Scientific phenomena are often studied through collections of related scalar fields such as data generated by simulation experiments that are parameter or time dependent . Exploration of such data requires robust measures to compare them in a feature aware and intuitive manner. Topological data analysis is a growing area that has had success in analyzing and visualizing scalar fields in a feature aware manner based on the topological features. Various data structures such as contour and merge trees, Morse-Smale complexes and extremum graphs have been developed to study scalar fields. The extremum graph is a topological data structure based on either the maxima or the minima of a scalar field. It preserves local geometrical structure by maintaining relative locations of extrema and their neighborhoods. It provides a suitable abstraction to study a collection of datasets where features are expressed by descending or ascending manifolds and their proximity is of importance. In this thesis, we design a measure to understand the similarity between scalar fields based on the extremum graph abstraction. We propose a topological structure called the complete extremum graph and define a distance measure on it that compares scalar fields in a feature aware manner. We design an algorithm for computing the distance and show its applications in analyzing time varying data such as understanding periodicity, feature correspondence and tracking, and identifying key frames.

Scalar fields are used to represent physical quantities measured over a domain of interest. Study of symmetric or repeating patterns in scalar fields is important in scientific data analysis because it gives deep insights into the properties of the underlying phenomenon. This thesis proposes three methods to detect symmetry in scalar fields. The first method models symmetry detection as a subtree matching problem in the contour tree, which is a topological graph abstraction of the scalar field. The contour tree induces a hierarchical segmentation of features at different scales and hence this method can detect symmetry at different scales. The second method identifies symmetry by comparing distances between extrema from each symmetric region. The distance is computed robustly using a topological abstraction called the extremum graph. Hence, this method can detect symmetry even in the presence of significant noise. The above methods compare pairs of regions to identify symmetry instead of grouping the entire set of symmetric regions as a cluster. This motivates the third method which uses a clustering analysis for symmetry detection. In this method, the contours of a scalar field are mapped to points in a high-dimensional descriptor space such that points corresponding to similar contours lie in close proximity to each other. Symmetry is identified by clustering the points in the descriptor space. We show through experiments on real world data sets that these methods are robust in the presence of noise and can detect symmetry under different types of transformations. Extraction of symmetry information helps users in visualization and data analysis. We design novel applications that use symmetry information to enhance visualization of scalar field data and to facilitate their exploration.