Phosphorus (P) is a requirement for biological growth, but this vital nutrient is present at low or limiting concentrations across vast areas of the global surface ocean. Inorganic polyphosphate (poly-P), a linear polymer of at least three orthophosphate units, is one component of the marine P cycle that has been relatively overlooked as compared to other P species, owing in part to a lack of routine analytical techniques that cleanly evaluate it within samples. This thesis demonstrates that inorganic poly-P is a quantitatively significant and dynamic component of the global marine P cycle while also establishing two new techniques for its analysis in biological and environmental samples. In Chapter 2, experiments using the freshwater algae Chlamydomonas sp. and Chlorella sp. illustrate X-ray fluorescence spectromicroscopy as a powerful tool for the sub-micron scale assessment of poly-P composition in organisms. This method enabled the discovery, detailed in Chapter 3, of a mechanism for the long-term sequestration of the vital nutrient P from marine systems via the initial formation of poly-P in surface waters and its eventual transformation into the mineral apatite within sediments. The importance of marine poly-P is furthermore established in Chapter 3 by observations showing that naturally-occurring poly-P represents 7-11% of total P in particles and dissolved matter in Effingham Inlet, a eutrophic fjord located on Vancouver Island, British Columbia. In Chapter 4, a new fluorometric protocol based on the interaction of inorganic poly-P with 4',6-diamidino-2-phenylindole (DAPI) is established as a technique for the direct quantification of poly-P in environmental samples. Chapter 5 presents work from Effingham Inlet utilizing this method that show that inorganic poly-P plays a significant role in the redox-sensitive cycling of P in natural systems.

The dominant organic phosphorus compound classes were characterized in marine samples using a new, high recovery method for isolating and concentrating bulk dissolved organic matter (DOM) called combined electrodialysis+reverse osmosis (ED/RO). In contrast to earlier studies which use ultrafiltration (UF) to recover only the high molecular weight DOM, ED/RO is capable of isolating both low molecular weight (LMW) and high molecular weight (HMW) DOM. Samples were collected from a broad range of marine environments: along a transect incorporating coastal and offshore waters off the Southeastern United States, in Effingham Inlet, a Pacific fjord located on Vancouver Island, British Columbia and in the Amundsen Sea, Antarctica. Results from phosphorus nuclear magnetic resonance (31P NMR) analysis reveals a similar abundance of P compound classes between samples, phosphate esters (80-85%), phosphonates (5-10%) and polyphosphates (8-13%). These samples contain significantly higher proportions of polyphosphate P and P esters and lower proportions of phosphonates than measured in previous studies using the UF method. The much higher levels of polyphosphate detected in our samples suggests that polyphosphate is present mainly in the LMW DOM fraction. Polyphosphates in DOM may be present as (or derived from) dissolved nucleotides or organismal polyphosphate bodies, or both. Low molecular weight P esters are likely composed of phosphoamino acids and small carbohydrates, like simple sugar phosphates and/or dissolved nucleotides. Phosphonates in DOM are more prevalent as HMW phosphonate compounds, which suggests that LMW phosphonates are more readily utilized in marine ecosystems. Overall, the investigation of DOM across a size spectrum that includes both the HMW and the LMW fractions reveals a new picture of phosphorus distribution, cycling and bioavailability.