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A study of the dynamics and functions of a coastal dunefield at the Bushman’s River Mouth in Kenton-on-Sea was conducted to provide essential information for the formulation of a management strategy based on an ecosystem approach. Bi-monthly tacheometric surveys were undertaken at the Westbourne Road Car Park dunefield to investigate the sedimentological processes. Changes in the topography, the amount and rate of sand accretion were monitored. Accretion and progradation were the dominant long-term sedimentological processes at the site. Long-term spatial variation in these processes corresponded to the temporal pattern of sedimentation in the river mouth while short-term variation resulted from dynamics inherent to the types of dunes present. Factors affecting aeolian accretion at the site are topography, river mouth configuration, dune types and the presence of vegetation as well as the seasonal wind regime. A vegetation study, recording species present, cover and abundance of the plants along the surveyed transects, was also conducted to examine the progressive establishment of vegetation. Five plant communities were discerned namely, saltmarsh, pioneer, enriched pioneer, open scrub, closed scrub and scrub-thicket communities. The spatial distribution of these communities coincided with the north-westerly development of the sandbank. A successional trend in community change occurred along a gradient of increasing diversity, complexity and age. Initially, autogenic changes wrought by pioneer species facilitated the recruitment and survival of other species and commenced succession at the study site. Multiple successional pathways were discussed in relation to subsequent species establishment that occurred after facilitation. The amalgamation of ecological data with a social study in the form of public perception surveys allowed for a greater understanding of the present interactions between the ecosystem and the demands placed on it. The area primarily functions as a recreational site that offered numerous beach and water-related activities. A lack of information regarding the ecology and management programmes influenced public perception of the environment and management issues in general. Different management perspectives and the use of the information presented in this study were also discussed.

Sodwana Bay, situated within the iSimangaliso Wetland Park, is ecologically important as it contains high-latitude corals and the most southerly known population of coelacanths. This thesis utilised stable isotope and lipid analyses to investigate the trophic ecology of the area, in particular, understanding the relative contribution of inshore and offshore primary production to consumers inhabiting intertidal and shallow subtidal, coral reef, deep reef, canyon head and pelagic habitats. Seaweeds, excluding certain species of red seaweeds with highly depleted carbon signatures, and phytoplankton, such as diatoms, were found to be the principal sources of primary production for all consumers. Offshore production was typified by dinoflagellates. Particulate organic matter (POM) was spatio-temporally variable. Three distinct productivity periods related to nutrient cycling were noted with enriched carbon signatures and higher organic matter loads associated with warmer water. Inshore primary production was an important source of carbon to consumers in all habitats with the exception of zooplankton that were more reliant on pelagic primary production. Benthic invertebrates reflected a gradient in the utilisation of inshore production, due to the reduced availability of this source further offshore. Consumers at the furthest sites offshore were found to include a substantial quantity of inshore-derived production in their diets. Fishes, which are more mobile, were found to incorporate a similar proportion of inshore production into their diets regardless of where they were collected from.

An investigation of ecosystem functioning of sandy beaches in the Nelson Mandela Bay Municipality (NMBM) was carried out with the aim of describing their type and pollution status. Water salinity, temperature, pH, beach slope, water inorganic nutrient concentrations, urea, and chlorophyll-a concentration as well as the composition of zooplankton, phytoplankton, meiofauna, benthic microalgae and bacteria were examined at thirteen beaches. The beaches were classified into three types: short beaches; long beaches with surf diatoms; and long beaches that import biomass (without surf diatoms). Of the thirteen beaches, five were non-polluted and eight polluted with polluting human activities in and around them. Most beaches were dominated by fine sand except for St. Georges Strand where the particles were medium to fine sand and Maitland’s River Beach, Bluewater Bay and Sardinia Bay that had coarse sand. Nutrient concentrations ranged from 1.98 ± 0.10 μM to 19.30 ± 3.02 μM nitrate; 4.88 ± 1.00 μM to 11.97 ± 1.00 μM ammonium; 0.67 ± 0.00 μM to 2.31 ±1.00 μM soluble reactive phosphorus; and 0.00 to 0.03 ± 0.00 μg l-1 urea-N. Chlorophyll-a concentrations ranged from 0.04 ± 0.02 to 1.57 ± 0.11 μg l-1. Chlorophyll-a concentrations were negatively correlated to ammonium for all beach types (short beaches: r = 0.94; long importing beaches: r = 0.95 and surf diatom beaches: 0.94) and to nitrate for short and long importing beaches (short: r = 0.97 and long importing: r = 0.85). By contrast, a positive correlation was found between observed between chlorophyll-a concentrations and urea for surf diatom beaches (r = 0.93) and for long importing beaches (r = 0.73). Chlorophyll-a concentrations were negatively correlated to short beaches (r = 0.99) and long importing beaches (r = 0.76). The E. coli and total coliforms in all the sampled beaches were within the recommended South African water quality guidelines for contact recreation as specified by DWAF (1995) except at New Brighton Beach (2 419 total coliforms/100 ml and 1 853 E. coli cells/100 ml) and St. Georges Strand (274 total coliforms/100 ml). Diatoms dominated the phytoplankton and benthic microflora; calanoid copepods dominated the zooplankton and deposit-feeding nematodes dominated the meiofauna in all the beaches with no changes found at polluted beaches.

Organisms inhabit environments that have many dimensions, each of which can vary temporally and spatially. The spatial-temporal variations of environmental stressors and disturbances may have major but different effects on indigenous and invasive species, favouring either of them at different times and places. The invasive mussel Mytilus galloprovincialis invaded the South African coast 30 years ago and, on the south coast of South Africa, it now competes and co-exists with the indigenous Perna perna in the lower eulittoral zone (referred to here as the mussel zone) The invasive and indigenous species dominate the upper and the lower mussel zones respectively, while the two co-exist in the mid-zone. My results show that intertidal mussels experience, and respond to, spatial and temporal fluctuations of several biotic and abiotic stressors. The invasive and the indigenous species adopt different strategies when reacting to environmental factors and their physiological and behavioural responses vary in time and in different habitats as different pressures become of overriding importance. Attachment strength of both species decreased in summer and increased in winter, and was higher on the open coast than in bays for both species, showing a strong positive correlation with wave force in time and space. P. perna had significantly higher attachment strength than M. galloprovincialis but, contrary to previous studies, the difference in gonad index between the two species varied according to the habitat. In bay habitats, M. galloprovincialis had a higher maximum reproductive effort than P. perna, however, on the open coast, there was no significant difference between the two species, suggesting that for the invasive species wave action is a limiting factor not only in terms of the attachment strength but also of energy availability for reproductive tissue development. Major spawning events occurred during periods of low wave action while minor spawning coincided with periods of intense hydrodynamic stress. On the open coast, gonad index was negatively correlated with attachment strength for both species while, in bays, there was no correlation between these two factors for either. The two species also showed different behaviour. In the field, M. galloprovincialis moved significantly more than P. perna over a period of six months. The higher mobility of the invasive species was also confirmed in the laboratory where, in general, M. galloprovincialis formed clumps more readily than P. perna. Taken collectively, these results suggest that channelling more energy into attachment strength limits reproductive tissue development and that, while the indigenous species invests more in byssal production, the invasive species adopts a more dynamic strategy looking for aggregation or a safer arrangement. Higher endolithic infestation and a greater expression of heat shock proteins (Hsps) in mussel populations on the open coast than in bays indicate that this habitat is a more stressful environment not only in terms of wave action. Endolith damaged mussels had significantly lower attachment strengths and condition indices than clean mussels, probably due to the need to channel energy into shell repair. The constant shell repair and expression of Hsps typical of open coast populations are energetically demanding processes. These observations suggest that on the open coast, mussels are subjected to more severe energetic constraints than in bay habitats. Wave and sand stress fluctuated seasonally with the former having a greater effect on mussel mortality on the open coast and the latter a higher impact on bay populations. Overall, mussel mortality rates were higher on the open coast than in bays. My results show that populations on the open coast had fewer private haplotypes and less genetic endemism than those inside bays. Gene flow analysis showed the relatively stable bay habitats act as source populations with greater genetic migration rates out of bays than into them. These differences in genetic structure on scales of las of kilometers show that coastal configuration strongly affects selection, larval dispersal and haplotype diversity. Environmental gradients that are key factors in species distribution over large geographical scales can also be responsible for micro-scale distributions. My results show that M. galloprovincialis colonizes the upper mussel zone where temperature is high, but is less tolerant to this stressor and has to maintain a high expression of Hsps. This suggests that temperature is probably a limiting factor in its invasion towards the sub-tropical east coast. There are inter- and intra-specific differences in responses to the environment which highlight the efforts of M. galloprovincialis and P. perna to optimize resource utilization for survival and reproduction. Determining these differences is crucial to understanding patterns of co-existence between competing indigenous and invasive species.

When considering the large amount of work done on dune ecology, and that a number of the classical ecological theories originate from work on dunes, it is apparent that there remains a need for physiological and mechanistic explanations of dune plant phenomena. This thesis demonstrated that in the extreme coastal environment dune plants must survive both high rates of burial (disturbance), and low nutrient availability (stress). The ability of four species to respond to these two factors corresponded with their position in a vegetation gradient on the dunes. A low stem tissue density was shown to enhance the potential stem elongation rate of buried plants, but reduced the maximum height to which a plant could grow. Such a tradeoff implies that tall light-competitive plants are able to survive only in stable areas, while burial responsive mobile-dune plants are limited to areas of low vegetation height. This stem tissue density tradeoff was suggested as the mechanism determining the zonation that species show within the dune vegetation gradient present at various sites in South Africa. Finally, detailed investigations of dune plant ecophysiology found that: 1) The resources used in the response to burial derive from external sources of carbon and nitrogen, as well as simple physiological and physical mechanisms of resource allocation. 2) The leaves of dune plants were found to be operating at one extreme of the photosynthetic continuum; viz efficient use of leaf nitrogen at the expense of water loss. 3) Contrary to other ecosystems, the environmental characteristics of dunes may allow plants to occupy a high disturbance, high stress niche, through the maintenance of lowered competition. 4) At least two mobile-dune species form steep dunes, and are able to optimise growth, on steeper dunes, such that they have to grow less in response to burial than plants that form more shallow dunes. In this thesis, it was shown that the link between the carbon and nitrogen economies of dune plants was pivotal in determining species distributions and survival under extreme environmental conditions. As vast areas of the world’s surface are covered by sand dunes these observations are not just of passing interest.

Studies of the dunefield systems crossing the Cape St. Francis headland in the Eastern Cape have focused on the role that wind plays in sediment transfer in coastal dunefield systems, with limited consideration of the role of water. The aim of this study was to improve understanding of the morphology, processes and patterns within the Oyster Bay HBD system, focussing particularly on surface water and groundwater interactions and the role of surface water in sediment transfer across the dunefield system. An extensive field survey was conducted, to collect related data, complimented by spatial and temporal analysis of the study area using GIS. The key findings from this research were the apparent differences between the western and eastern regions of the dunefield with regard to specific drivers and the respective processes and responses. Wind is the major driver of change up to and across the crest of the dunefield. In the eastern region water (ground water, surface water and the Sand River System) is the primary agent of sediment flux through processes of aggregation and slumping as well as episodic events including debris flows. This study has highlighted a need for further quantitative studies that investigate the movement of sediment through dunefield systems such as this (where water is at or near the land surface). The paradigm that sediment flux is entirely due to wind is almost certainly simplistic, and deeper understanding of these systems is needed / Maiden name: Elkington, Lauren