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Genetics of susceptibility to tuberculosis

Convincing evidence that activated macrophages play a critical role in control of mycobacterial diseases has been clearly established from animal and in-vitro studies. Macrophages produce a variety of molecules upon appropriate stimulation, which act in concert towards eventual killing of bacteria. People with SUb-optimal macrophage activation are more susceptible to infection with intracellular pathogens. My project aims to answer two questions relating to genetic regulation of macrophage activation in tuberculosis: do macrophage genes regulate microbial-induced responses and do macrophage genes influence susceptibility to tuberculosis? A whole blood assay was used to investigate IFN-y responsiveness in healthy individuals and those who develop tuberculosis in The Gambia. Cytokine responses to lipopolysaccaride (LPS), Lipoarabinomanan (LAM) and the enhancing effect of IFN-y on these stimulants were measured. LPS induced IL-l 0 levels was higher in recovered TB cases than in controls (p=0.02). LPS and LAM induced cytokines were highly correlated (p<0.0001) similarly, levels of IL-IB and TNF were highly correlated (P<O.OOOl). Ten new polymorphisms were detected by sequencing specific regions within the promoter of IFNG and IFNGRI genes. One, a double deletion of TT in the promoter of IFNGR1, abolishes a GAS binding site at position -470 and another, a CIT transition, is close to a putative NF-kappa B binding site at position -56 in the IFNGRI gene (positions are relative to the transcription start site). These along with published polymorphisms at some macrophage candidate gene loci were genotyped. Comparisons were made to determine whether different alleles at candidate gene loci influence macrophage cytokine responses. TNFA-863 , LTA NeaL lL1RN and NRAMPl (469+14) polymorphisms were shown to influence macrophage cytokine levels significantly. TNFA-863 was associated with LPS induced TNF (P < 0.05), LTA was associated with LAM and LPS induced TNF and 1L-~ levels (p < 0.01). NRAMPI (469+14) was associated with LAM induced 1L-I0 (P<O.OI) and fL1RN was associated with LAM and LPS induced 1L-l 0 (P<0.05). Alleles 1 (G) of TNFA-308, 2 (A) of TNFA-238, 1 (T) of fL1B-511 and 2 (ddeVT) of fFNGR1 were significantly associated with TB in the panel of samples studied. For the microsatellite markers, allele 5 of fL9 (TG)n repeat in intron 4 and allele 3 of the Z DNA promoter polymorphism NRAMP 1, were significantly associated with TB. NRAMP 1 !NT 4 variant was significantly associated with both TB and LAM induced 1L-I0 secretion.

Identiferoai:union.ndltd.org:bl.uk/oai:ethos.bl.uk:340759
Date January 2000
CreatorsAwomoyi, Agnes Abiola Oluwatoyin
PublisherOpen University
Source SetsEthos UK
Detected LanguageEnglish
TypeElectronic Thesis or Dissertation
Sourcehttp://oro.open.ac.uk/58012/

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