京都大学 / 0048 / 新制・課程博士 / 博士(医学) / 甲第19224号 / 医博第4023号 / 新制||医||1010(附属図書館) / 32223 / 京都大学大学院医学研究科医学専攻 / (主査)教授 長船 健二, 教授 稲垣 暢也, 教授 斎藤 通紀 / 学位規則第4条第1項該当 / Doctor of Medical Science / Kyoto University / DFAM

Les cellules souches embryonnaires (ESCs) sont dérivées d'embryons au stade blastocyste. Elles sont caractérisées par la capacité de se diviser et de maintenir un phénotype indifférencié et en présence de stimuli, de se différencier en cellules spécialisées dérivées des trois feuillets embryonnaires, c'est la pluripotence. Elles sont un outil puissant pour modéliser des maladies génétiques à des fins de découvertes en recherche fondamentale et aussi dans un but d’applications cliniques. Les mESCs sont maintenues pluripotentes in vitro en présence de LIF (Leukemia Inhibitor Factor), une cytokine de la famille des Interleukines 6 (IL6) présentant des effets pléiotropes en fonction du type et de la maturité cellulaire. Le retrait de LIF conduit à la différenciation hétérogène des mESCs dont une partie meurt par apoptose. Lors du retrait de LIF, les cellules entrent séquentiellement dans des phases d'engagement réversible (jusqu'à 36h après retrait du LIF) et irréversible, au cours desquelles la re-stimulation par le LIF induit des effets différents. Afin de mieux caractériser cet effet de LIF, nous avons mis au point un « test de plasticité » in vitro et avons étudié l'impact de paramètres environnementaux qui pourraient moduler cette plasticité dans les mESCs. Nous avons montré que la MMP1 (Matrix Metalloproteinase 1), qui peut remplacer le LIF dans le maintien de la pluripotence, est moins efficace pour le maintien de la plasticité cellulaire des mESCs. Nous avons aussi montré que les mESCs restent pluripotentes et plastiques à 3% d'O2, in vitro, et qu’elles se caractérisent par un nouvel équilibre d'expression des gènes et des protéines en comparaison à 20% d'O2. / Embryonic Stem Cells (ESCs) are derived from embryo at the blastocyst stage. These cells are characterized by their properties of self-renewal and pluripotency: ability to divide and maintain an undifferentiated phenotype and to differentiate into specialized cells of the three primary germ layers in the presence of stimuli. ESCs are a powerful tool to modelize genetic diseases for fundamental research and clinical applications. Mouse Embryonic Stem Cells (mESCs) are maintained pluripotent in vitro in the presence of Leukemia Inhibitory Factor (LIF), an Interleukin 6 (IL6) cytokine family member which displays pleiotropic functions, depending on both maturity and type of cells. LIF withdrawal leads to heterogeneous differentiation of mESCs and part of the differentiated cells die by apoptosis. During the kinetics of LIF withdrawal, we show that cells enter a LIF-dependent reversible (up to 36h of LIF withdrawal) and irreversible phase of differentiation in which LIF-restimulation induces differential effects. To better characterize this period and LIF-dependent processes, we settled up an in vitro « plasticity test » and investigated the impact of environmental parameters that could regulate cell plasticity in mESCs. Our results reveal that the Matrix Metalloproteinase 1 (MMP1), which can replace LIF cytokine for maintenance of mESCs pluripotency, mimics its effects in the plasticity window, but with less efficiency. In addition, we demonstrate that mESCs maintain plasticity and pluripotency potentials in vitro, under 3% O2 (physioxic condition) with a new equilibrium of gene and protein expression levels compared to 20% O2.

No description available.

L’acquisition d'une identité cellulaire différenciée est souvent considérée comme définitive et figée dans le temps; or un nombre croissant d’études démontre que les cellules différenciées peuvent faire preuve de plasticité sous certaines conditions. Afin de mieux comprendre ces phénomènes, notre laboratoire a établi un modèle unique chez Caenorhabditis elegans (C. elegans) permettant l’étude d’un événement de transdifférenciation dans un contexte physiologique à l'échelle de cellules uniques. Au cours du développement, une cellule épithéliale du rectum de C. elegans, nommé Y, va migrer antérieurement puis changer d’identité pour devenir un motoneurone nommé PDA. Les travaux préliminaires du laboratoire ont montré que la voie de signalisation LIN-12/Notch est le signal le plus précoce nécessaire pour le bon déroulement de la transdifférenciation de Y en PDA. Nous avons pu mettre en évidence : i) que lors de l’embryogénèse, deux ligands canoniques (apx-1 et lag-2) semblent agir de façon redondante afin d’activer la voie Notch. ii) l’activation ectopique et contrôlée de la voie Notch est suffisante pour induire la formation d’un second neurone PDA. iii) Les facteurs nucléaires que le laboratoire a identifiés comme cruciaux pour l'initiation de cet évènement de TD sont également importants pour la reprogrammation induite de cette deuxième cellule en neurone PDA par l'activation ectopique de Notch. iv) La suractivation prolongée de la voie Notch dans la cellule Y maintien l’identité épithéliale de cette dernière, ayant pour conséquence le blocage de la transdifférenciation de Y en PDA. L’ensemble de nos résultats montrent que la voie Notch est nécessaire et suffisante afin d’établir la compétence à transdifférencier et que cela ne peut être réalisé que si la voie Notch est régulée de façon très précise dans la cellule Y. / The acquisition of a differentiated cell identity is often considered as final and frozen in time. However, a growing number of studies showed that differentiated cells can exhibit plasticity under certain conditions. To better understand these cell plasticity phenomena, our laboratory has developed a unique model in Caenorhabditis elegans (C. elegans) to study a transdifferentiation event in a physiological context and at the single-cell level. During the worm development, an epithelial rectal cell, named Y, will migrate anteriorly and change its identity to become a neuron named PDA. Preliminary work performed by our laboratory showed that the LIN-12/Notch signalling pathway is the earliest signal necessary for the proper conduct of the transdifferentiation of Y into PDA. In our study, we showed that: i) during embryogenesis, two canonical ligands (apx-1 and lag-2) appear to act redundantly to activate the Notch pathway in Y. ii) ectopic and controlled activation of the Notch pathway is sufficient to induce formation of a second PDA neuron. iii) Nuclear factors indentified in our laboratory as crucial for the initiation of this event are also important for transdifferentiation of the second PDA obtained by ectopic activation of Notch. iv) A prolonged activation of the Notch pathway in the Y cell maintains its epithelial identity, which results in the inhibition of the transdifferentiation of Y into PDA. Together, our results showed that the Notch pathway is necessary and sufficient to establish the competence to transdifferentiate. This can only be achieved if the Notch pathway is regulated very precisely in the Y cell.

The preimplantation stages of mammalian development are dedicated to the differentiation of two extraembryonic epithelia, the trophectoderm (TE) and the primitive endoderm (PrE), and their segregation from the pluripotent embryonic lineage, the epiblast. The TE and PrE are responsible for implantation into the uterus and for producing the tissues that will support and pattern the epiblast as it develops into the foetus. PrE and epiblast are formed in a two step process that involves random cell fate specification, mediated by fibroblast growth factor (FGF) signalling, and cell sorting through several mechanisms. In the present work I have addressed aspects of both steps of this process. Chimaera assays showed that epiblast precursors transplanted onto a recipient embryo rarely differentiate into PrE, while PrE precursors are able to switch their identity and become epiblast. Transient stimulation or inhibition of the FGF4-ERK pathway in the chimaeras can modify the behaviour of these cells and restore the plasticity of epiblast precursors. This work shows that epiblast precursors are refractory to differentiation signals, thus ensuring the preservation of the embryonic lineage. I have also found that atypical Protein Kinase C (aPKC) is a marker of PrE cells and that pharmacological inhibition of aPKC impairs the segregation of PrE and epiblast precursors. Furthermore, it affects the survival of PrE cells and can alter the subcellular localisation of the PrE transcription factor GATA4. These data indicate aPKC plays a central role for the sorting of the PrE and epiblast populations and links cell position within the embryo to PrE maturation and survival. Lastly, I have found that aPKC can directly phosphorylate GATA4 in vitro. Knockdown of GATA4 affects cell position within the embryo, whereas aPKC knockdown reduces the number of GATA4-positive cells. These results indicate GATA4 plays an important role in cell sorting during preimplantation development and suggest phosphorylation by aPKC could determine its presence in the nuclei of PrE cells. My work, in the light of the current knowledge, supports a model where the earliest cell fate decisions during mammalian development depend on cellular interactions and not on inherited cell fate determinants. This robust mode of development underlies the plasticity of the preimplantation embryo and ensures the formation of the first mammalian cell lineages, critical for any further progression in mammalian development.

Esophageal cancer (EC) is an aggressive form of cancer, including squamous cell carcinoma (ESCC) and adenocarcinoma (EAC) as two predominant histological subtypes. Accumulating evidence supports the existence of cancer stem cells (CSCs) able to initiate and maintain EAC or ESCC. In this review, we aim to collect the current evidence on CSCs in esophageal cancer, including the biomarkers/characterization strategies of CSCs, heterogeneity of CSCs, and the key signaling pathways (Wnt/β-catenin, Notch, Hedgehog, YAP, JAK/STAT3) in modulating CSCs during esophageal cancer progression. Exploring the molecular mechanisms of therapy resistance in EC highlights DNA damage response (DDR), metabolic reprogramming, epithelial mesenchymal transition (EMT), and the role of the crosstalk of CSCs and their niche in the tumor progression. According to these molecular findings, potential therapeutic implications of targeting esophageal CSCs may provide novel strategies for the clinical management of esophageal cancer.

The majority of our physiological and metabolic processes are coordinated by an internal clock, which has evolved as an adaptive response to the daily light-dark cycles. Thus, several physiological and behavioral activities display an oscillatory rhythmic period of 24 hours. This highly conserved molecular mechanism is achieved through a specific program of gene expression, characterized by a complex interaction between clock-core proteins, chromatin remodelers and epigenetic events associated with the oscillatory nature of circadian transcriptional activity in the genome. Clock disruption leads to a wide spectrum of severe health problems including chronic metabolic disorders, muscle waste and cardiopathies. Previous studies revealed that each cell and organ possess an intrinsic clock and that coordination between central versus peripheral clocks is key for health. Furthermore, it has been found that under nutritional challenge such as High Fat Diet (HFD), the circadian transcriptome and metabolome are rapidly remodeled in the mouse model. Surprisingly, metabolome and gene expression analysis on various tissues revealed that skeletal muscle is the most affected under HFD. Mechanisms that regulate circadian cycle and stress induced rapid adaptation and in particular metabolic stress at the chromatin level are largely unknown. In this study, we investigated the role of Polycomb proteins group (PcG) mediate cell memory system by maintaining transcriptional gene silencing, in particular the PRC2-Ezh1. We hypothesized that Ezh1 could play an important role in circadian clock regulation in post-mitotic skeletal muscle, and this pathway has never been explored in this context. We explored the circadian role of PRC2-Ezh1 in the mouse skeletal muscle. Intriguingly, we found that the oscillatory profile of a novel isoform of Ezh1 (Ezh1beta), localized specifically in the cytoplasm and controlling stress induced nuclear PRC2 activity, was completely disrupted under HFD. More interestingly, the circadian pattern of core clock components was impaired in Ezh1 depleted cells. Our data unveils an interesting physiological role of the PcG memory system, from cytoplasm to chromatin, which could indicate a new link between the chromatin remodeler Polycomb proteins and the endogenous clock in adaptation mechanism in skeletal muscle.

No description available.

A patogênese e o estadiamento do melanoma são clinicamente bem caracterizados, entretanto, muitas variações são observadas no que diz respeito à progressão e respostas terapêuticas. Mecanismos intrínsecos das células de melanoma contribuem para esse fenômeno, como a plasticidade fenotípica e a expressão de determinadas moléculas, como a galectina-3. Galectina-3 tem papel fundamental para o crescimento do tumor, metástase e montagem de uma rede vascular funcional. Dessa forma, o melanoma possui mecanismos alternativos de vascularização, onde células endoteliais e células tumorais formam a superfície luminal dos vasos e são expostas às forças fluídicas do sangue, o shear stress. Nós hipotetizamos que o shear promove a adaptação celular e células de melanoma se comunicam com (1) outras células tumorais para sustentar a progressão do tumor, ou (2) com células endoteliais para garantir a manutenção vascular. Para isso, comparamos dois modelos de geração do shear denominados pela agitação de placas concêntricas e rotação de um cone sobre placa, que é o modelo padrão dos estudos em células endoteliais. O modelo de placas concêntricas gerou resultados mais robustos, pois garantiu a viabilidade e a adesão celular em até 24h. Também investigamos o potencial angiogênico das células de melanoma após monitorar a ativação de células endoteliais em contato com o meio condicionado (MC) do shear. O shear aumentou significativamente a secreção de Angiopoietina-2, IL-8 e PLGF num contexto independente de galectina-3. Além disso, o shear diminuiu a taxa de crescimento das células que expressam galectina-3, o que não foi observado no tratamento com o MC. Já a capacidade de sobreviver em longo prazo foi maior quando as células tumorais são expostas ao MC derivado do shear, sem influência da expressão de galectina-3. Em relação ao efeito do MC liberado após shear para o remodelamento vascular, nós não observamos alteração na proliferação das células endoteliais. Entretanto, o MC do shear parece acelerar a formação de túbulos e favorecer a desorganização das fibras de actina, além de diminuir a fosforilação de ERK nas células endoteliais. Juntos, esses resultados mostram que o shear induz a secreção de moléculas pró-angiogênicas e pró-inflamatórias que promovem a sobrevivência e proliferação a longo prazo das células tumorais naive. Nas células endoteliais, o MC derivado do shear altera a sinalização de ERK e o rearranjo do citoesqueleto / Melanoma pathogenesis and staging are clinically well characterized, although a large variation is observed in progression and therapeutic responses. Intrinsic mechanisms of melanoma cells contribute to this phenomenon, such as phenotypic plasticity and the expression of certain molecules as galectin-3. Galectin-3 plays a prominent role in tumor growth, metastasis, and to build a functional vascular network. In this way, melanoma has alternative mechanisms of vascularization, in which both endothelial cells and tumor cells form the luminal surface of vessels and are in contact with flowing blood. Here, we postulated that shear stress promotes cell adaptation and melanoma cells communicate with (1) other tumor cells in order to support tumor progression; or (2) with endothelial cells to ensure vascular maintenance. We compared two methods for generating shear stress, namely revolution of concentric plates and stirring of a suspended cone on a plate, which is the gold standard method for studies on endothelial cells. The concentric plates model yielded more reliable results, since it ensured the greater viability and adhesion of cells up to 24h, as compared to the cone and plate system. We then investigated the angiogenic potential of melanoma cells by monitoring the activation of endothelial cells upon exposure to the conditioned medium (CM) from cells exposed to shear stress. Shear stress significantly increased the secretion of Angiopoietin-2, IL-8 and PLGF, in a galectin-3 independent manner. Also, shear stress decreased the growth rate of galectin-3 positive melanoma cells, but not when galectin-3 was down regulated. No such effect was observed with the shear-derived CM. Instead, we did observed long-term melanoma survival under low density upon treatment with the shear-derived CM. In this scenario, the expression of galectin-3 did not change the results. Regarding the effect of shear-derived CM to vascular remodeling, endothelial cells did not show any change in cell proliferation. However, the CM of melanoma cells upon shear accelerated the endothelial cell tube formation and disorganized the actin stress fibers. CM also decreased the phosphorylation of ERK. Taken together, these data indicate that the production of proangiogenic and proinflammatory molecules by melanoma cells under shear enables long-term survival and proliferation of naïve melanoma cells. To endothelial cells, shear-derived CM led to changes in ERK signaling and cytoskeletal rearrangement

A patogênese e o estadiamento do melanoma são clinicamente bem caracterizados, entretanto, muitas variações são observadas no que diz respeito à progressão e respostas terapêuticas. Mecanismos intrínsecos das células de melanoma contribuem para esse fenômeno, como a plasticidade fenotípica e a expressão de determinadas moléculas, como a galectina-3. Galectina-3 tem papel fundamental para o crescimento do tumor, metástase e montagem de uma rede vascular funcional. Dessa forma, o melanoma possui mecanismos alternativos de vascularização, onde células endoteliais e células tumorais formam a superfície luminal dos vasos e são expostas às forças fluídicas do sangue, o shear stress. Nós hipotetizamos que o shear promove a adaptação celular e células de melanoma se comunicam com (1) outras células tumorais para sustentar a progressão do tumor, ou (2) com células endoteliais para garantir a manutenção vascular. Para isso, comparamos dois modelos de geração do shear denominados pela agitação de placas concêntricas e rotação de um cone sobre placa, que é o modelo padrão dos estudos em células endoteliais. O modelo de placas concêntricas gerou resultados mais robustos, pois garantiu a viabilidade e a adesão celular em até 24h. Também investigamos o potencial angiogênico das células de melanoma após monitorar a ativação de células endoteliais em contato com o meio condicionado (MC) do shear. O shear aumentou significativamente a secreção de Angiopoietina-2, IL-8 e PLGF num contexto independente de galectina-3. Além disso, o shear diminuiu a taxa de crescimento das células que expressam galectina-3, o que não foi observado no tratamento com o MC. Já a capacidade de sobreviver em longo prazo foi maior quando as células tumorais são expostas ao MC derivado do shear, sem influência da expressão de galectina-3. Em relação ao efeito do MC liberado após shear para o remodelamento vascular, nós não observamos alteração na proliferação das células endoteliais. Entretanto, o MC do shear parece acelerar a formação de túbulos e favorecer a desorganização das fibras de actina, além de diminuir a fosforilação de ERK nas células endoteliais. Juntos, esses resultados mostram que o shear induz a secreção de moléculas pró-angiogênicas e pró-inflamatórias que promovem a sobrevivência e proliferação a longo prazo das células tumorais naive. Nas células endoteliais, o MC derivado do shear altera a sinalização de ERK e o rearranjo do citoesqueleto / Melanoma pathogenesis and staging are clinically well characterized, although a large variation is observed in progression and therapeutic responses. Intrinsic mechanisms of melanoma cells contribute to this phenomenon, such as phenotypic plasticity and the expression of certain molecules as galectin-3. Galectin-3 plays a prominent role in tumor growth, metastasis, and to build a functional vascular network. In this way, melanoma has alternative mechanisms of vascularization, in which both endothelial cells and tumor cells form the luminal surface of vessels and are in contact with flowing blood. Here, we postulated that shear stress promotes cell adaptation and melanoma cells communicate with (1) other tumor cells in order to support tumor progression; or (2) with endothelial cells to ensure vascular maintenance. We compared two methods for generating shear stress, namely revolution of concentric plates and stirring of a suspended cone on a plate, which is the gold standard method for studies on endothelial cells. The concentric plates model yielded more reliable results, since it ensured the greater viability and adhesion of cells up to 24h, as compared to the cone and plate system. We then investigated the angiogenic potential of melanoma cells by monitoring the activation of endothelial cells upon exposure to the conditioned medium (CM) from cells exposed to shear stress. Shear stress significantly increased the secretion of Angiopoietin-2, IL-8 and PLGF, in a galectin-3 independent manner. Also, shear stress decreased the growth rate of galectin-3 positive melanoma cells, but not when galectin-3 was down regulated. No such effect was observed with the shear-derived CM. Instead, we did observed long-term melanoma survival under low density upon treatment with the shear-derived CM. In this scenario, the expression of galectin-3 did not change the results. Regarding the effect of shear-derived CM to vascular remodeling, endothelial cells did not show any change in cell proliferation. However, the CM of melanoma cells upon shear accelerated the endothelial cell tube formation and disorganized the actin stress fibers. CM also decreased the phosphorylation of ERK. Taken together, these data indicate that the production of proangiogenic and proinflammatory molecules by melanoma cells under shear enables long-term survival and proliferation of naïve melanoma cells. To endothelial cells, shear-derived CM led to changes in ERK signaling and cytoskeletal rearrangement