Thesis (MTech (Conservation and Marine Sciences))--Cape Peninsula University of Technology, 2016. / Invasive alien plant species pose a major threat to global biodiversity by displacing native vegetation and transforming habitats. In South Africa, invasive alien plants have become a major component of most habitats. River systems are particularly affected owing to their dynamic nature and to anthropogenic activities. This has resulted in fynbos riparian scrub vegetation being replaced mainly by Acacia and Eucalyptus species, with serious ecological and economic impacts. The presence of alien trees along river banks leads to a reduction in native plant species richness and their high water consumption adds on to the existing water challenges in an already dry country. However, with regards to native fauna, it largely remains unknown both at small or large spatial scale, whether alien trees provide additional habitat which increases biodiversity, or if their presence leads to a reduction of native biodiversity. Impacts on water supply have led to large-scale clearing of invasive alien trees from riparian zones by the government through the Working for Water (WfW) programme. Monitoring and evaluation studies carried out after clearing are not well-rounded and mostly focus on vegetation response to clearing. Although some of these studies have reported successful restoration through passive methods, ecosystem recovery remains partial. There is evidently a lack of information regarding the response of animal communities to invasive alien plant clearing. Therefore, the main objective of this thesis was to investigate bird assemblage response to alien tree invasion and clearing. As a study system, I used the riparian area of the Berg River within the fynbos biome of the Cape Floristic Region, South Africa. The area historically consisted of renosterveld vegetation characterised by a matrix of shrubs and a high diversity of geophytes but relatively poor avifaunal diversity. This area is heavily affected by invasive alien trees and shrubs including Eucalyptus camaldulensis. I employed bird assemblages as an indicator, and used fixed-point bird counts to compare bird species richness and bird abundance between invaded and near-pristine habitats. Invasion by E. camaldulensis significantly reduced bird species richness and abundance. In particular, nectarivores and frugivores, which play important mutualistic roles in the fynbos, were reduced and unexpectedly; there were fewer raptors in invaded areas. I proceeded to carry out a space for time substitution, comparing plant and bird assemblages in invaded sites, near-pristine sites and in sites cleared in 2005, 2007, 2008 and 2014. A general increase in bird species richness and bird abundance with time since clearing exists with bird assemblages in cleared sites being similar to those in near-pristine sites. However, bird assemblages in cleared sites have not yet fully recovered a decade after clearing and four native plant species are still absent. In the third part of my thesis I assessed the impacts of invasive alien plants on bird assemblages at a larger spatial scale. The different responses shown by bird assemblages to invasive alien plant cover depended on the intensity of invasion, spatial scale and other land uses. From a bird’s eye view, this study supports the current clearing by WfW given the significant negative effects of invasive alien plants on bird diversity both at plot and large spatial scales. However, passive restoration is unsuccessful in restoring the full complement of plants and birds, therefore, active restoration should be considered. To limit the cost, I suggest a focused restoration approach of selected keystone tree species which can assist to establish a functional native ecosystem.

The problems posed by alien invasive plants to our environment and the need for clearing and control has been highlighted by the Working for Water (WFW) programme. Alien plant control requires careful planning, including budgeting. To date, costing and budgeting in alien plant control has largely been a combination of experience on the part of weed 'experts', coupled with much guess work. Weed controllers have through experience calculated the amount of time (or the work rate), recorded as labour days, required for different control actions of different weed habits. These work rates are for weed clearance under ideal conditions and do not take into account the effect of factors such as gradient, access and distance to the weed infestation. Factors affecting the work rate has been researched and modelled by researchers in both alien plant control and the timber industry. While the existing work rate model is useful in its present theoretical state, the model may be improved upon to make it more practical and applicable to the varying conditions of different areas. This research built on existing theoretical research on alien control work rates, and concentrated on two main areas: the adaption and incorporation of the existing research on work rates into a Geographical Information System (GIS), and the creation and demonstration of a Spatial Decision Support System (SDSS) for the management of alien plant control. The eMpofana river in the KwaZulu-Natal midlands was selected as the study area, as there was an existing alien plant control programme. Initially all factors, such as slope, access to weed infestations, terrain and penetrability of infestations, affecting the work rate in the research area were identified. An existing work rate model was then modified to account for the conditions of the research area. Regression analysis was used to derive the relationship between the various factors affecting work rate, creating a work rate model applicable to the study area. Using the results of the regression analysis together with work rate figures adapted from an existing alien plant control programme, a SDSS for alien plant control along the eMpofana River was created. The use of the work rate model and the SDSS in the development of weed control programmes was demonstrated by examining four different management approaches, each having a different management objective . The SDSS provides a spatial component to weed control planning and costing that has thus far not existed. What this research has achieved is the advancement of an alien control work rate model from a theoretical to a more realistic costing process. While some factors affecting work rate may not have been accounted for, the model does address the present inaccuracies in labour costing, and ultimately alien plant control costing. The research has highlighted the disadvantages of GIS in terms of affordability and expertise. The model has wider uses than the eMpofana River, and is the ground work for the further development of a user friendly model applicable throughout South Africa. More effective project budgeting will decrease the likelihood of project failure and this will directly benefit long-term weed control efforts. / Thesis (M.Sc.)-University of Natal, Pietermaritzburg, 2000.

South Africa has a long history of problems with invasive alien species. In an assessment of alien invading plants and water resources in South Africa Versveld et al. (1998) estimated that Invasive Alien Plants (IAPs) in South Africa covered an area equivalent to the size of KwaZulu-Natal. However this area of invasion was primarily concentrated along the river courses of South Africa as alien invasions are arguably a riparian problem (Versveld et al., 1998). In a 1998 assessment of the distribution of IAPs in South Africa Versveld et al. (1998) found a total invasion extent of 8% for South Africa (including Lesotho), while KwaZulu-Natal had a higher total extent of invasion at 9.75%. However the authors noted the limitations of the IAP mapping assessment and stated that from personal observations and observers’ comments the area invaded by IAPs may be as much as 2-3 times greater than the 9.75% value obtained for KwaZulu-Natal. South Africa’s most widespread invasive alien tree (Dye and Jarmain, 2004), Acacia mearnsii (black wattle), is ubiquitous throughout KwaZulu-Natal, and invades most severely where water is plentiful, such as along watercourses and road verges. However following dispersal along rivers, A. mearnsii spreads into adjacent terrestrial habitats (Richardson and Kluge, 2008) including indigenous grassland and forest. A. mearnsii was introduced to South Africa in the middle 19th century to provide tanbark, woodchips, construction poles and firewood, and its introduction spread rapidly across KwaZulu-Natal through farmers and foresters (Henderson, 2001; WESSA, 2008). River and riparian zone rehabilitation is becoming accepted as having an essential role to play in the long term solution of water resource quality and supply problems and environmental health as a whole. As a result the impact of IAP invasions on water resources, ecological habitats and the delivery of ecosystem goods and services has undergone much scientific investigation (van Wilgen et al., 2008). Numerous studies have shown that, under most circumstances, removal of IAPs results in a general increase in streamflow and returns a stream to a more natural seasonal flow regime. However, scientific studies on the influences of woody IAPs on the hydrogeomorphology of riparian areas, and the resultant effects on stream hydrology and ecology, have undergone little scientific investigation in the South African context. Hydrogeomorphology studies the linkages of surface and subsurface water, and hydrological processes with landforms and geomorphic processes in temporal and spatial dimensions. As a result the discipline is well applied to the study of the interaction of, and interdisciplinary impacts of IAPs on riparian areas. Macdonald (2004:22) stated that there is a need to “investigate the interaction of IAPs with other aspects of water quality, for example soil erosion rates, including river channel and bank erosion.” In the early 1990s, after a study assessing the potential impact of IAPs on the geomorphology of river channels in South Africa, Rowntree (1991) stressed that further research on the influence of IAPs on stream geomorphology is required to guide truly effective riparian zone management. Since this study, little scientific work has been undertaken on this topic in the South African context. The literature review portion of this dissertation reviews the findings of various researchers as to how IAPs physically influence riparian habitats, specifically with reference to the role of IAPs in degrading riparian and streambank landscapes to an extent that streambank stability and stream channel form is adversely affected. This topic is introduced by illustrating the many functions that riparian zones can perform and some of the possible consequences of a loss of riparian habitat integrity. Worldwide awareness of the functions and values of riparian systems has led many countries to perform inventories of threatened and valuable riparian areas. A database of stream habitat integrity is useful for environmental impact assessments, development planning and resource inventories. Thus a multitude of stream survey and aquatic health sampling techniques and methodologies have been developed, some of which could be applied to assessing the influence of IAPs on riparian zones. 1.1 Research Aims and Objectives This dissertation forms a research study based on field research centred around field methods and tools developed after a review of relevant literature. The key aims of this research study are to; · refine an international river habitat survey method for application within South Africa, and · develop a test case to implement the developed method in analysing the impacts of IAPs on stream hydrogeomorphology in small headwater streams of KwaZulu-Natal, South Africa. These aims are achieved through the following objectives; · investigate the current body of knowledge covering the impact of woody IAP invasions on streambank stability and channel form, · review available stream survey methods and develop a stream survey methodology which can be applied to investigate the relationships between woody IAP invasions and streambank stability and form within headwater streams of KwaZulu-Natal, · investigate the relationships illustrated by the data after applying the developed stream survey tools and fieldwork methodology, and · discuss any shortfalls of the developed tools and methods, and suggest future needs. The hypothesis of the study contends that, within the focus of this study, invasion of headwater streams by woody IAPs can result in; · increased channel incision and bank steepening, and · an increase in streambank instability. 1.2 Document Structure Chapters 2 to 4 form a review of current literature to establish a base of understanding of the implications, processes and components involved in the invasion of riparian zones by Invasive Alien Plants. In Chapter 5 the approaches to stream surveying are assessed and selected methods of stream survey seen as applicable to this study are reviewed. Based on these findings, a method of stream survey for application in this study is developed and described in Chapter 6 following a description of the fieldwork sites and methodology. Chapter 7 provides an extensive analysis and exploration of the results of the various components of the fieldwork, which are then discussed in Chapter 8. Chapter 9 outlines final conclusions, analysis of the applicability of the findings, and suggestions with regards to future research needs. / Thesis (M.Sc.)-University of KwaZulu-Natal, Pietermaritzburg, 2010.

Widespread anthropogenic invasions have prompted concerns that naturalized organisms could threaten biodiversity. In particular, invasive weeds can negatively affect native biota through a variety of means, including disrupting mutualisms. This thesis was designed to observe and test dispersal mutualisms in a native forest during autumn when the majority of plant species are fruiting. In this thesis I examined whether the invasive plant barberry (Berberis glaucocarpa) was influencing the behaviour of a native frugivore bellbird (Anthornis melanura) and a range of dispersal related services in a native forest, Kowhai Bush near Kaikoura. To test these 18 banded bellbirds were followed through autumn 2011. These observe bellbirds were split between control and test bird. Barberry fruit was removed from the test bird territories. I recorded whether bellbirds changed their territory sizes, foraging and daily behaviours. During 52 hours of observations, bellbirds were never observed feeding on barberry fruit. No significant changes to bellbird behaviour or territories were observed after the removal of barberry fruit. Bellbird diet overall was dominated by invertebrates (83% of foraging observations), with smaller contributions from fruit (16%, nearly all on Coprosma robusta), nectar and honeydew. Since bellbirds did not eat barberry fruit, removal of this weed is unlikely to negatively affect bellbirds during autumn. Which other bird species were dispersing barberry was recorded. I recorded 242 hours of videotape footage on 24 fruiting plants. A total of 101 foraging events were recorded of 4 different bird species: silvereyes (Zosterops lateralis) 42 visits, blackbirds (Turdus merula) 27 visits, song thrush (Turdus philomelos) 29, and starlings (Sturnus vulgaris) 3 visits. The species differed in the mean length of time they spent in plants, so the overall contribution to barberry fruit removal was 32.6% silvereyes, 24.3% blackbirds, 42.9% song thrush and 0.1% starlings. To find out the relative contribution of exotic and native birds to dispersal of fruits in Kowhai Bush, I mist-netted 221 birds of 10 species and identified any seeds in the 183 faeces they deposited. A total of 21 plant species were observed fruiting in Kowhai Bush during this time. A total of 11 different plant species were identified from 1092 seeds. Birds were further observed feeding on 3 other plant species which were not observed in faecal samples. This left 7 plants with unobserved dispersal vectors. There were likely four main dispersers, bellbirds, silvereyes, song thrush and blackbirds and five minor, brown creeper (Mohoua novaeseelandiae), tui (Prosthemadera novaeseelandiae), fantails (Rhipidura fuliginosa), dunnock (Prunella modularis) and starlings. However there was considerable variability between these bird species dispersal abilities. Introduced birds’ song thrush and blackbirds were observed dispersing naturalized plant seeds at higher than expected rates in comparison to native frugivores bellbirds and silvereyes. I also measured the gape sizes on mist netted birds and on samples of fruit from Kowhai Bush. Both silvereyes and bellbirds were found to be eating fruit larger than their gape, but despite this two native (Hedycarya arborea and Ripogonum scandens) and three exotic plants (Vitis vinifera, Taxus baccata and Crataegus monogyna) had large fruit that were probably mainly dispersed by song thrush and blackbirds. Hence, introduced birds were important seed dispersers for large fleshy fruited seeds in Kowhai Bush. Demonstrating that interactions among native and exotic flesh fruited plants and frugivores is important within forest communities.

Thesis (Ph. D.)--University of Hawaii at Manoa, 2004. / Includes bibliographical references. / Also available by subscription via World Wide Web / xiv, 177 leaves, bound ill., maps 29 cm

<p>Arundo donax is an invasive species that mostly impacts on sensitive riparian ecosystems. Arundo is also invasive in South Africa, though less is known about its ecology, biology, and impacts. Since California and the Western Cape of South AFrica have similar Mediterranean-type climates, we could assume that the impacts of Arundo on ecosystems in California are likely to be similar in the Western Cape, and that control methods used could be extrapolated for use in South Africa. This thesis attempted to determine what impact Arundo has on biodiversity at the community-ecosystem level.</p>

Models that are used for predicting species' potential distributions are important tools that have found applications in a number of areas of applied ecology. The majority of these models can be classified as correlative, as they rely on strong, often indirect, links between species distribution records and environmental predictor variables to make predictions. Correlative models are an alternative to more complex mechanistic models that attempt to simulate the mechanisms considered to underlie the observed correlations with environmental attributes. This study explores the influence of the type and quality of the data used to calibrate correlative models. In terms of data type, the most popular techniques in use are group discrimination techniques, those that use both presence and absence locality data to make predictions. However, for many organisms absence data are either not available or are considered to be unreliable. As the available range of profile techniques (those using presence only data) appeared to be limited, new profile techniques were investigated and evaluated. A new profile modelling technique based on fuzzy classification (the Fuzzy Envelope Model) was developed and implemented. A second profile technique based on Principal Components Analysis was implemented and evaluated. Based on quantitative model evaluation tests, both of these techniques performed well and show considerable promise. In terms of data quality, the effects on model performance of false absence records, the number of locality records (sample size) and the proportion of localities representing species presence (prevalence) in samples were investigated for logistic regression distribution models. Sample size and prevalence both had a significant effect on model performance. False absence records had a significant influence on model performance, which was affected by sample size. A quantitative comparison of the performance of selected profile models and group discrimination modelling techniques suggests that different techniques may be more successful for predicting distributions for particular species or types of organism than others. The results also suggest that several different model design! sample size combinations are capable of making predictions that will on average not differ significantly in performance for a particular species. A further quantitative comparison among modelling techniques suggests that correlative techniques can perform as well as simple mechanistic techniques for predicting potential distributions.

Globalization has seen an unprecedented dispersal of exotic and alien species worldwide resulting in worldwide homogenization and sometimes extinction of indigenous or endemic taxa. When an exotic species becomes established in a new habitat the invasive organisms are capable of having an impact on indigenous community dynamics and the overall structure and function of ecosystems. Furthermore, the impact of invasion is determined by the geographical range, abundance and the per-capita or per-biomass effect of the invader. However, the success of the introduced organisms is reliant on their ability to acclimate to the physiochemical conditions of the newly invaded environment.Freshwater ecosystems are especially vulnerable to invasions because there are numerous potential routes of introduction including intentional pathways such as stocking, and unintentional pathways such as the release of ballast water and aquarium releases. Efforts to limit the introduction of invasive species or to manage established exotic populations are often hindered by insufficient understanding of the natural history of problematic species. Relatively little is known regarding the physiological tolerances of many taxa. Knowledge about specific species ecophysiological constraints allows for the prediction of future patterns of invasion more accurately, including where an introduced organism would probably survive, thrive and disperse. Furthermore, data on the physiological tolerances of an introduced exotic organism may provide data necessary for effective management and control. This studyinvestigated three invasive species in the Nseleni River system in a protected area in KwaZulu-Natal. The species studied were, Tarebia granifera (Quilted melania – Lamarck, 1822), Pterygoplichthys disjunctivus (Suckermouth armoured catfish - Weber, 1991) and Eichhornia crassipes (water hyacinth – (Martius) Solms-Laubach,). The Nseleni River flows into Lake Nsezi which is responsible for providing potable water to the surrounding towns and industry, as well as the surrounding rural communities. The Enseleni Nature reserve has become the centre for biodiversity dispersal in the immediate area, due to the change in landscape surrounding the protected area.An important step in developing alien invasive species management strategies in protected areas is determining their extent and invasive traits. Tarebia granifera is a prosobranch gastropod originally from South-East Asia that has become invasive in several countries around the world including South Africa. Snail populations were sampled at nine sites throughout the Nseleni/Mposa river system every six weeks over a twelve month period. The snail was abundant throughout the system, especially in shallow waters of less than 1m in depth.The first positive identification the loricariid catfish Pterygoplichthys disjunctivus for the Nseleni River was in 2006. The original introduction is believed to have been via the aquarium trade. The aim of the study was to assess the usefulness of the unified framework with regard to management of fish invasions by assessing the invasion stage of the loricariid population and identifying appropriate management actions using the Blackburn et al. (2011) framework. The fish were sampled at nine different sites and three different depths over a period of twelve months, as well as when two ichthyological surveys were carried out on the Nseleni River system. This invasive fish has been located throughout the system and both male and female fish were collected. The smallest fish sampled was a fingerling of a day or two old and the smallest pregnant female was a mere 270mm TL. This is a clear indication that this fish is breeding in the river system.Although T. granifera and P. disjunctivus were abundant in the Nseleni/Mposa river system, it was not clear what their role in the system was, and in particular if they were competing with any of the indigenous species. Therefore, isotope samples were collected from numerous taxa over a two week period, with the exception of Pterygoplichthys disjunctivus samples, which were collected over 12 months. The δ13C and δ15N signatures of all samples were determined. The niche overlap between the invasive and indigenous snails was effectively zero (1.02E-13%), indicating no shared food resources. The medium ranges of dNRb (7.14) and dCRb (9.07) for the invasive fish indicate that it utilizes a wider range of food resources and trophic levels than the majority of indigenous fish. A medium CDb value (2.34) for the invasive fish species, P. disjunctivus, describes medium trophic diversity, with three indigenous species possessing higher diversity and three possessing lower diversity. Furtherresults indicated that there was no direct dietary competition between P. disjunctivus and indigenous species. Eichhornia crassipes was first recorded on the Nseleni River in 1978, and has been shown to have a significant negative impact on the biodiversity of the Nseleni/Mposa River system and therefore required a control intervention. Although biological control using the two weevil species Neochetina eichhornia (Warner) and N. bruchi (Hustache) has been credited with affecting a good level of control, the lack of a manipulated post-release evaluation experiments has undermined this statement. Five experimental plots of water hyacinth of 20m2 were sprayed with an insecticide to control weevils. After ten months the plants in the sprayed plots were significantly bigger and heavier than those in the control plots that had natural populations of the biological control agents. This study has shown unequivocally that biological control has contributed significantly to the control of water hyacinth on the Nseleni/Mposa River system.The management plan for the Enseleni Nature Reserve identifies the need to control invasive and/or exotic organisms within the boundary of the protected area. In addition, set guidelines have been implemented on how to control these organisms, so that indigenous organisms are least affected. Lack of control of exotic organisms can have serious consequences for indigenous species. It is therefore of utmost importance that the population dynamics of the invading organism be understood, what the potential impact could be and how to control them. Furthermore, it has also acknowledged the threat of possible exotic species invasions from outside of the protected area that might result in threats to the protected area and that these must be investigated, researched and managed.This thesis has identified Tarebia granifera, Pterygoplichthys disjunctivus and Eichhornia crassipes as being a threat to indigenous biodiversity within the protected area, as well as in adjacent areas to the protected area. The thesis will therefore investigate the hypothesis that both Tarebia granifera and Pterygoplichthys disjunctivus are having a direct negative effect on available food resources for indigenous species of organisms. In addition, this thesis will investigate if theNeochetina species that have previously been introduced onto E. crassipes are having any negative effect on this invasive alien aquatic plant.

Analysis of the flora of the Pondoland Centre of Endemism (PCE) recorded 2253 species in the combined checklist of four sites (Port St. Johns, Mkambati, Umtamvuna and Oribi Gorge). Of these 1 % species are endemic to Pondoland, representing 8.7% of the Species, 15% of the genera and 26% of the families of the combined flora. Forty-four percent ofthe combined flora was only recorded from one locality (between 17% and 26% of each flora) and only 12% of the flora was present in all four localities. Of the endemics only sixteen (8%) occurred in all four sites thus each site had its own complement of unique endemics and 21 % endemics were not recorded from any of the four sites. At species level the floras of Mkambati and Umtamvuna were the most similar, followed by that of Umtamvuna and Oribi Gorge. Port St Johns had the least in common with any of the othersites, but more in common with non-neighbours Umtamvuna and Oribi Gorge than with its nearest neighbour Mkambati. Mkambati and Umtamvuna had the largest proportion of PCE endemics and Port St Johns had the lowest. The four sites are quite similar at family level, sharing thirteen families in the top ten family list between them, but much less similar at generic level.

Ammophila arenaria (L.) Link is a European sand binding plant which was introduced to South Africa in the 1870's for the purpose of dune stabilisation. Because of its known invasiveness along the west coast of North America, and the problems South African ecosystems experience with alien invader plants, it was deemed necessary to study the biology and ecology of this species in South Africa. The aim of this thesis is to establish the potential invasiveness of A. arenaria on Cape coastal dunes and assess whether its use for dune stabilisation is still justifiable. A. arenaria occurs nowadays between the Langebaan area on the west coast and Gonubie in the Eastern Cape. Although widespread, the grass appears to occur only in areas where it has been planted. Its unaided spread may be prevented by adverse climatic conditions. Studies on the community biology of South African A. arenaria communities as compared to indigenous dune plant communities and natural A. arenaria communities in Europe cannot confirm the aggressive behaviour that A. arenaria shows in California and Oregon. In South Africa, A. arenaria does not exert strong floristic control over other species or outcompete and replace them, neither does it alter the topography of South African beaches and dunes. It forms weaker species associations and tends to develop communities of little species variability along the coast, thereby proving its alienness in South Africa, but this does not imply its invasiveness. Studies on succession of A. arenaria stabilisation areas show that monospecific A. arenaria plantings can be succeeded by a species-rich indigenous dune scrub or dune fynbos within a few decades. Plant-parasitic nematodes have been recorded, which may play an important role in the succession of A. arenaria stands in South Africa as was observed in Europe. Monitoring of A. arenaria communities and indigenous communities over nearly three years shows that A. arenaria is not spreading and replacing indigenous plants but in fact rather being replaced by the latter. A. arenaria profits from a superior sand burial tolerance but is affected by adverse climatic factors, mostly the lack of rainfall and strong radiation. In comparison to the indigenous dune grasses Thinopyrum distichum and Ehrharta villosa, it does not show any superior demographic traits such as an unusually high growth rate or large aboveground biomass production. Although A. arenaria produces viable seed in South Africa, the indigenous grasses show better germination and seedling establishment in the field. This study indicates that A. arenaria is not invasive in South Africa, nor likely to become an invader species in the near future. However, more research is required to confirm these results and more caution recommended regarding the further use of this alien grass for dune stabilisation.