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Sequence context effect on base pairing modes of T·T mismatches.

He, Guoyun. / Thesis (M.Phil.)--Chinese University of Hong Kong, 2011. / Includes bibliographical references (leaves 62-69). / Abstracts in English and Chinese. / Title Page --- p.i / Abstract (English Version) --- p.iv / Abstract (Chinese Version) --- p.v / Acknowledgement --- p.vi / List of Tables --- p.ix / List of Figures --- p.x / List of Abbreviations and Symbols --- p.xii / Chapter Chapter One: --- Introduction --- p.1 / Chapter 1.1 --- Mismatches in DNA Duplex --- p.1 / Chapter 1.2 --- T.T Mismatches in DNA Duplex --- p.5 / Chapter 1.3 --- Purpose of the Work --- p.7 / Chapter 1.4 --- DNA Structure --- p.7 / Chapter 1.4.1 --- Structure and Nomenclature of Nucleotide --- p.7 / Chapter 1.4.2 --- Base Pairing --- p.8 / Chapter 1.4.3 --- Double Helical DNA Conformation --- p.9 / Chapter Chapter Two: --- Materials and Methods --- p.10 / Chapter 2.1 --- Sample Design --- p.10 / Chapter 2.2 --- Sample Preparation --- p.11 / Chapter 2.3 --- NMR Study --- p.11 / Chapter 2.3.1 --- Non-labile Proton Resonance Assignment --- p.12 / Chapter 2.3.2 --- Labile Proton Resonance Assignment in Normal Base Pairs --- p.13 / Chapter 2.3.3 --- Method to Determine T.T Pairing Mode --- p.14 / Chapter Chapter Three: --- Determination of T.T Pairing Mode --- p.16 / Chapter 3.1 --- NMR Resonance Assignment --- p.16 / Chapter 3.2 --- Result --- p.18 / Chapter 3.2.1 --- Preferential Pairing Mode: W --- p.18 / Chapter 3.2.2 --- Preferential Pairing Mode: W --- p.19 / Chapter 3.2.3 --- Exchanging and Pairing Modes --- p.20 / Chapter 3.3 --- Discussion --- p.23 / Chapter 3.3.1 --- Patterns of T.T Pairing Mode --- p.23 / Chapter 3.3.2 --- Reason for Preferential Pairing Mode --- p.24 / Chapter 3.3.3 --- Temperature Effect on T.T Pairing Mode --- p.26 / Chapter Chapter Four: --- Conclusions and Future Works --- p.29 / Chapter Appendix I: --- NOESY and WATERGATER-NOESY Assignment --- p.30 / Chapter Appendix II: --- Chemical Shifts of XTY --- p.46 / References --- p.62

Identiferoai:union.ndltd.org:cuhk.edu.hk/oai:cuhk-dr:cuhk_327519
Date January 2011
ContributorsHe, Guoyun., Chinese University of Hong Kong Graduate School. Division of Chemistry.
Source SetsThe Chinese University of Hong Kong
LanguageEnglish, Chinese
Detected LanguageEnglish
TypeText, bibliography
Formatprint, xii, 69 leaves : ill. ; 30 cm.
RightsUse of this resource is governed by the terms and conditions of the Creative Commons “Attribution-NonCommercial-NoDerivatives 4.0 International” License (http://creativecommons.org/licenses/by-nc-nd/4.0/)

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