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Chloroplast DNA diversity in Packera (asteraceae) : a phylogeographic study of Packera contermina and three related species from southwestern Alberta based on chloroplast DNA variationGolden, Joanne L., University of Lethbridge. Faculty of Arts and Science January 1999 (has links)
Members of the genus Packera (Asteraceae) are widespread in North America, but most are found in western regions of the continent where extensive morphological integradation is common. Previous molecular systematic studies found that four species in southwestern Alberta, a region proposed to be at the interface of the Cordilleran and Laurentide ice sheets during the last advance of Pleistocene glaciation, showed unusually high levels of inter- and intrapopulational chloroplast DNA variation. The present study analyzed chloroplast haplotype phylogeny, frequency variation, and geographic distribution patterns in Packera contermina and closely related species P. pseudaurea, P. cana, and P. cymbalarioides from southwestern Alberta, nothern Montana, and northwestern Wyoming. Restriction site analyses of chloroplast DNA from 730 individuals across 34 populations of the four species revealed fifteen haplotypes, of which seven are commonly found in other North American Packera species. Three haplotypes were detected in P. cymbalarioides, seven in P. cana, eight in P. pseudaura, and twelve in P. contermina. The level of ahplotype frequency variation among populations was high in P. cymbalarioides (0=I) moderate to low in P. contermina (0=0.333) and P.cana (0=0.261), and very low in P.pseudaurea (0=0.085), possibly reflecting differences in the species' history. Phylogenetic analyses revealed 2 groups of haplotypes, one of which is found mainly in populations from the Great Basin of North America and the second in populations of more coastal and northern regions. The presence of haplotypes from both groups of Packera species suggests that the cpDNA diversity in southern Alberta arisen through hybridization/introgression events that have involved a number of species from outside of the region. / x, 81 leaves : ill., maps ; 28 cm.
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A systematic study of Berkheya and allies (Compositae)Phaliso, Ntombifikile January 2013 (has links)
Berkheya Ehrh. is a genus of daisies in the tribe Arctotideae, subtribe Gorteriinae with over 80 species, most of which occur in southern Africa. This genus has centres of diversity associated with the montane regions of South Africa, including the Drakensberg Alpine Centre and Mpumalanga escarpment regions. Previous molecular and morphological studies indicate that Berkheya is paraphyletic. I present phylogenies based on nrDNA (ITS; Internal Transcribed Spacer) and cpDNA (psbA-trnH) sequence data analysed with Bayesian Inference and Parsimony. A phylogeny of combined cp- and nrDNA is also presented. These phylogenies are used to assess generic limits and to investigate the biogeographic patterns of Berkheya and its allies. The ITS phylogeny shows five well supported clades of Berkheya, two of which (Clades I and 2) are monophyletic summer rainfall region clades. Clades 3 to 5 are all paraphyletic winter rainfall clades with Cullumia occurring in the third clade, Cuspida occurring in the fourth and Didelta in Clade 5. Both psbA-trnH and combined phylogenies show concordance with the clade distribution shown in the ITS phylogeny. The ITS phylogeny was used to analyse correspondence with Roessler’s (1959) Series. It was found that the phylogeny showed considerable agreement with Roessler’s series, but B. bipinnatifida and B. spinosa of Series Speciosae may require some revision as well as taxa of monotypic series Cruciatae and Angustae. It is suggested that the latter series be merged with Cullumia species to form a single series. Some consideration should be taken to include Didelta species into Series Fruticosae as Didelta occurs in subclade 5b of Clade 5 with other Series Fruticosae taxa. Achene morphology was examined from species from each of the five clades to investigate the relationships of Berkheya and its allies, as well as to determine if there were any consistent achene features for each clade. The structure of surface cells on the fruit, the presence, absence and morphology of twin hairs as well as the structure of the pappus scales were found to be most useful in reflecting phylogenetic relationships within the clades. When compared with the clades of the ITS phylogeny, achene morphology showed consistent characters between taxa occurring in the same clades. As the most comprehensive study involving Berkheya, this phylogenenetic investigation was able to confirm that Berkheya is a paraphyletic genus with Didelta, Cullumia and Cuspida needing to be subsumed into Berkheya. An alternative classification is that taxa of Clade 5 could possibly be erected as an expanded Didelta, separate and sister to Berkheya.
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