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The Binary String-to-String Correction Problem

String-to-String Correction is the process of transforming some mutable string M into an exact copy of some other string (the target string T), using a shortest sequence of well-defined edit operations. The formal STRING-TO-STRING CORRECTION problem asks for the optimal solution using just two operations: symbol deletion, and swap of adjacent symbols. String correction problems using only swaps and deletions are computationally interesting; in his paper On the Complexity of the Extended String-to-String Correction Problem (1975), Robert Wagner proved that the String-to-String Correction problem under swap and deletion operations only is NP-complete for unbounded alphabets.
In this thesis, we present the first careful examination of the binary-alphabet case, which we call Binary String-to-String Correction (BSSC). We present several special cases of BSSC for which an optimal solution can be found in polynomial time; in particular, the case where T and M have an equal number of occurrences of a given symbol has a polynomial-time solution. As well, we demonstrate and prove several properties of BSSC, some of which do not necessarily hold in the case of String-to-String Correction. For instance: that the order of operations is irrelevant; that symbols in the mutable string, if swapped, will only ever swap in one direction; that the length of the Longest Common Subsequence (LCS) of the two strings is monotone nondecreasing during the execution of an optimal solution; and that there exists no correlation between the effect of a swap or delete operation on LCS, and the optimality of that operation. About a dozen other results that are applicable to Binary String-to-String Correction will also be presented. / Graduate / 0984 / 0715 / tspreen@gmail.com

Identiferoai:union.ndltd.org:uvic.ca/oai:dspace.library.uvic.ca:1828/4884
Date30 August 2013
CreatorsSpreen, Thomas D.
ContributorsRuskey, Frank, Stege, Ulrike
Source SetsUniversity of Victoria
LanguageEnglish, English
Detected LanguageEnglish
TypeThesis
RightsAvailable to the World Wide Web

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