• Refine Query
  • Source
  • Publication year
  • to
  • Language
  • No language data
  • Tagged with
  • 1
  • 1
  • 1
  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Identification of proteins interacting with the polymerase (L) protein of rinderpest virus

Sleeman, Katrina January 2003 (has links)
Rinderpest virus (RPV) is a morbillivirus which causes a highly contagious disease affecting members of the order Artiodactyla. The viral L protein is the catalytic subunit of the RNA-dependent RNA polymerase, but requires the P protein for activity. In previous studies it was found that, in addition to a direct L-P interaction, both the C and V non-structural proteins bind to L. The L proteins of morbilliviruses consist of three long highly conserved domains separated by short unconserved sequences. The interaction of P, C and V with these three domains was studied. Using co-immunoprecipitation, it was shown that P interacts with the first domain, whilst C and V were each shown to interact with the central domain. Further mutational analysis using the yeast two-hybrid system (Y2HS), showed that the P binding site lies in the amino-proximal domain of L, between amino acids 1 and 233, which fits with the co-immunoprecipitation data. However, the Y2HS suggested that the binding site for C and V includes a region between amino acids 1 and 363 of L, i.e. within the first domain. These data indicate (i) that the P binding site is distinct from that ofC and V, and (ii) that the C and V binding site(s) may be complex. To search for host cell proteins with which L interacts, a library screen was performed using the Y2HS and a porcine macrophage cDNA library. Three host cell proteins were recovered from the library screen as putative L interactors. The interaction with one of these, striatin, was confirmed by co-immunoprecipitation, and co-localisation of the two proteins was observed by confocal microscopy. The L sequence with which striatin interacts was investigated. Like the C and V proteins, striatin was shown to interact with the second conserved domain of L by co-immunoprecipitation and Y2HS data indicated that a possible second binding site for striatin includes a region of L sequence between amino acids 1 and 363.

Page generated in 0.0141 seconds