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The expressional study of KCNA10.

Chan Ho Yu, Richard. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2003. / Includes bibliographical references (leaves 115-122). / Abstracts in English and Chinese. / Declaration --- p.i / Acknowledgements --- p.ii / Abstract --- p.iii / 摘要 --- p.v / Table of Contents --- p.vii / Chapter Chapter 1: --- Introduction --- p.1 / Chapter 1.1 --- Potassium Channels --- p.1 / Chapter 1.1.1 --- Potassium Ions --- p.1 / Chapter 1.1.2 --- Potassium Channels --- p.1 / Chapter 1.1.3 --- Structure of K Channels --- p.2 / Chapter 1.1.4 --- Classification ofK Channels --- p.3 / Chapter 1.1.5 --- Mechanisms Contributed to K Channel Functions and Diversity --- p.5 / Chapter 1.1.5.1 --- RNA Editing --- p.5 / Chapter 1.1.5.2 --- Alternative Splicing --- p.6 / Chapter 1.1.5.3 --- Heteromultimeric Assembly of Principal Subunits --- p.6 / Chapter 1.1.5.4 --- Auxiliary Subunits --- p.7 / Chapter 1.1.5.5 --- Posttranslational Modifications --- p.7 / Chapter 1.2 --- Voltage-gated Potassium (Kv) Channels --- p.9 / Chapter 1.2.1 --- Diversity of Kv Channel Structure --- p.9 / Chapter 1.2.2 --- Early Origin of the Kv Family --- p.10 / Chapter 1.2.3 --- Structural Diversity of Kv Channels in Drosophila --- p.11 / Chapter 1.2.4 --- Structural Diversity of Kv Channels in Mammals --- p.11 / Chapter 1.2.5 --- Phylogenetic Tree of Kv Family --- p.13 / Chapter 1.2.6 --- Tissue Expression of Kv Channels --- p.13 / Chapter 1.2.7 --- "Three Main Functions of Kv Channels as Signaling Proteins: Ion Permeation, Gating and Sensing" --- p.16 / Chapter 1.2.7.1 --- Ion Permeation --- p.16 / Chapter 1.2.7.2 --- Gating --- p.18 / Chapter 1.2.7.2.1 --- Gating at the S6 Bundle Crossing --- p.18 / Chapter 1.2.7.2.2 --- Ball-and-Chain Gating --- p.19 / Chapter 1.2.7.2.3 --- Gating at the Selectivity Filter --- p.19 / Chapter 1.2.7.3 --- Sensing Mechanisms --- p.20 / Chapter 1.2.7.3.l --- Voltage Sensor --- p.20 / Chapter 1.2.7.3.2 --- Gating Sensors for Ligands --- p.21 / Chapter 1.3 --- KCNA10 --- p.22 / Chapter 1.3.1 --- "Rabbit Homologue of KCNA10, Kcnl" --- p.22 / Chapter 1.3.2 --- Genomic Localization of Human KCNA10 --- p.23 / Chapter 1.3.3 --- Human Gene for KCNA10 --- p.23 / Chapter 1.3.4 --- Basic Kinetic and Pharmacological Properties of KCNA10 --- p.25 / Chapter 1.3.5 --- "Regulation of KCNAlO by KCNA4B, a β -subunit" --- p.27 / Chapter 1.4 --- Aim of the Present Study --- p.30 / Chapter Chapter2: --- Materials and Methods --- p.31 / Chapter 2.1 --- Molecular Sub-Cloning ofKCNAlO --- p.31 / Chapter 2.1.1 --- Polymerase Chain Reaction (PCR) ofKCNA10 Fragment from KCNA Clone --- p.10 / Chapter 2.1.2 --- Separation and Purification of PCR Products --- p.32 / Chapter 2.1.2.1 --- Separation --- p.32 / Chapter 2.1.2.2 --- Purification --- p.33 / Chapter 2.1.3 --- Polishing the Purified PCR Products --- p.33 / Chapter 2.1.4 --- Ligation of PCR Products and pPCR-Script Amp SK(+) Cloning Vector --- p.34 / Chapter 2.1.5 --- Transformation --- p.34 / Chapter 2.1.6 --- Preparing Glycerol Stocks Containing the Bacterial Clones --- p.35 / Chapter 2.1.7 --- Plasmid DNA Preparation --- p.35 / Chapter 2.1.8 --- Clones Confirmation --- p.36 / Chapter 2.1.8.1 --- Restriction Enzyme Digestion --- p.36 / Chapter 2.1.8.2 --- Automatic Sequencing --- p.37 / Chapter 2.2 --- In situ Hybridization --- p.39 / Chapter 2.2.1 --- Probe Preparation --- p.39 / Chapter 2.2.1.1 --- Antisense KCNA10 RNA Probe --- p.39 / Chapter 2.2.1.2 --- Sense KCNA10 RNA Probe (Control Probe) --- p.40 / Chapter 2.2.2 --- Testing of DIG-Labeled RNA Probes --- p.43 / Chapter 2.2.3 --- Paraffin Sections Preparation --- p.43 / Chapter 2.2.4 --- In situ Hybridization: Pretreatment --- p.44 / Chapter 2.2.5 --- "Pre-hybridization, Hybridization and Post-hybridization" --- p.45 / Chapter 2.2.5.1 --- Pre-hybridization --- p.45 / Chapter 2.2.5.2 --- Hybridization --- p.45 / Chapter 2.2.5.3 --- Post-hybridization --- p.46 / Chapter 2.2.6 --- Colourimetnc Detection of Human KCNA10 --- p.46 / Chapter 2.3 --- Cell Culture --- p.47 / Chapter 2.3.1 --- Human Kidney Proximal Epithelial Cell Line (OK) --- p.47 / Chapter 2.3.2 --- Mouse Micro-vessel Endothelial Cell Line (H5V) --- p.48 / Chapter 2.3.3 --- Mouse Neuroblastoma Cell Line (NG108-15) --- p.48 / Chapter 2.3.4 --- Human Bladder Epithelial Cell Line (ECV304) --- p.48 / Chapter 2.3.5 --- Human T Cell Leukemia Cell Line (Jurkat) --- p.49 / Chapter 2.4 --- Total RNA Extraction --- p.49 / Chapter 2.5 --- Reverse Transcription from Cell Line --- p.51 / Chapter 2.6 --- Polymerase Chain Reaction (PCR) ofKCNAl 0 Fragment from Frist Strand cDNA --- p.51 / Chapter 2.7 --- Northern Hybridization --- p.52 / Chapter 2.7.1 --- Probe Preparation --- p.52 / Chapter 2.7.2 --- Separating RNA on an Agarose Gel --- p.52 / Chapter 2.7.3 --- RNA Transfer and Fixation --- p.52 / Chapter 2.7.4 --- Hybridization --- p.54 / Chapter 2.7.5 --- Post-hybridization --- p.54 / Chapter 2.7.6 --- Chemiluminescent Detection --- p.55 / Chapter 2.8 --- Intracellular Free Calcium Ion ([Ca2+]i) Measurement by Confocal Imaging System --- p.56 / Chapter 2.8.1 --- Bathing Solutions --- p.56 / Chapter 2.8.2 --- Preparation of Cells for [Ca2+]i Measurement --- p.56 / Chapter 2.8.3 --- Confocal Imaging System --- p.57 / Chapter 2.8.3.1 --- Fluo-3/AM Dye Loading --- p.57 / Chapter 2.8.3.2 --- [Ca2+]i Measurement --- p.57 / Chapter Chapter3: --- Results --- p.59 / Chapter 3.1 --- Phylogenetic Tree Reconstruction ofKCNAl0 --- p.59 / Chapter 3.2 --- Hydropathy Analysis ofKCNAl0 --- p.60 / Chapter 3.3 --- Molecular Sub-Cloning ofKCNAl0 --- p.61 / Chapter 3.3.1 --- Polymerase Chain Reaction (PCR) ofKCNAl0 Fragment from KCNA10 Clone --- p.61 / Chapter 3.3.2 --- Clones Confirmation --- p.63 / Chapter 3.4 --- In situ Hybridization Analysis ofKCNAl0 mRNAExpression --- p.65 / Chapter 3.4.1 --- Expression ofKCNAl0 in Human Kidney (Nephron) --- p.66 / Chapter 3.4.2 --- Expression ofKCNAl0 in Human Cerebral Artery --- p.69 / Chapter 3.4.3 --- Expression ofKCNAl0 in Human Cerebellum --- p.71 / Chapter 3.4.4 --- Expression ofKCNAl0 in Human Hippocampus --- p.73 / Chapter 3.4.5 --- Expression ofKCNAl0 in Human Occipital Cortex --- p.75 / Chapter 3.4.6 --- Expression ofKCNAl0 in Human Esophagus --- p.77 / Chapter 3.4.7 --- Expression ofKCNAl0 in Human Lung --- p.79 / Chapter 3.4.8 --- Expression ofKCNAl0 in Human Thyroid Glands --- p.81 / Chapter 3.4.9 --- Expression ofKCNAl0 in Human Adrenal Glands --- p.83 / Chapter 3.4.10 --- Expression ofKCNAl0 in Human Spleen --- p.86 / Chapter 3.5 --- RT-PCR ofKCNAl0 Fragment from Different Tissues --- p.88 / Chapter 3.6 --- Northern Blot Analysis of KCNA10 in Different Tissues --- p.90 / Chapter 3.7 --- Effects of Blocking KCNA10 on Ca2+ influx in Human Renal Proximal Tubule Epithelial Cells --- p.91 / Chapter Chapter4: --- Discussion --- p.97 / Chapter 4.1 --- Phylogency ofKCNAlO --- p.97 / Chapter 4.2 --- Hydropathy Plot for KCNA10 --- p.97 / Chapter 4.3 --- Expression ofKCNAl0 --- p.98 / Chapter 4.3.1 --- In situ Hybridization --- p.98 / Chapter 4.3.2 --- RT-PCR & Northern Blot Analysis --- p.99 / Chapter 4.4 --- Functional Implication of KCNA10 Expression in Different Human Tissues --- p.100 / Chapter 4.4.1 --- Unique Functional Properties ofKCNAlO --- p.100 / Chapter 4.4.2 --- Role ofKCNAlO in Renal Proximal Tubule --- p.101 / Chapter 4.4.2.1 --- Functions ofK+ Channels in Kidney --- p.101 / Chapter 4.4.2.2 --- The Function ofKCNAlO --- p.104 / Chapter 4.4.3 --- Role ofKCNAl0 in Blood Vessels --- p.106 / Chapter 4.4.3.1 --- Endothelial Cells --- p.106 / Chapter 4.4.3.2 --- Smooth Muscle Cells --- p.108 / Chapter 4.4.4 --- Role ofKCNA10 in CNS --- p.109 / Chapter 4.4.5 --- Role ofKCNAl0 in Secretory Cells --- p.111 / Chapter 4.4.6 --- Role ofKCNAl0 in Lung --- p.112 / Chapter 4.5 --- Conclusion --- p.114 / Chapter Chapter5: --- Reference --- p.115

Identiferoai:union.ndltd.org:cuhk.edu.hk/oai:cuhk-dr:cuhk_324505
Date January 2003
ContributorsChan, Ho Yu., Chinese University of Hong Kong Graduate School. Division of Physiology.
Source SetsThe Chinese University of Hong Kong
LanguageEnglish, Chinese
Detected LanguageEnglish
TypeText, bibliography
Formatprint, xi, 122 leaves : ill. (some col.) ; 30 cm.
RightsUse of this resource is governed by the terms and conditions of the Creative Commons “Attribution-NonCommercial-NoDerivatives 4.0 International” License (http://creativecommons.org/licenses/by-nc-nd/4.0/)

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