Abstract Alternative splicing provides a versatile mechanism by which cells can generate proteins with different or even antagonistic properties. Herein we describe a novel splice variant of the hypoxia-inducible death gene Bnip3. Sequence analysis of the new Bnip3 protein revealed an N-terminus that was identical to Bnip3 but contained an Endoplasmic reticulum (ER) retention motif within the C-terminus, therefore we designated the new Bnip3 isoform NIPLET for (Nip-Like ER Target). While Bnip3 was predominately localized to mitochondria and promoted mitochondrial perturbations and cell death, NIPLET was preferentially localized to the ER and opposed the cytotoxic actions of Bnip3. Interestingly, NIPLET suppressed mitochondrial injury from Bnip3 activation and mitochondrial permeability transition pore opening by a mechanism dependent upon the dynamin motor protein Mitofusin-2 (MFN2). Notably, mutations of NIPLET within the critical ER retention motif rendered NIPLET defective for interacting with MFN2 and suppressed necrosis induced by Bnip3 or hypoxia. Hence, our findings reveal a novel signaling pathway that functionally couples ER and mitochondria for cell survival to a mechanism that is mutually dependent and obligatorily linked to a novel BNIP3 protein in cardiac myocytes. / May 2016

Mitofusin 1 and 2 are outer-mitochondrial membrane proteins that have been shown to be involved in fusion. Mitofusin 2 has also been associated with apoptosis and development. When Mfn1 and Mfn2 were each conditionally knocked out from the cerebellum, Purkinje cells in Mfn2 deficient cerebellum during development had undergone neurodegeneration. Mutations in Mfn2 have also been associated with the Charcot Marie Tooth Type 2A (CMT2A). We want to asses the effect Mfn2 and Mfn1 might have on the development of other regions of the brain such as the telencephalon. We generated Mfn1 and Mfn2 conditional knockouts in the telencephalon by crossing them with Foxg1 Cre - a cre expressed in the telencephalon. We found that Mfn1 deficient mice have lost their corpus callosum at the midline, but survive over 6 months with a decrease in progenitor cells postnatally. Mfn2 deficient mice die between P9 and P12 with a decrease in progenitor cells postnatally and a decrease in number of neurons in the cortex. Therefore, our results suggest that Mfn1 and Mfn2 play a significant role in the development of the telencephalon.

Mitofusin 1 and 2 are outer-mitochondrial membrane proteins that have been shown to be involved in fusion. Mitofusin 2 has also been associated with apoptosis and development. When Mfn1 and Mfn2 were each conditionally knocked out from the cerebellum, Purkinje cells in Mfn2 deficient cerebellum during development had undergone neurodegeneration. Mutations in Mfn2 have also been associated with the Charcot Marie Tooth Type 2A (CMT2A). We want to asses the effect Mfn2 and Mfn1 might have on the development of other regions of the brain such as the telencephalon. We generated Mfn1 and Mfn2 conditional knockouts in the telencephalon by crossing them with Foxg1 Cre - a cre expressed in the telencephalon. We found that Mfn1 deficient mice have lost their corpus callosum at the midline, but survive over 6 months with a decrease in progenitor cells postnatally. Mfn2 deficient mice die between P9 and P12 with a decrease in progenitor cells postnatally and a decrease in number of neurons in the cortex. Therefore, our results suggest that Mfn1 and Mfn2 play a significant role in the development of the telencephalon.

Mitofusin 1 and 2 are outer-mitochondrial membrane proteins that have been shown to be involved in fusion. Mitofusin 2 has also been associated with apoptosis and development. When Mfn1 and Mfn2 were each conditionally knocked out from the cerebellum, Purkinje cells in Mfn2 deficient cerebellum during development had undergone neurodegeneration. Mutations in Mfn2 have also been associated with the Charcot Marie Tooth Type 2A (CMT2A). We want to asses the effect Mfn2 and Mfn1 might have on the development of other regions of the brain such as the telencephalon. We generated Mfn1 and Mfn2 conditional knockouts in the telencephalon by crossing them with Foxg1 Cre - a cre expressed in the telencephalon. We found that Mfn1 deficient mice have lost their corpus callosum at the midline, but survive over 6 months with a decrease in progenitor cells postnatally. Mfn2 deficient mice die between P9 and P12 with a decrease in progenitor cells postnatally and a decrease in number of neurons in the cortex. Therefore, our results suggest that Mfn1 and Mfn2 play a significant role in the development of the telencephalon.

Mitofusin 1 and 2 are outer-mitochondrial membrane proteins that have been shown to be involved in fusion. Mitofusin 2 has also been associated with apoptosis and development. When Mfn1 and Mfn2 were each conditionally knocked out from the cerebellum, Purkinje cells in Mfn2 deficient cerebellum during development had undergone neurodegeneration. Mutations in Mfn2 have also been associated with the Charcot Marie Tooth Type 2A (CMT2A). We want to asses the effect Mfn2 and Mfn1 might have on the development of other regions of the brain such as the telencephalon. We generated Mfn1 and Mfn2 conditional knockouts in the telencephalon by crossing them with Foxg1 Cre - a cre expressed in the telencephalon. We found that Mfn1 deficient mice have lost their corpus callosum at the midline, but survive over 6 months with a decrease in progenitor cells postnatally. Mfn2 deficient mice die between P9 and P12 with a decrease in progenitor cells postnatally and a decrease in number of neurons in the cortex. Therefore, our results suggest that Mfn1 and Mfn2 play a significant role in the development of the telencephalon.

<p>Homeostatic maintenance of cellular mitochondria requires a dynamic balance between fission and fusion, and disruptions in this balance have been implicated in multiple pathological conditions, including Charcot-Marie-Tooth, Parkinson's, and Alzheimer's diseases. Whereas deregulated fission and fusion can be detrimental to health and survival, controlled changes in morphology are important for processes like cellular division and apoptosis. Specifically, regulated mitochondrial fission occurs closely with cytochrome c release during apoptosis and upon entry into mitosis during the cell cycle. Using cell culture-based assays, microscopy, and fly genetics, we examine how changes in the mitochondrial network are mediated at the molecular level during apoptosis and the cell cycle. </p> <p>First, we report that the fly protein Reaper induces mitochondrial fragmentation in mammalian cells, likely through inhibition of the mitochondrial fusion protein Mfn2. Reaper colocalizes with and binds to Mfn2 and its fly orthologue dMFN, and the colocalization of the two proteins is necessary for Reaper-induced mitochondrial fission. Moreover, the overexpression of dMFN inhibits Reaper-induced killing both in vitro and in vivo.</p> <p>Our data and work in a number of experimental systems demonstrate a requirement for mitochondrial fragmentation during apoptosis that is conserved from worms to flies to mammals. Our findings indicate that Reaper may function to inactivate mitochondrial metabolic function and/or to facilitate mitochondrial elimination during apoptosis. </p> <p>Secondly, we characterize Drp1 degradation by the APC/C during mitotic exit and interphase. We provide evidence that APC/CCdh1-mediated degradation of Drp1 underlies both the morphological changes that occur during progression through the cell cycle and changes in mitochondrial metabolism during interphase. Inhibition of Cdh1-mediated Drp1 ubiquitylation and proteasomal degradation during interphase prevents the normal regrowth of mitochondrial networks after mitosis, prevents cyclin E accumulation, and alters the profile of lipid-derived metabolites. Our findings describe a novel role for APC/CCdh1-mediated Drp1 degradation in cell cycle-dependent changes in mitochondrial morphology and metabolic function and suggest that the APC/CCdh1complex may regulate the distinct bioenergetic needs of a growing cell during synthetic phases of the cell cycle.</p> / Dissertation

Les jeunes oiseaux exposés au froid assurent leur homéothermie en stimulant les oxydations mitochondriales dans les muscles squelettiques. L’exposition prolongée au froid accroit les capacités de thermogenèse musculaire grâce à une plasticité bioénergétique mitochondriale dont le contrôle reste hypothétique. Chez les mammifères, des protéines de fusion (les mitofusines (Mfns) et OPA1(OPtic Atrophy 1)) participent au remaniement des réseaux dynamiques mitochondriaux dans de multiples types cellulaires. Le but de ce travail de thèse était de caractériser l’expression d’homologues aviaires des protéines de fusion mammaliennes et d’étudier leurs variations d’expression lors de la mise en place des processus bioénergétiques chez l’oiseau en croissance, lors d’une exposition aiguë ou prolongée au froid ou lors de challenges nutritionnels ou endocrines.Sur le plan méthodologique, une approche intégrative a été utilisée de l’animal entier (calorimétrie indirecte) à l’expression protéique (western blot) ou transcriptionnelle (RT-PCR) en passant par des mesures de la fonctionnalité bioénergétique sur des fibres musculaires perméabilisées et mitochondries isolées. Deux modèles animaux ont été utilisés, une espèce naturellement adaptée aux conditions extrêmes de l’Antarctique, le manchot Adélie (Pygoscelisadeliae), et un modèle de laboratoire, le canard de Barbarie (Cairina moschata). Nos résultats ont permis de caractériser chez l’oiseau l’expression de protéines de fusion (Mfn2, OPA1) immunoréactives homologues à celles des mammifères. Le séquençage d’une partie de la séquence codante des gènes codant les Mfns a montré une bonne similitude entre les espècesd’oiseaux et les mammifères. Chez le manchot, l’abondance relative de ces protéines dans lesmitochondries musculaires variait avec la croissance et l’exposition thermique en corrélation positiveavec les capacités bioénergétiques musculaires. Chez le canard, l’activité respiratoire et l’abondance relative de ces protéines étaient également corrélées suite à un jeûne de 60h ou, bien que dans une moindre mesure, après altération pharmacologique du statut thyroïdien.Ces résultats montrent pour la première fois chez l’oiseau l’expression de protéines homologues aux protéines de fusion des mammifères. L’association entre les variations d’expression de ces protéines et les modifications bioénergétiques du muscle squelettique indiquent qu’elles pourraient contribuer à la plasticité bioénergétique observée chez l’oiseau en croissance. Ces résultats suggèrent que des modifications potentielles de l’organisation des réseaux mitochondriaux musculaires pourraient contribuer aux réponses adaptatives des organismes face aux contraintes environnementales. / Cold-exposed young birds maintain their homeothermy by stimulating mitochondrial oxidations in skeletal muscle. Prolonged cold exposure enhances muscle thermogenic capacities through mitochondrial bioenergetics plasticity which control still remains hypothetical. In mammals, fusion proteins (mitofusins (Mfns) and OPA1 (Optic Atrophy 1)) contribute to the permanent and dynamic changes in mitochondrial networks in multiple cell types. The aim of our work was to characterize the expression of avian homologues of mammalian fusion proteins and to study the variations of their expression during the establishment of bioenergetics processes in growing birds, during an acute or a prolonged cold exposure and finally during nutritional or endocrine challenges. Methodologically, an integrative approach has been used from whole animal (indirect calorimetry) to protein (western-blot) or gene (RT-PCR) expression through measurements of the bioenergetics functionality of permeabilized muscle fibers and isolated mitochondria. Two animal models were used, a species naturally adapted to Antarctica harsh conditions, the Adélie penguin (Pygoscelis adeliae), and a laboratory model, the Muscovy duck (Cairina moschata).Our results allowed us to characterize, in birds, the expression of immunoreactive fusion proteins (Mfn2, OPA1) which were homologous to those of mammals. The sequencing of a part of the coding sequence of Mfns genes showed a great similitude between avian and mammalian species. In penguins, the relative abundance of these proteins in muscle mitochondria was modified by growth in the cold and was positively correlated with muscle bioenergetics capacities. In ducks, the respiratory activity and the relative abundance of these proteins were also correlated after a 60h fasting period or,though a lesser extent, after a pharmacological alteration of thyroid status. Our results show, for the first time in birds, the expression of proteins homologous to mammalian fusion proteins. The association between the changes in expression of these proteins and the bioenergetics modifications in skeletal muscle indicates that these proteins could contribute to thebioenergetics plasticity observed in growing chicks. These results suggest that potential modifications of the muscle mitochondrial network organization could play a role in the adaptive responses of organisms to the environmental constraints.

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