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Metallophores from selected actinobacteria for metal extraction and phytomining of strategic elements

Different aspects of interaction of metals other than iron with metallophore mixtures were elucidated. Metal chelation besides iron and greater than with pure desferrioxamine B is documented by enhanced performance of soil mineral dissolution following application of diverse metallophore mixtures. New insights from genome to product of metallophores from Gordonia rubripertincta CWB2 under different cultivation conditions and under metal stress, particularly induced by rare earth elements are given. This evaluation led to increase by a factor of 13. Structure analyses showed that the strain produces citrate and different desferrioxamines. A robust RP-HPLC-based method quantified metal complexation. Further metal immobilization methods for metallophores for metal extraction from solutions with low concentrations were established. Moreover, catechol and hydroxamate metallophores from Arthrobacter oxydans ATW2 and Kocuria rosea ATW4 demonstrate the enhancement of Ge and rare earth element bioavailability, plant growth promotion and phytoextraction potential.:CONTENTS
Abstract ..........................................................................................................1
CHAPTER 1 Introduction ......................................................................................5
CHAPTER 2 Mobilization of trace elements in soil extracts by bacterial siderophores in dependence of the pH-value..................................31
CHAPTER 3 Cultivation dependent formation of siderophores by Gordonia rubripertincta CWB2........................................................................41
CHAPTER 4 Data on metal-chelating, -immobilization and biosorption properties by Gordonia rubripertincta CWB2 in dependency on rare earth adaptation.......................................................................................67
CHAPTER 5 Analysis of desferrioxamine-like siderophores and their capability to selectively bind metals and metalloids: development of a robust analytical RP-HPLC method. ..........................................................97
CHAPTER 6 Secondary metabolites released by the rhizosphere bacteria Arthrobacter oxydans and Kocuria rosea enhance plant availability and soil–plant transfer of germanium (Ge) and rare earth elements (REEs) .........................................................................................120
CHAPTER 7 Conclusion remarks and further perspectives ...............................154
References .......................................................................................................162
Acknowledgement .........................................................................................185
Curriculum Vitae ..........................................................................................187
List of publications ..........................................................................................189
List of oral and poster presentations ..........................................................190
List of proceedings ..........................................................................................191 / En este trabajo se han dilucidado diferentes aspectos de la interacción de los metales con las mezclas de metalóforos desde distintos ángulos. La quelación de metales por debajo del hierro se pone de manifiesto en la mejora del rendimiento de la disolución de los minerales del suelo debido a la aplicación de diversas mezclas de metanóforos en comparación con la deferoxamina B pura. Se ofrecen nuevos conocimientos desde el genoma hasta el producto de los metanóforos de Gordonia rubripertincta CWB2 en diferentes condiciones de cultivo y bajo estrés por metales, especialmente inducido por elementos de tierras raras. Esta evaluación condujo a una sobreproducción de un factor de 13. El análisis estructural muestra que la cepa produce citrato y diferentes desferrioxaminas. Un método robusto basado en RP-HPLC cuantificó la complejación de metales. Se establecieron otros métodos de inmovilización de metales para la extracción de metales a partir de soluciones poco concentradas. Además, los metalóforos de catecol e hidroxamato de Arthrobacter oxydans ATW2 y Kocuria rosea ATW4 demuestran la mejora de la biodisponibilidad de GE y REE, la promoción del crecimiento vegetal y el potencial de fitoextracción.:CONTENTS
Abstract ..........................................................................................................1
CHAPTER 1 Introduction ......................................................................................5
CHAPTER 2 Mobilization of trace elements in soil extracts by bacterial siderophores in dependence of the pH-value..................................31
CHAPTER 3 Cultivation dependent formation of siderophores by Gordonia rubripertincta CWB2........................................................................41
CHAPTER 4 Data on metal-chelating, -immobilization and biosorption properties by Gordonia rubripertincta CWB2 in dependency on rare earth adaptation.......................................................................................67
CHAPTER 5 Analysis of desferrioxamine-like siderophores and their capability to selectively bind metals and metalloids: development of a robust analytical RP-HPLC method. ..........................................................97
CHAPTER 6 Secondary metabolites released by the rhizosphere bacteria Arthrobacter oxydans and Kocuria rosea enhance plant availability and soil–plant transfer of germanium (Ge) and rare earth elements (REEs) .........................................................................................120
CHAPTER 7 Conclusion remarks and further perspectives ...............................154
References .......................................................................................................162
Acknowledgement .........................................................................................185
Curriculum Vitae ..........................................................................................187
List of publications ..........................................................................................189
List of oral and poster presentations ..........................................................190
List of proceedings ..........................................................................................191 / Es wurden verschiedene Aspekte der Wechselwirkung von anderen Metallen als Eisen mit Metallophormischungen untersucht. Die Chelatbildung mit anderen Metallen als Eisen, die größer ist als bei reinem Desferrioxamin B, wird durch eine verbesserte Leistung bei der Auflösung von Bodenmineralien nach Anwendung verschiedener Metallophormischungen dokumentiert. Es werden neue Erkenntnisse vom Genom bis zum Produkt von Metallophoren aus Gordonia rubripertincta CWB2 unter verschiedenen Anbaubedingungen und unter Metallstress, insbesondere induziert durch Seltene Erden, gegeben. Diese Auswertung führte zu einer Steigerung um den Faktor 13. Strukturanalysen zeigten, dass der Stamm Citrat und verschiedene Desferrioxamine produziert. Eine robuste RP-HPLC-basierte Methode quantifizierte die Metallkomplexierung. Weitere Methoden zur Metallimmobilisierung von Metallophoren für die Metallextraktion aus Lösungen mit niedrigen Konzentrationen wurden etabliert. Darüber hinaus zeigen Catechol- und Hydroxamat-Metallophore aus Arthrobacter oxydans ATW2 und Kocuria rosea ATW4 die Verbesserung der Bioverfügbarkeit von Ge und Seltenen Erden, die Förderung des Pflanzenwachstums und das Phytoextraktionspotenzial.:CONTENTS
Abstract ..........................................................................................................1
CHAPTER 1 Introduction ......................................................................................5
CHAPTER 2 Mobilization of trace elements in soil extracts by bacterial siderophores in dependence of the pH-value..................................31
CHAPTER 3 Cultivation dependent formation of siderophores by Gordonia rubripertincta CWB2........................................................................41
CHAPTER 4 Data on metal-chelating, -immobilization and biosorption properties by Gordonia rubripertincta CWB2 in dependency on rare earth adaptation.......................................................................................67
CHAPTER 5 Analysis of desferrioxamine-like siderophores and their capability to selectively bind metals and metalloids: development of a robust analytical RP-HPLC method. ..........................................................97
CHAPTER 6 Secondary metabolites released by the rhizosphere bacteria Arthrobacter oxydans and Kocuria rosea enhance plant availability and soil–plant transfer of germanium (Ge) and rare earth elements (REEs) .........................................................................................120
CHAPTER 7 Conclusion remarks and further perspectives ...............................154
References .......................................................................................................162
Acknowledgement .........................................................................................185
Curriculum Vitae ..........................................................................................187
List of publications ..........................................................................................189
List of oral and poster presentations ..........................................................190
List of proceedings ..........................................................................................191

Identiferoai:union.ndltd.org:DRESDEN/oai:qucosa:de:qucosa:82369
Date12 December 2022
CreatorsSchwabe, Ringo
ContributorsSchlömann, Michael, Levicán, Gloria, Tischler, Dirk, Ortiz, Claudia, Technische Universität Bergakademie Freiberg, Universidad de Santiago de Chile
Source SetsHochschulschriftenserver (HSSS) der SLUB Dresden
LanguageEnglish
Detected LanguageEnglish
Typeinfo:eu-repo/semantics/publishedVersion, doc-type:doctoralThesis, info:eu-repo/semantics/doctoralThesis, doc-type:Text
Rightsinfo:eu-repo/semantics/openAccess
Relation10.1016/j.micres.2020.126481, 10.1016/j.dib.2020.105739, 10.1016/j.resmic.2018.08.002, 10.1016/j.chemosphere.2021.131466

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