M.Sc. / Please refer to full text to view abstract

Thesis (M. A. (Aquaculture )) -- University of Limpopo, 2006 / Refer to document / NRF (National Research Foundation) and Canon Collins Educational Trust for Southern Africa (CCETSA)

INTRODUCTION: Estuaries have received considerable attention from biologists in southern Africa in the past thirty years. Professor J.H. Day and the Zoology Department of the University of Cape Town have undertaken ecological surveys of a large number of estuaries of a variety of types, laying the important groundwork for more detailed studies of single species or problems. Their studies showed that the fish populations of southern African estuaries consist mainly of marine species. Why and when these species enter or leave the estuaries and whether they grow or breed in them were not established. The only relatively detailed study of a fish in southern African estuaries was that of Talbot (1955) who investigated aspects of the growth, feeding and reproduction of Rhabdosargus globiceps (Cuvier). No quantitative information has been published on any of the fish species, perhaps due to the difficulty of obtaining such data; results such as population estimates, mortality rates and growth rates are particularly unreliable when the area being investigated is in direct contact with the sea. Studies relating to even a single species of fish are hampered by immigration and emigration between estuary and sea, which make the population continuously variable. The larger estuaries are also difficult to sample adequately, especially with regard to netting, except perhaps on a very large scale using expensive commercial equipment. Along the southern African coast many of the smaller estuaries with a limited catchment area are cut off from the sea for most of the year due to erratic rainfall and longshore drift of sand. These closed or 'blind' estuaries of south eastern Africa, of which there are at least thirty in the eastern Cape Province, provide excellent areas for studying estuarine fish populations which enter when the estuary is open to the sea, but become isolated once it closes. These fish which become cut off in closed estuaries are subject to a new series of conditions. They are exposed to the wider temperature and salinity fluctuations of an estuary and they are forced to utilise the food resources of the estuary. Additionally they may be subjected to predation from piscivorous birds, and those predatory fish which are also cut off in the estuary. These factors will affect the size, mortality, and growth rates of a fish population. Since the fish are isolated no recruitment from the sea can take place, and any increase in numbers would have to come from breeding within the estuary. It is inevitable that the most numerous species should receive attention first. Rhabdosargus holubi (Steindachner) (Synonomy : Sargus holubi Stndr, Austrosparus tricuspidens Smith, Rhabdosargus tricuspidens (Smith))(Plate 1) is one of the most abundant fish in the estuaries of the eastern Cape Province. According to Smith (1965) it is endemic to southern Africa, occurring from the Cape to Zululand, being most common between Mossel Bay and East London. It is largely replaced by Rhabdosargus sarba (Forskal) in the north of its range and by Rhabdosargus globiceps (Cuvier) in the south. Commonly called the 'flatty' or silver bream it is considered only as being of nuisance value by fishermen, seldom exceeding 30 cm in length. In this study the ecology of R.holubi was examined in relation to the closed West Kleinemond estuary which is a small 'blind' estuary typical of those found along the eastern Cape coast. The growth, mortality and population size of R.holubi in this estuary were investigated and linked where possible with predation and detailed studies into the tolerances, food, and feeding of the species. It was not known at the commencement of the study whether breeding could occur in estuaries, although Smith (1965) stated that R.holubi does breed in estuaries. During the course of the sampling programme in the West Kleinemond estuary, measurements of the growth and population structure of two other species of fish were recorded for comparison with R.holubi: the sparid Lithognathus lithognathus (Cuvier) (White Steenbras) and the piscivorous carangid Hypacanthas amia (L.) (Leervis or garrick). Laboratory studies on R.holubi were possible due to the fact that large numbers of this species could be caught in eastern Cape estuaries and transported to Grahamstown, where they could be maintained in captivity for up to four months in recirculating seawater aquaria. During the course of the study over 2000 fish were kept in captivity at different times for a variety of experiments. Another 2500 were preserved for gut analyses and lipid determinations, while over 5000 were captured, examined and released in the field.

Thesis (MPhil)--Stellenbosch University, 2015. / ENGLISH ABSTRACT: Emerging global trends towards sustainable development have placed emphasis on the need to create sustainable food value chains. Many food value chains are becoming weakened through their reliance on eco-systems that are deteriorating. Furthermore, while food systems are under threat, global food consumption is on the rise. The conundrum seems inescapable. Humanity’s food supply methods have moved on from hunter-gatherer characteristics apart from the exception of the fishing industry. The current generation may be the last to witness the wide-spread practice of fishing. Aquaculture, and in particular fish-farming, has begun to show much potential as a method of producing sustainable sources of protein. Whether this can be utilized in the South African context is a challenge that needs to be verified. This research, presented as two articles, explores the potential for the development of the fish-farming sector in South Africa, and recommends suitable species. Although there is some literature on how fish-farming may have a place in South Africa’s sustainability quest, it is scarce. This research aims to enhance the literature base on fish-farming in South Africa, as well as provide further evidence on what the true potential is for fish-farming in South Africa. This was done through a series of primary and secondary data collection methods that allow for a thorough analysis of fish-farming in South Africa and the species involved. The analysis revealed that the fish-farming sector and the cultivatable species in South Africa are met with an array of opportunities and challenges. Overcoming these challenges will open the doors to exploit the opportunities available. / AFRIKAANS OPSOMMING: Opkomende globale tendense weerspieël dat dit noodsaaklik is dat klem gelê moet word op volhoubare ontwikkeling en dat dit van uitterste belang is om volhoubare voedsel waardekettings te skep. Verskeie voedsel waardekettings raak verswak deur hul afhanklikheid van eko-stelsels wat vernietig word. Verder, terwyl voedsel stelsels bedreig word, is globale verbruik van voedsel besig om te verhoog. Dié raaisel lyk onvermydelik. Mensdom se huidige voedselvoorraad metodes het aansienlik ontwikkel van dié van die jagter-versamelaars, met die uitsondering van die visbedryf. Die huidige generasie mag die laaste wees, wat die wyd verspreide praktyk van visvang beoefen, om daarvan te getuig. Akwakultuur, in besonder vis-boerdery, het begin om potensiaal te wys as 'n volhoubare bron in die vervaardiging van proteïen. Of dit in die Suid-Afrikaanse konteks gebruik kan word, is 'n uitdaging wat geverifieer moet word. Hierdie navorsing, wat aangebied word as twee tydskrifartikels, ondersoek die potensiaal vir die ontwikkeling van vis-boerdery in Suid-Afrika, en beveel ook gepaste spesies aan. Alhoewel daar sommige artikels is oor hoe vis-boerdery kan in pas in Suid-Afrika se soeke na volhoubaarheid, is dit skaars te vinde. Die navorsing beoog om die literatuur basis van vis-boerdery in Suid-Afrika op te skerp, en ter selfde tyd verdere bewys te gee oor die ware potensiaal van vis-boerdery in Suid-Afrika. Dit was gedoen deur 'n reeks van primêre en sekondêre data-insameling metodes wat voorsiening maak vir 'n deeglike ontleding van visboerdery in Suid -Afrika en die spesies betrokke. Die ontleding het getoon dat die vis-boerdery bedryf en die aankweek spesies in Suid-Afrika verskeie geleenthede en uitdagings in die gesig staar. Oorwinning van hierdie uitdagings sal dit moontlik maak om die beskikbare geleenthede te ontgin.

The dusky kob, Argyrosomus japonicus, is a popular South African “line fish” whose stocks have dwindled to dangerously low levels of between 1% and 4.5% of pristine spawner biomass per recruit. A. japonicus stocks are currently managed by means of minimum size restrictions and daily bag limits, and as a result of the inability of these measures to facilitate the recovery of the species over a realistic time frame, the need for an alternative management plan has become apparent. Given the status of the stock and management regime, stock enhancement appears to be an appropriate option to be investigated. This study evaluates the feasibility of stock enhancement as a possible management tool to assist with the recovery of this important South African linefish species. By evaluating the genetic and ecological implications related to stock enhancement, identifying a suitable tagging method for post-release monitoring, and evaluating the economic feasibility of such a programme, any fatal flaws would become immediately apparent. This coupled with the required framework for the development of a management plan for stock enhancement of A. japonicus provides direction further research and actions required in order to utilise stock enhancement as a management tool. Due to the nature of stock enhancement, there are several ecological and genetic issues that arise from such a programme. These issues were reviewed and the issues that were relevant to stock enhancement of A. japonicus identified. Ecological concerns that arose included those of competition, disease and seed quality, while genetic issues were concerned mainly in the possible loss of genetic variability and consequent reduction in fitness of the stock. Fortunately the technology exists to evaluate the effects and likelihood of these problems occurring as well as to minimise the likelihood of them occurring. By taking a scientific approach to stock enhancement, hatchery management, and release strategies can be manipulated in such a way as to minimise any negative effects that may be caused. Both ecological and genetic effects of stocking indicate a need for post-release monitoring of stock enhancement programmes. Stock enhancement requires a post-release monitoring programme, which in turn relies on an ability to distinguish between hatchery reared and wild fish. A study was conducted to evaluate the suitability of coded wire tags (CWT), visual implant fluorescent elastomers (VIFE), and oxytetracycline (OTC) as a means of distinguishing between hatchery reared and wild A. japonicus, for the purpose of a post-release monitoring programme. OTC appeared to be the most suitable as it produced 100% retention over a five month period compared to 62% and 61% for VIFE and CWT respectively. OTC is therefore suggested as a tagging method for the purpose of post-release monitoring of the stock enhancement of A. japonicus. To evaluate a possible funding option for stock enhancement of A. japonicus in South Africa, a willingness-to-pay survey, based on a “user pays” approach using recreational fishing permits as a vehicle for payment, included 102 recreational anglers in the Plettenberg Bay area. The survey showed that generally anglers were willing to pay more than the current amount for the recreational fishing permit. This promising result, coupled with the fact that there are approximately 450 000 recreational anglers leads to the belief that there is potential for a substantial increase in the funds generated for the Marine Living Resources Fund through recreational anglers. Stock enhancement should not be ruled out on the basis of economic feasibility yet as there is potential for it to be sustained by the users of the resource. An A. japonicus juvenile production costing model was created taking into account setup and running costs of a hatchery for A. japonicus, based on known parameters from existing facilities, and adjusting them to meet the requirements of a stock enhancement facility. Estimates varied according to the number and size of fish for release (values which can only be decided upon after further research), with setup estimated to be between R 10 000 000 and R 30 000 000 and annual running costs between R 2 400 000 and R 6 700 000 annually. These figures were dependant on the size and number of fish being produced, with production ranging between 100 000 and 5 000 000 fish of between 50 mm and 150 mm, and a broodstock of 150 individuals. Given the need for alternative management of A. japonicus in South Africa and the lack of evidence to suggest that it is an unfeasible option, this project has found no reason why further investigation into the use of stock enhancement for the management of A. japonicus should not proceed further provided the fishery is shown to be recruit limited. The technology and ability to overcome possible ecological and genetic problems exists, a suitable means of tagging for post-release monitoring exists, as does a realistic funding option. There is a substantial amount of research that must be done prior to stocking, for which a base framework is provided.

Thesis (MPhil)--Stellenbosch University, 2015. / ENGLISH ABSTRACT: Stellenbosch University was approached to assist with developing a techno-financial model for an urban freshwater aquaculture system in Philippi, Cape Town. Rapidly growing urban areas are predominantly becoming concentrated zones for malnutrition and poverty which require attention. Having enough food to eat does not mean that a family is food secure, the problem is usually associated with the lack of access to nutritious food. Fish is seen as an extremely healthy food which has the potential to effectively support food security and alleviate malnutrition. Aquaculture is identified as a largely underdeveloped sector in South Africa. It is currently undergoing rapid transition, being promoted by government as an industry that has potential to develop and create jobs, provide food security and grow the South African economy. Aquaponics- a method to integrate aquaculture with growing crops in a symbiotic system is a highly resource efficient closed-integrated food producing technology which has the potential to benefit from South African biosecurity regulations and climate-geographic characteristics. It is viewed as an effective food production alternative to deal with the challenges of declining high quality freshwater resources and available arable land. Training and capacity building is important for the development of aquaponic technology. This study explores and identifies the advantages aquaponic technology development would have in South Africa. The study has reviewed and assessed the fundamental principles for aquaculture production and management required for aquaponic systems development and management. A practical case study identifies the daily challenges and design parameters of aquaponic systems. The study is concluded with a techno-financial project proposal which shows how aquaponic systems can be planned. / AFRIKAANSE OPSOMMING: Universiteit Stellenbosch was genader om 'n tegno-finansiele model to ontwikkel vir 'n stedelike akwakultuur plaas in Philippi, Kaapstad. The tempo waarteen die stedelike areas groei ontwikkel kommerwekkende uitdagings soos wanvoeding en armoede. In hierdie studie is vis geindentifiseer as 'n uiters voedsame aanvulling in die dieet van Suid Afrikaners. Akwakultuur is grootliks agter in terme van ontwikkeling. Dit word beskou as 'n sektor wat groot potensiaal inhou vir Suid Afrika se eknomiese groei, werkskepping en voedselsekuriteit. Akwaponika is die hersirkulerende integrasie van akwakultuur en hidroponika. Akwaponika hou groot voordele in terme van Suid Afrika se biosekuriteit regulasies and geografiese eienskappe en is 'n effektiewe manier om gebruikte akwakultuur te suiwer. Opleiding en beplanning word gesien as 'n fundamentele benadering tot suskesvolle akwaponika ontwikkeling. Hierdie studie bestudeer die Suid Afrikaanse omgewing en potensiaal vir akwaponika ontwikkeling. Die fundamentele beginsels van akwakultuur en hidroponika bestuur en produksie is saamgesit wat beskou word as die aanbevele manier om akwaponika te bestuur. 'n Praktiese gevallestudie toon die daaglikse uitdagings aan en gee raad oor daaglikse bestuur van akwaponika stelsels. Die studie word afgesluit met 'n tegno-finansiele model wat wys hoe om 'n akwaponika sisteem te beplan.

Thesis (MScAgric (Conservation Ecology and Entomology)--University of Stellenbosch, 2007. / Small farm dams (< 20 ha) in the Western Cape Province provide adequate water conditions for intensive cage production of rainbow trout (Oncorhynchus mykiss). A major environmental concern of cage aquaculture, however, is the high inputs of nutrients via commercial diets and the subsequent eutrophication of the water source. Eutrophication can result in the degradation of the general water quality (increasing pH levels, oxygen depletion, increased hydrogen sulphide and free ammonia) and shifts in the phytoplankton structure (increased biomass, single species dominance). Deterioration of water quality will affect the success of the fish farming enterprise as well as the performance of irrigation equipment by increasing the risk of clogging and corrosion. Water quality, phytoplankton and zooplankton compositions were monitored at four sites from June 2005 to November 2006 to determine the effects of cage culture on the farm dam environment, its associated biota as well as irrigation water quality. The distribution of nutrients, nitrogen and phosphorus, was mainly influenced by the stratification and mixing regime of the water bodies. Nutrient concentrations increased during the winter mixing period while in the summer months, they seem to settle to the lower part of the water column. Nutrient concentrations of production sites and reference sites were comparable except for the ammonia levels that were significantly higher at the production sites. Phytoplankton corresponded with nutrient availability resulting in high biomass during winter. In terms of biomass, phytoplankton was approximately two times more abundant in production sites compared to reference sites. Assemblage dominance by cyanophytes (Anabaena circinalis, Microcystis spp.) was found more often in production sites, while reference sites were dominated by dinophytes (Ceratium hirundinella, Peridinium spp.). Zooplankton biomass concurred with high phytoplankton biomass in winter. Zooplankton assemblages in production sites sustained much higher biomass. Effects of cage culture on irrigation water quality are evident from increased algal biomass and shifts in species composition. These results indicated that at its present production level, cage culture had impacts on the farm dam environment and irrigation water quality. The most significant evidence was given by increased plankton biomass and single species dominance in production sites. However, these findings can not solely be ascribed to the introduction of aquaculture as various other factors may also contribute to the water quality of these ecosystems.