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Genetic and Methylation Analysis of CTNNB1 in Benign and Malignant Melanocytic Lesions

Melanocytic neoplasms have been genetically characterized in detail during the last decade.
Recurrent CTNNB1 exon 3 mutations have been recognized in the distinct group of melanocytic
tumors showing deep penetrating nevus-like morphology. In addition, they have been identified
in 1–2% of advanced melanoma. Performing a detailed genetic analysis of difficult-to-classify nevi
and melanomas with CTNNB1 mutations, we found that benign tumors (nevi) show characteristic morphological, genetic and epigenetic traits, which distinguish them from other nevi and
melanoma. Malignant CTNNB1-mutant tumors (melanomas) demonstrated a different genetic profile,
instead grouping clearly with other non-CTNNB1 melanomas in methylation assays. To further
evaluate the role of CTNNB1 mutations in melanoma, we assessed a large cohort of clinically sequenced melanomas, identifying 38 tumors with CTNNB1 exon 3 mutations, including recurrent S45
(n = 13, 34%), G34 (n = 5, 13%), and S27 (n = 5, 13%) mutations. Locations and histological subtype of
CTNNB1-mutated melanoma varied; none were reported as showing deep penetrating nevus-like
morphology. The most frequent concurrent activating mutations were BRAF V600 (n = 21, 55%) and
NRAS Q61 (n = 13, 34%). In our cohort, four of seven (58%) and one of nine (11%) patients treated with targeted therapy (BRAF and MEK Inhibitors) or immune-checkpoint therapy, respectively, showed
disease control (partial response or stable disease). In summary, CTNNB1 mutations are associated
with a unique melanocytic tumor type in benign tumors (nevi), which can be applied in a diagnostic
setting. In advanced disease, no clear characteristics distinguishing CTNNB1-mutant from other
melanomas were observed; however, studies of larger, optimally prospective, cohorts are warranted.

Identiferoai:union.ndltd.org:DRESDEN/oai:qucosa:de:qucosa:88454
Date05 December 2023
CreatorsZaremba, Anne, Jansen, Philipp, Murali, Rajmohan, Mayakonda, Anand, Riedel, Anna, Krahl, Dieter, Burkhardt, Hans, John, Stefan, Géraud, Cyrill, Philip, Manuel, Kretz, Julia, Möller, Inga, Stadtler, Nadine, Sucker, Antje, Paschen, Annette, Ugurel, Selma, Zimmer, Lisa, Livingstone, Elisabeth, Horn, Susanne, Plass, Christoph, Schadendorf, Dirk, Hadaschik, Eva, Lutsik, Pavlo, Griewank, Klaus
PublisherMDPI
Source SetsHochschulschriftenserver (HSSS) der SLUB Dresden
LanguageEnglish
Detected LanguageEnglish
Typeinfo:eu-repo/semantics/publishedVersion, doc-type:article, info:eu-repo/semantics/article, doc-type:Text
Rightsinfo:eu-repo/semantics/openAccess
Relation2072-6694, 10.3390/cancers14174066

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