Clustering microarray data is a helpful way of identifying genes which are biologically related. Unfortunately, when attempting to cluster microarray data, certain issues must be considered including: the uncertainty in the number of true clusters; the expression of a given gene is often a ected by the expression of other genes; and microarray data is usually high dimensional. This thesis outlines a Bayesian in nite
Gaussian mixture model which addresses the issues outlined above by: not requiring the researcher to specify the number of clusters expected, applying a non-diagonal covariance structure, and using mixtures of factor analyzers and extensions thereof to structure the covariance matrix such that it is based on a few latent variables. This
approach will be illustrated on real and simulated data.
| Identifer | oai:union.ndltd.org:LACETR/oai:collectionscanada.gc.ca:OGU.10214/5210 |
| Date | 04 January 2013 |
| Creators | Givari, Dena |
| Contributors | McNicholas, Paul |
| Source Sets | Library and Archives Canada ETDs Repository / Centre d'archives des thèses électroniques de Bibliothèque et Archives Canada |
| Language | English |
| Detected Language | English |
| Type | Thesis |
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