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模擬高密度寡聚核甘酸微陣列矩陣資料及正規化方法之探討 / A Simulation Study on High Density Oligonucleotide Microarray Data With Discussion of Normalization Methods

微陣列矩陣晶片是一門現今被廣泛使用在許多領域的生物醫學研究,在本文,我們主要是對寡核甘酸微陣列矩陣晶片資料的正規化感興趣。為了比較不同的正規化方法,我們致力於模擬更接近真實寡核甘酸微陣列矩陣晶片的資料。在資料的模擬上,我們主要是根據Li和Wong的模型來進行模擬,並利用階層法來設定模型的參數。最後為了判別正規化方法的好壞,我們模擬了100組資料,並且利用四個判斷準則來做比較。模擬的結果表示,我們所提出的新方法
(LOESS to Average),一般來說都比其他的正規化方法來的好。 / Microarray technology is now widely used in many areas of biomedical research. In this thesis, we are interested in the normalization for oligonucleotide Microarray data. We aimed to simulate more realistic oligonucleotide microarry data in order to compare different normalization methods. The data simulation was based on Li and Wong's model with a hierarchical setup for parameters. In order to compare normalization methods, 100 data sets were simulated data. The performance of ten normalization methods was assessed based on four comparison criteria. Simulation results suggest that our new proposed normalization method, LOESS
to Average, is generally a better method than other normalization methods.

Identiferoai:union.ndltd.org:CHENGCHI/G0093354023
Creators吳小萍, Wu, Hsiao-Ping
Publisher國立政治大學
Source SetsNational Chengchi University Libraries
Language英文
Detected LanguageEnglish
Typetext
RightsCopyright © nccu library on behalf of the copyright holders

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