell division ana expansion --- p.18 / Chapter 1.5 --- Plant adaptations in plants --- p.18 / Chapter 1.5.1 --- Ion homeostasis --- p.18 / Chapter 1.5.1.1 --- Reduction of Na+ influx into the cells --- p.19 / Chapter 1.5.1.2 --- Extrusion of Na+ out of the cell --- p.19 / Chapter 1.5.1.3 --- Vacuolar compartmentation of Na+ --- p.20 / Chapter 1.5.2 --- Osmotic adjustment --- p.20 / Chapter 1.5.3 --- Antioxidant protection --- p.21 / Chapter 1.5.4 --- Morphological and structural modification --- p.21 / Chapter 1.6 --- The relationship of salt stress and phosphorus deficiency --- p.22 / Chapter 1.7 --- The importance of phosphorus in plants --- p.25 / Chapter 1.8 --- The role of purple acid phosphatase (PAP) in plants --- p.25 / Chapter 1.9 --- PAPs in soybean --- p.27 / Chapter 1.10 --- Hypothesis and significance of this project --- p.27 / Chapter 2. --- Materials and methods / Chapter 2.1 --- Materials / Chapter 2.1.1 --- Plant materials --- p.29 / Chapter 2.1.2 --- The clones used in this work --- p.30 / Chapter 2.1.3 --- Growth media for soybeans --- p.31 / Chapter 2.1.4 --- Equipment and facilities --- p.31 / Chapter 2.1.5 --- Primers --- p.31 / Chapter 2.1.6 --- Chemicals and reagents --- p.31 / Chapter 2.1.7 --- Solutions --- p.32 / Chapter 2.1.8 --- Commercial kits --- p.32 / Chapter 2.1.9 --- Software --- p.32 / Chapter 2.2. --- Methods / Chapter 2.2.1 --- Growth and salt treatment condition / Chapter 2.2.1.1 --- Establishment a collection of typical salt tolerant and sensitive soybean varieties --- p.33 / Chapter 2.2.1.2 --- Samples for northern analysis of salt inducible genes --- p.33 / Chapter 2.2.1.3 --- Samples for characteristics of GmPAP3 gene --- p.35 / Chapter 2.2.1.4 --- Samples for oxidative stress test --- p.36 / Chapter 2.2.2 --- Total RNA extraction --- p.36 / Chapter 2.2.3 --- Denaturing gel electrophoresis of RNA --- p.38 / Chapter 2.2.4 --- Expression pattern analysis / Chapter 2.2.4.1 --- Preparation of single-stranded DIG-labeled PCR probes --- p.39 / Chapter 2.2.4.2 --- Testing the concentration of DIG-labeled probes --- p.40 / Chapter 2.2.4.3 --- Northern blot --- p.41 / Chapter 2.2.5 --- Soluble ions analysis --- p.42 / Chapter 2.2.6 --- Acid phosphatase activity assays --- p.42 / Chapter 2.2.7 --- Phylogenetic analysis and subcellular localization prediction of GmPAP3 --- p.43 / Chapter 3. --- Results / Chapter 3.1 --- Establishing a collection of typical salt tolerant and sensitive soybean varieties --- p.44 / Chapter 3.2 --- Characterization of salt inducible genes --- p.48 / Chapter 3.3 --- Characterization of GMPAP3 gene --- p.63 / Chapter 3.3.1 --- Phylogenetic studies of the GmPAP3 --- p.64 / Chapter 3.3.2 --- The salt-inducible GmPAP3 gene in soybean encodes a putative mitochondria-located PAP --- p.64 / Chapter 3.3.3 --- Expression of GmPAP3 was induced by NaCl stress but not P deficiency --- p.71 / Chapter 3.3.4 --- Expression of GmPAP3 was induced by oxidative stress --- p.80 / Chapter 4. --- Discussion --- p.82 / Chapter 4.1 --- A collection of typical salt tolerant and sensitive soybean varieties --- p.83 / Chapter 4.2 --- Inducibility of identified salt-inducible gene in different varieties --- p.85 / Chapter 4.2.1 --- The possible roles of identified salt-inducible genes --- p.85 / Chapter 4.2.2 --- Expression profiles of identified salt-inducible genes --- p.89 / Chapter 4.3 --- The novel gene GmPAP3 --- p.92 / Chapter 5. --- Conclusion and perspectives --- p.98 / References --- p.100 / Appendix I: Expression profiles of the salt inducible genes in root tissue of selected varieties --- p.116 / Appendix II: Major equipment and facilities used in this research --- p.124 / Appendix III: Major chemicals and reagents used in this research --- p.125 / Appendix IV: Major common solutions used in this research --- p.127

Identiferoai:union.ndltd.org:cuhk.edu.hk/oai:cuhk-dr:cuhk_324587
Date January 2004
ContributorsWong, Fuk Ling., Chinese University of Hong Kong Graduate School. Division of Biology.
Source SetsThe Chinese University of Hong Kong
LanguageEnglish, Chinese
Detected LanguageEnglish
TypeText, bibliography
Formatprint, xvii, 128 leaves : ill. ; 30 cm.
CoverageChina, China
RightsUse of this resource is governed by the terms and conditions of the Creative Commons “Attribution-NonCommercial-NoDerivatives 4.0 International” License (http://creativecommons.org/licenses/by-nc-nd/4.0/)

Page generated in 0.0024 seconds