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The Effects of Prefer Orientation on Three-Dimensional Reconstruction of T = 3 Virus Particles

Cyro-EM and three-dimensional reconstruction have become important research tools for virus structure. These techniques have benefit of fast and keep samples in native folding. Simulated prefer orientation images of DGNNV, PaV and TBSV were reconstructed by SPIDER or PurdueEM, with projection matching with. SPIDER prefers 3-fold and 5-fold view fields, and PurdueEM prefers 2-fold view fields. SPIDER could reconstruction images which have more noise than PurdueEM can successfully reconstruct. Reconstruction of RNA-cages has some
relationship with the symmetry of capsid protein. Prefer orientation, noise and RNA-cages are the factors that can effect reconstruction.

Identiferoai:union.ndltd.org:NSYSU/oai:NSYSU:etd-0620108-125652
Date20 June 2008
CreatorsChen, Chun-Hong
ContributorsChi-Hsin Hsu, Wen Zhi-Hong, Chan-Shing Lin
PublisherNSYSU
Source SetsNSYSU Electronic Thesis and Dissertation Archive
LanguageCholon
Detected LanguageEnglish
Typetext
Formatapplication/pdf
Sourcehttp://etd.lib.nsysu.edu.tw/ETD-db/ETD-search/view_etd?URN=etd-0620108-125652
Rightsnot_available, Copyright information available at source archive

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