Thesis (MSc Food Sc)--Stellenbosch University, 2015. / ENGLISH ABSTRACT: Many South African farmers are forced to use water from nearby rivers for crop irrigation, since it is the most affordable and sometimes only source of water available to them. During this research project, a baseline study was performed on a farm irrigating fresh produce with water obtained from the Eerste River. The baseline study was done over a five month period, at six preselected sampling points, to determine the microbial and physico-chemical parameters of the water so a baseline could be established to compare the results to when the ultraviolet (UV) apparatus was installed (February 2013). Aerobic colony count (ACC), total coliforms (TC) and Escherichia coli (E. coli) were tested for during the microbiological study, while the physico-chemical analysis comprised of temperature, pH, conductivity, chemical oxygen demand (COD), alkalinity and total soluble solids (TSS). The UV treatment study was also performed over a five month timeline, at eight different sampling points (original six sampling points, with additional sampling points before and after UV). The same microbiological tests were performed during the UV treatment study, but turbidity and percentage ultraviolet transmittance (% UVT) were performed additionally during physico-chemical analysis. During the baseline study ACC, TC and E. coli counts as high as 9 600 cfu.mL-1, 13 799 MPN.100 mL-1 and 2 098 MPN.100 mL-1 were isolated at the river (Sampling Point 1), respectively. While performing the UV treatment study ACC, TC and E. coli counts as high as 142 000 cfu.mL-1, 241 960 MPN.100 mL-1 and 6 867 MPN.100 mL-1 were isolated at the river, respectively. As a result it was concluded that the Eerste River was mostly unsuitable for irrigation of fresh produce that are consumed raw. The higher counts in the river, during the UV treatment study might be attributed to the increase in rainfall that occurred in the sampling months (March to July 2013). The counts as measured at the point of irrigation are considered of greater importance, since the counts present in the river might still decrease to below the guideline levels after passing through sand filters and the addition of hydrogen peroxide (current mode of treatment) or after passing through the UV in the UV treatment study. The ACC, TC and E. coli counts during the baseline study were as high as 8 800 cfu.mL-1, 24 196 MPN.100 mL-1 and 85 MPN.100 mL-1 at the point of irrigation (Sampling Point 6), respectively. After hydrogen peroxide addition average logreductions ranging between 0.65 and 1.13 were seen, but reduction was never constant. The counts at the point of irrigation remained more or less constant compared to the river due to contamination that occurred at the sand filters, making the water unsuitable for irrigation of fresh produce in terms of ACC and TC counts. In the UV treatment study ACC, TC and E. coli counts were as high as 35 000 cfu.mL-1, 10 462 MPN.100 mL-1 and 63 MPN.100 mL-1 at the point of irrigation (Sampling Point 8), respectively. Average log-reductions in the range of 0.90 to 1.25 were achieved, but it was inconsistent. After treatment with chlorine and re-sanding of the sand filters, no further contamination occurred and counts decreased to below guideline limits, making the water safe for irrigational use in terms of all of the microbiological parameters. Not only is UV treatment more effective in reducing microbiological counts than H2O2, it is also relatively less expensive in the long term. Hydrogen peroxide treatment of water amounts to a very high capital expense every month, whereas UV may seem expensive when starting up, but the monthly operating cost thereafter is marginally less than for H2O2. It is of great importance to farmers to find a treatment that would reduce the counts in the river water to below the guideline limits required for safe irrigation since pathogens can be carried over from water onto fresh produce, resulting in an increase in produce-associated foodborne outbreaks and loss of consumer trust. / AFRIKAANSE OPSOMMING: Menigte Suid-Afrikaners is afhanklik van nabygeleë riviere om hulle oeste te besproei aangesien dit meestal die mees bekostigbare en soms enigste bron tot hul beskikking is. Tydens hierdie projek is ‘n grondslag sowel as ‘n UV behandelingsmetode studie uitgevoer op ‘n plaas wat vars vrugte en groente besproei met water water wat hul vanuit die Eersterivier verkry. Die grondslagstudie is oor ‘n tydperk van vyf maande uitgevoer by ses voorafgekose punte. Dit is gedoen om die mikrobiologiese sowel as chemiese parameters van die water te bepaal sodat ‘n grondslag beskikbaar kon wees om met resultate te vergelyk wat met behulp van die ultravioletmasjien verkry is (in Februarie 2013 geïnstalleer). Tydens die mikrobiologiese studie is daar vir aerobiese koliform tellings (ACC), totale koliforme (TC) en Escherichia coli (E. coli) getoets. Tydens die chemiese analise is temperatuur, pH, konduktiwiteit, chemiese suurstof benodiging, alkaliniteit en totale oplosbaie vastestowwe in die water getoets. Die UV behandelingsmetode studie is ook oor ‘n tydperk van vyf maande uitgevoer, met twee addisionale toetspunte by. Presies dieselfde mikrobiologiese analises as wat tydens die grondslag studie uitgevoer is, is tydens die UV behandelingsmetode studie uitgevoer, maar vir die chemiese analise het turbiditeit en persentasie ultraviolet transmissie van die water bygekom. Gedurende die grondslag studie was ACC, TC and E. coli tellings so hoog as 9 600 cfu.mL-1, 13 799 MPN.100 mL-1 en 2 098 MPN.100 mL-1 onderskeidelik uit die rivier geïsoleer (Punt 1). Tydens die UV behandelingsmetode studie was ACC, TC en E. coli tellings so hoog as 142 000 cfu.mL-1, 241 960 MPN.100 mL-1 en 6 867 MPN.100 mL-1 onderskeidelik by die rivier geïsoleer. Gevolglik is daar afgelei dat die Eersterivier se water meestal ongeskik is om te gebruik vir die besproeiing van vars groente en vrugte wat rou geëet word sonder dat enige verdere behandeling plaasvind. Die hoër tellings wat tydens die UV behandelingsmetode in die rivier sigbaar was kan hoofsaaklik toegeskryf word aan die toename in reënval in daardie tyd (Maart tot Julie 2013). Tellings soos gemeet by die punt van besproeiing is wel van groter belang as die wat aangeteken is by die rivier; aangesien die tellings wat in die rivier aangeteken is steeds kan afneem tot onder aanvaarbare hoeveelhede soos in die standaarde uiteengesit, want die water moet steeds deur sandfilters beweeg en word ook huidiglik deur waterstofperoksied behandel tydens die die grondslagstudie of beweeg deur die UV apparaat in die UV behandelingsmetode studie. Die ACC, TC en E. coli tellings soos gemeet by die besproeiingspunt (Punt 6) was so hoog as 8 800 cfu.mL-1, 24 196 MPN.100 mL-1 en 85 MPN.100 mL-1, onderskeidelik. Na waterstofperoksied byvoeging was die gemiddelde log-reduksies sigbaar, tussen 065 en 1.13, maar afnames was nooit konstant nie. Die tellings by die punt van besproeiing het ongeveer konstant gebly in vergelyking met die tellings wat by die rivier aangeteken is; moontlik as gevolg van die hoë kontaminasie vlakke in die sandfilters. Kontaminasie van sandfilters het veroorsaak dat die water ongeskik was vir die gebruik van besproeiing van vars groente as gevolg van die hoë ACC en TC vlakke. Tydens die UV behandelingsmetode studie is ACC, TC en E. coli tellings so hoog as 35 000 cfu.mL-1, 10 462 MPN.100 mL-1 en 63 MPN.100 mL-1, onderskeidelik aangeteken (Punt 8). Gemiddelde log-reduksies tussen 0.90 tot 1.25 was verkry, maar behandeling en afnames in tellings was nie konstant nie. Nadat die sandfilters met chloor behandel is en die sand daarin vervang is, het geen verdere kontaminasie by die punt voorgekom nie. Nadat al die voorafgenoemde behandelings afgehandel is, het die tellings tot laer as die van die standaarde gedaal en dus was die water nou veilig om te gebruik vir besproeiingsdoeleindes in terme van die mikrobiologiese parameters. Die UV behandelingsmetode is nie net meer effektief in die verlaging van mikrobiologiesese tellings as waterstofperoksied nie, dis ook heelwat goedkoper in die langtermyn. Waterstofperoksied behandeling van water lei tot ‘n baie hoë kapitale onkoste per maand, terwyl UV baie duur mag voorkom in die beginfase, maar die maandelikse kostes is aansienlik laer as die van waterstofperoksied en maak sodoende op daarvoor. Dit is van uiterste belang vir boere om ‘n water behandelingsmetode te vind wat die hoë tellings in die rivier sal afbring tot laer as Suid-Afrikaanse en Kanadese riglyne; aangesien patogene oorgedra kan word van vars vrugte en groente. Laasgenoemde kan tot ‘n drastiese toename in vars voedsel geassosieerde siektes en gevolglik ‘n afname in die vertroue wat ‘n kliënt in ‘n produk plaas, lei.

Thesis (MSc Food Sc)--Stellenbosch University, 2015. / ENGLISH ABSTRACT: Fresh produce irrigation water from Western Cape Rivers carries faecal coliforms (FC) (Escherichia coli) at concentrations which often exceed the suggested limit of 1 000 FC per 100 mL and presents a health risk to consumers. On-farm ultraviolet (UV) irradiation presents several advantages for water disinfection but is an uncommon practice in South Africa. The aim of this study was to investigate the use of UV irradiation for river water disinfection prior to irrigation. Escherichia coli (E. coli) strains were exposed to low-pressure (LP) UV (4 mJ.cm-2) and UV/Hydrogen peroxide (H2O2) (4 mJ.cm-2/20 mg.L-1) treatments in Sterile Saline Solution (SSS). Strain variation in reductions was observed and ranged from 1.58 to 3.68 and 1.34 to 3.60 log for the UV and UV/H2O2 treatments, respectively. The UV/H2O2 treatment (4 mJ.cm-2/20 mg.L-1) was more effective, compared to UV singly, against some of the E. coli strains. Selected strains showed increased sensitivity at higher UV doses (8, 10 and 13 mJ.cm-2) and H2O2 concentrations (100 and 200 mg.L-1 with 4 mJ.cm-2) but a 3 log target reduction was not always reached. For all UV and UV/H2O2 treatments maximum resistance was shown by an environmental strain. Reference strains should, therefore, not be used for the optimisation of UV based disinfection parameters. At 10 mJ.cm-2 an American Type Culture Collection (ATCC) reference strain and an environmental strain (ATCC 25922 and F11.2) were both significantly less inactivated in sterilised river water compared to SSS. Enhanced water quality allowed for improved inactivation of the ATCC strain. Also, the efficiency of LP UV (5, 7 and 10 mJ.cm-2) and medium-pressure (MP) UV (13, 17 and 24 mJ.cm-2) radiation was investigated using water from the Plankenburg River. Water was sampled and treated on three respective days (Trials 1 to 3). Physico-chemical and microbiological water quality was always poor. The FC concentration reached a maximum of 6.41 log cfu.100 mL-1 while UV transmission was always below 38%. For LP and MP UV irradiation increased doses resulted in increased disinfection but a 3 log reduction of FC was only attained when MP UV light was used in Trial 1. Disinfection efficiency was dependent on water quality and on the characteristics of the microbial population in the water. Since FC were never reduced to below 3 log cfu.100 mL-1, the water did not adhere to guidelines for produce irrigation. Photo-repair following irradiation was investigated in river water using MP UV doses of 13 and 24 mJ.cm-2 and 3.5 kLux reactivating light, initially. Ultraviolet transmission was close to 50% and total coliform (TC) reduction exceeded 3 log, even at 13 mJ.cm-2. However, TC were reactivated from below 1 000 cfu.100.mL-1 to 3.93 and 4.41 log cfu.100 mL-1 for the 13 and 24 mJ.cm-2 treatments, respectively. A higher MP dose (40 mJ.cm-2) and a different treatment regime (2 x 20 mJ.cm-2) inhibited photo-repair (compared to 13 and 24 mJ.cm-2) but TC were always recovered to a final concentration surpassing 3 log cfu.100 mL-1, even under lower light intensities (1.0 to 2.0 kLux). In the current study UV irradiation did not produce water of acceptable standards for produce irrigation, mainly as a result of extremely poor water quality. However, on farm-scale, UV efficiency could be enhanced by improving water quality before irradiation. Also, stronger lamps that deliver higher UV doses may result in adequate disinfection, irrespective of water quality. Higher UV doses and the use of combination treatments (such as UV/Chlorine and UV/Peracetic acid) should be further investigated also to determine its disinfection efficiency and possible capability to inhibit post-disinfection repair. / AFRIKAANSE OPSOMMING: Varsproduk besproeiingswater vanuit Wes-Kaapse riviere bevat fekale kolivorme (FK) (Escherichia coli) in konsentrasies wat dikwels die voorgestelde limiet van 1 000 FK per 100 mL oorskry en hou `n gesondheidsrisiko vir verbruikers in. Plaasvlak ultraviolet (UV) bestraling bied verskeie voordele met verwysing na water dekontaminering, maar word selde aangewend in Suid-Afrika. Die doel van hierdie studie was om die gebruik van UV bestraling vir die dekontaminering van rivierwater, voor besproeiing, te ondersoek. Escherichia coli (E. coli) isolate is blootgestel aan lae-druk (LD) UV (4 mJ.cm-2) en UV/Waterstofperoksied (H2O2) (4 mJ.cm-2/20 mg.L-1) behandelings in Steriele Sout Oplossing (SSO). Isolaat variasie in reduksies is waargeneem en het gewissel tussen 1.58 tot 3.68 en 1.34 tot 3.60 log vir die UV en UV/H2O2 behandelings, onderskeidelik. In vergelyking met UV bestraling alleen was die UV/H2O2 behandeling (4 mJ.cm-2/20 mg.L-1) meer effektief teen sommige E. coli isolate. Geselekteerde isolate was meer sensitief tot hoër UV dosisse (8, 10 en 13 mJ.cm-2) en H2O2 konsentrasies (100 en 200 mg.L-1 met 4 mJ.cm-2), maar `n 3 log teikenreduksie was nie altyd haalbaar nie. Vir alle UV en UV/H2O2 behandlinge was die meeste weerstand deur `n omgewingsisolaat gebied. Verwysingsisolate behoort daarom nie aangewend te word vir die optimisering van UV-gebaseerde behandelingsparameters nie. By 10 mJ.cm-2 was beide `n ATCC verwysingsisolaat en `n omgewingsisolaat (ATCC 25922 en F11.2) betekenisvol minder gedeaktiveer in rivierwater as in SSO. Verbeterde waterkwaliteit het verhoogde inaktivering van die ATCC isolaat toegelaat. Die doeltreffendheid van LD UV (5, 7 en 10 mJ.cm-2) en medium-druk (MD) UV (13, 17 en 24 mJ.cm-2) bestraling is ook ondersoek deur watermonsters vanuit die Plankenburg Rivier te gebruik. Watermonsters was getrek en behandel op drie verskillende dae (Proewe 1 tot 3). Fisies-chemiese en mikrobiologiese kwaliteit van die water was deurentyd swak. Die FK konsentrasie het `n maksimum van 6.41 log kve.100 mL-1 bereik terwyl UV transmissie altyd laer as 38% was. Vir beide LD en MD UV bestraling het verhoogde dosisse gelei tot verbeterde dekontaminering, maar `n 3 log reduksie is slegs bereik toe MD UV lig gebruik is in Proef 1. Die effektiwiteit van die behandelings was afhanklik van waterkwaliteit en die eienskappe van die mikrobiese populasie in die water. Aangesien FK nooit tot onder 3 log kve.100 mL-1 verminder is nie het die water nie voldoen aan riglyne vir varsproduk-besproeiing nie. Fotoherstel na bestraling was ondersoek in rivierwater deur aanvanklik gebruik te maak van MD UV dosisse van 13 en 24 mJ.cm-2 en 3.5 kLux heraktiverende lig. Ultraviolettransmissie het byna 50% bereik en reduksie van totale kolivorme (TK) het 3 log oorskry, selfs by 13 mJ.cm-2. Totale kolivorme was egter geheraktiveer van onder 1 000 kve.100.mL-1 tot 3.93 en 4.41 log kve.100 mL-1 vir die 13 en 24 mJ.cm-2 behandelings, onderskeidelik. In vergelyking met 13 en 24 mJ.cm-2 het `n hoër MD dosis (40 mJ.cm-2) en `n veranderde bestralingstegniek (2 x 20 mJ.cm-2) fotoherstel onderdruk, maar TK was in elke geval geheraktiveer tot `n finale konsentrasie hoër as 3 log kve.100 mL-1, selfs onder laer intensiteit lig (1.0 tot 2.0 kLux). In hierdie ondersoek het UV bestraling nie water van aanvaarbare standaarde vir varsproduk besproeiing gelewer nie, hoofsaaklik as gevolg van swak waterkwaliteit. Nietemin, op plaasvlak mag die effektiwiteit van UV bestraling verhoog word deur waterkwaliteit voor bestraling te verbeter. Die gebruik van sterker lampe, om hoër UV dosisse te produseer, mag verder bydra tot voldoende dekontaminasie, ongeag van waterkwaliteit. Hoër UV dosisse en die gebruik van kombinasie behandelinge (soos UV/Chloor en UV/Perasynsuur) moet ook verder ondersoek word om die dekontaminasie effektiwiteit, en vermoë daarvan om heraktivering na dekontaminering te onderdruk, vas te stel.