Thesis (M.S.)--Joint Program in Oceanography (Massachusetts Institute of Technology, Dept. of Earth, Atmospheric, and Planetary Sciences; and the Woods Hole Oceanographic Institution), February 2001. / Includes bibliographical references (leaves 144-149). / A bi-weekly seasonal study was conducted in Ashumet Pond (Cape Cod, Massachusetts). The Redfield Ratio (106C:16N:1P) and alkaline phosphatase activity (APA) were utilized in tandem as nutrient deficiency indicators (NDIs) for phytoplankton. The study objective was to evaluate the limiting nutrient status of the pond throughout the growing season. The development of a high throughput method for fluorometrically measuring APA allowed for a large quantity of pond-water samples to be analyzed. The new method utilized a cytofluor, a fluorescence multi-well plate reader, which increased sample throughput by 75% compared to a standard filter fluorometer method. The detection limit, capability to measure APA at different time intervals, and performance at sea were tested. APA measurements made using the cytofluor were comparable to those made using a standard filter fluorometer, thus indicating that the cytofluor is a suitable and preferred replacement to the fluorometer for APA measurements. The presence of alkaline phosphatase, an inducible phospho-hydrolytic enzyme, is commonly used as an NDI diagnostic for phosphate limitation. A nutrient enrichment incubation re-affirmed the use of APA as a robust indicator of phosphate limitation in phytoplankton. APA data indicate that the system experienced episodic periods of phosphate-deficiency, implying that the limiting nutrient regime was not static, but was changeable throughout the growing season. Seasonal trends in dissolved N:P and particulate C:P ratios often contradict the APA results, however, suggesting that the Redfield Ratio is an unreliable indicator of the overall nutrient limitation regime of the pond. The observed discrepancies between C:N:P and APA can be reconciled by taking into account seasonal changes in species composition, which played an important role in driving seasonal APA trends. / by Christie Lynn Haupert. / M.S.