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  • About
  • The Global ETD Search service is a free service for researchers to find electronic theses and dissertations. This service is provided by the Networked Digital Library of Theses and Dissertations.
    Our metadata is collected from universities around the world. If you manage a university/consortium/country archive and want to be added, details can be found on the NDLTD website.
1

Deep Learning Based Image Segmentation for Tumor Cell Death Characterization

Forsberg, Elise, Resare, Alexander January 2024 (has links)
This report presents a deep learning based approach for segmenting and characterizing tumor cell deaths using images provided by the Önfelt lab, which contain NK cells and HL60 leukemia cells. We explore the efficiency of convolutional neural networks (CNNs) in distinguishing between live and dead tumor cells, as well as different classes of cell death. Three CNN architectures: MobileNetV2, ResNet-18, and ResNet-50 were employed, utilizing transfer learning to optimize performance given the limited size of available datasets. The networks were trained using two loss functions: weighted cross-entropy and generalized dice loss and two optimizers: Adaptive moment estimation (Adam) and stochastic gradient descent with momentum (SGDM), with performance evaluations based on metrics such as mean accuracy, intersection over union (IoU), and BF score. Our results indicate that MobileNetV2 with cross-entropy loss and the Adam optimizer outperformed other configurations, demonstrating high mean accuracy. Challenges such as class imbalance, annotation bias, and dataset limitations are discussed, alongside potential future directions to enhance model robustness and accuracy. The successful training of networks capable of classifying all identified types of cell death, demonstrates the potential for a deep learning approach to identify different types of cell deaths as a tool for analyzing immunotherapeutic strategies and enhance understanding of NK cell behaviors in cancer treatment.

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