Vascular diseases, such as stroke and heart attacks, account for more than 50% of abnormal death worldwide. The cause of these diseases is linked to malfunctions of vascular endothelial cells, in particular the endothelial glycocalyx. This study investigates the location and stability of the endothelial glycocalyx under different flow conditions in vitro. AFM (Atomic Force Microscopy) micro indentation is carried out on endothelial cell membrane to determine its Young's modulus. The Young's modulus of the glycocalyx layer is then deduced from measurements on cell membranes with, and those without, the glycocalyx layer. Heparan sulphate (HS) is an important component of the glycocalyx and can be removed by the enzyme heparinase-III (Hep-III). Our results show the glycocalyx on cultured Human Umbilical Vein Endothelial Cells (HUVECs) has a Young's modulus of ~0.64Kpa. We further observe how the Young's modulus of the endothelial cell membrane decreases with time, as the glycocalyx layer redevelops, following its removal by Hep-III. Steady and oscillatory shear stimulations are used in flow chamber experiments. Under 24 hours' steady shear stimulation (12.6 dyn/cm2), cells are seen to elongate and reorient parallel to the flow direction. The glycocalyx is seen to shift to the peripheral region of the cell surface. With actin depolymerisation treatment, significant shedding of the glycocalyx from the luminal surface of the cell is observed. This occurs together with the loss of focal adhesions on the basal membrane. When endothelial cells are subjected to 24 hours' oscillating shear stress, the size of the cell increases as the oscillatory reversal time (time between changes in oscillatory flow direction) increases. Measurements are taken with oscillatory flow reversal programmed at 5s, 10s and 15s. The angle (between the long axis of the cell and the flow direction) and the aspect ratio (long axis vs short axis) change from 41.57° and 1.72 : 1 (static) to 40.18° and 3.26 : 1 (5s), 36.71° and 4.17 : 1 (10s), 26.5° and 4.39 : 1 (15s). Both the height and the area of the cell increase. The Young's modulus of the endothelial cell membrane is measured under oscillatory flows with different reversal time and compared to that under static flow conditions. An increase in the Young's modulus is observable under oscillatory flows, with the most significant change occurring at the edge (i.e. periphery) of the cell membrane area. As the oscillatory reversal time increases from 5s to 15s, the Young's modulus of the cell membrane increases. In the apical areas of the cell membrane, the increase is less significant. These results indicate that the thickness of the glycocalyx decreases as cells are exposed to oscillatory flows, and the loss is most significant in the peripheral region of the cell membrane. As the oscillatory reversal time increases from 5s to 15s, so the loss in the glycocalyx increases.

The physiological and clinical considerations of centrifugal and axial pumps as ven- tricular assist devices (VADs) demands limitations on the power, size and geometry of the impellers. A typical pump design method is to rely on the characteristics of previously designed pumps with known performance using empirical equations and nondimensional parameters based on uid dynamics similarity law. Such data are widely available for industrial pumps operating in Reynolds number region of 108. VADs operate in Re < 106 and therefore the similarity concept does not apply between the industrial diagrams and the medical application of small pumps. The present dissertation employs a parametric approached analytical model to in- vestigate more than 150 axial and centrifugal pumps. The design parameters are optimised using the response surface methodology. The effect of different design parameters on the performance, force analysis and hemocompatibility of the pumps is thoroughly investigated by modelling the haemolysis through a power-law equation. The results show an explicit and consistent relationship between the number of blades, outlet width, outlet angle and the hemocompatibility of the device. Centrifu- gal pumps showed signi cantly lower probability of blood complications compared to axial pumps. The evaluation of the design characteristics helps pump designers to select their parameters accordingly for a low probability of blood complications. Furthermore, experimental techniques are employed to test more than 70 pumps in different conditions of flow, pressure and rotational speed. The experimental results validate the numerical simulations and create a database of empirical equations and data points for small axial and centrifugal pumps. The specifi c speed and speci fic diameters of the pumps are plotted on an ns − ds diagram to enable preliminary design of small pumps for VADs suitable for different stages of congestive heart failure (CHF).

Fibres with ultra-high tensile strength have attracted unprecedented attention due to the rapidly increasing demand for strong fibre reinforced composites in various fields. However, despite a theoretical strength as high as around 46 GPa, current commercial alumina fibres only reach strength value of around 3.3 GPa because of the defects between the grains. Electrospinning provides a method to produce ceramic nanofibres with diameters reduced to nano-scale with effectively enhanced strength. Different calcination procedures were applied to study the morphology and crystal structure growth of alumina. Tested with a custom-built AFM-SEM system, the tensile strength of single crystal α-alumina nanofibres were found to have little dependence on diameter variations, with an average value of 11.4±1.1 GPa. While the strength of polycrystalline γ-alumina nanofibres were controlled by defects, showing a diameter dependent mechanism. Apart from the intrinsic properties of the fibre and matrix, the interface between them also plays an important role in determining composite mechanical properties. Collected by a rotating drum during electrospinning, aligned fibres were used to reinforce polycarbonate matrix for fabricating composite. The composite mechanical properties were successfully improved after surface modification with silane coupling agent. With a fibre volume fraction of around 7.5%, the composite strength doubled and the Young's modulus increased by a factor of 4 when compared with the pure polycarbonate. Apart from surface modification, the fibre/matrix interface can also be affected by transcrystallinity. Transcrystalline layers were formed in the alumina reinforced polycarbonate composites after annealing. Significant enhancement of the Young's modulus of the crystallized polycarbonate by a factor of 3 compared to the amorphous phase was measured directly using AFM based nanoindentation. Optimization of the Young's modulus is suggested as a balance between extending the annealing time to grow the transcrystalline layer and reducing the processing time to suppress void development in the PC matrix.

The hydrodynamic behaviour of fine suspended aqueous sediments, and stability of the bedforms they create once settled, are governed by the physical properties (e.g., size, shape, porosity and density) of the flocculated particles in suspension (flocs). Consequently, accurate prediction of the transport and fate of sediments and of the nutrients and pollutants they carry depends on our ability to characterise aqueous flocs. Current research primarily focuses on characterising flocs based on their external gross-scale (>1 μm) properties (e.g., gross morphology, size and settling velocity) using in situ techniques such as photography and videography. Whilst these techniques provide valuable information regarding the outward behaviour of flocculated sediment (i.e. transport and settling), difficulties associated with extracting 3D geometries from 2D projections raises concerns regarding their accuracy and key parameters such as density can only be estimated. In addition, they neglect to inform on the internal micro- and nano-scale structure of flocs, responsible for much of their behaviour and development. Transmission electron microscope (TEM) and environmental electron microscope may be used to obtain nano-scale information in, essentially, 2D but there is a large scale gap between this information and the macro-scale of optical techniques. To address this issue this study uses 3D tomographic imaging over a range of spatial scales. Whilst commonly used in materials science and the life sciences, correlative tomography has yet to be applied in the environmental sciences. Threading together 3D Xray micro-computed tomography (X-ray μCT) and focused ion beam nano-tomography (FIBnt) with 2D TEM makes material characterisation from the centimetre to nanometre-scale possible. Here, this correlative imaging strategy is combined with a non-destructive stabilisation procedure and applied to the investigation of flocculated estuarine sediment, enabling the multi length-scale properties of flocs to be accurately described for the first time. This work has demonstrated that delicate aqueous flocs can be successfully stabilised via a resin embedding process and contrasted for both electron microscopy and X-ray tomography imaging. The 3D information obtained can be correlated across all length-scales from nm to mm revealing new information about the structure and morphology of flocs. A new system of characterising floc structure can be defined based on the association of particles and their stability in the structure rather than simply their size. This new model refutes the postulate that floc structures are fractal in nature.

Light-addressable potentiometric sensors (LAPS) and scanning photo-induced impedance microscopy (SPIM) have been extensively applied as chemical sensors and biosensors. This thesis focuses on the investigation of LAPS and SPIM for electrochemical imaging based on two different semiconductor substrates, silicon on sapphire (SOS) and indium tin oxide (ITO) coated glass. Firstly, SOS substrates were modified with 1,8-nonadiyne self-assembled organic monolayers (SAMs), which served as the insulator. The resultant alkyne terminals provided a platform for the further functionalization of the sensor substrate with various chemicals and biomolecules by Cu(I)-catalyzed azide alkyne cycloaddition (CuAAC) 'click' reactions. The CuAAC reaction combined with microcontact printing (μCP) was successfully used to create chemical patterns on alkyne-terminated SOS substrates. The patterned monolayers were found to be contaminated with the copper catalyst used in the click reaction as visualized by LAPS and SPIM. Different strategies for avoiding copper contamination were tested. Only cleaning of the silicon surfaces with an ethylenediaminetetraacetic acid tetrasodium salt (EDTA) solution containing trifluoroacetic acid after the 'click' modification proved to be an effective method as confirmed by LAPS and SPIM results, which allowed, for the first time, the impedance of an organic monolayer to be imaged. Furthermore, the 1,8-nonadiyne modified SOS substrate was functionalized and patterned with an RGD containing peptide, which was used to improve the biocompatibility of the substrate and cell adhesion. By seeding cells on the peptide patterned sensor substrate, cell patterning was achieved. Single cell imaging using LAPS and SPIM was attempted on the RGD containing peptide modified SOS substrate Finally, an ITO coated glass substrate was used as a LAPS substrate for the first time. The photocurrent response, the pH response, LAPS and SPIM imaging and its lateral resolution using ITO coated glass without any modification were investigated. Importantly, single cell images were obtained with this ITO-based LAPS system.

In the context of gradient-based numerical optimisation, the adjoint method is an e cient way of computing the gradient of the cost function at a computational cost independent of the number of design parameters, which makes it a captivating option for industrial CFD applications involving costly primal solves. The method is however a ected by instabilities, some of which are inherited from the primal solver, notably if the latter does not fully converge. The present work is an attempt at curbing primal solver limitations with the goal of indirectly alleviating adjoint robustness issues. To that end, a novel discretisation scheme for the steady-state incompressible Navier- Stokes problem is proposed: Mixed Hybrid Finite Volumes (MHFV). The scheme draws inspiration from the family of Mimetic Finite Di erences and Mixed Virtual Elements strategies, rid of some limitations and numerical artefacts typical of classical Finite Volumes which may hinder convergence properties. Derivation of MHFV operators is illustrated and each scheme is validated via manufactured solutions: rst for pure anisotropic di usion problems, then convection-di usion-reaction and nally Navier-Stokes. Traditional and novel Navier-Stokes solution algorithms are also investigated, adapted to MHFV and compared in terms of performance. The attention is then turned to the discrete adjoint Navier-Stokes system, which is assembled in an automated way following the principles of Equational Di erentiation, i.e. the di erentiation of the primal discrete equations themselves rather than the algorithm used to solve them. Practical/computational aspects of the assembly are discussed, then the adjoint gradient is validated and a few solution algorithms for the MHFV adjoint Navier-Stokes are proposed and tested. Finally, two examples of full shape optimisation procedures on internal ow test cases (S-bend and U-bend) are reported.