Lake sediments contain the remains of midge communities that may be used as biological proxies for inferring past environmental changes. Freshwater midges, including Chironomidae and Chaoboridae, from two alpine tarns (Pyramid Lake and Bullwinkle Lake) in the Cassiar Mountains of northern British Columbia were used to estimate Holocene palaeotemperature changes, and more specifically, to test for the presence of the Milankovitch thermal maximum, an early Holocene warm interval coinciding with peak Holocene summer solar insolation. Mean July air temperatures were reconstructed using midge-inference models developed via weighted averaging-partial least squares (WA-PLS) regression. Cold-tolerant midge taxa dominate the stratigraphies from both Pyramid and Bullwinkle Lakes; however, warm-adapted species are more common in Bullwinkle Lake. Early Holocene warming is apparent at both lakes, however it is unclear whether this is indicative of the Milankovitch thermal maximum. A decrease in temperature occurs from 8,700-7,900 cal. yr BP at Pyramid Lake, around the same time that the 8,200 cal. yr BP cooling event occurred in the northern hemisphere. During the middle Holocene, records from Pyramid Lake indicate an overall decrease in temperature, with a short period of warmer temperatures that peak at 5,100 cal. yr BP. Temperatures fluctuate little during this time at Bullwinkle Lake. A short warming phase is apparent at both lakes during the late Holocene. July temperatures are highest at 2,000 cal. yr BP (10.5°C) in Pyramid Lake and at 1,200 cal. yr BP (13°C) in Bullwinkle Lake. Thereafter, temperatures return to what they were before the warming occurred, and at Bullwinkle Lake, vary little throughout the remainder of the Holocene.

The objectives of this study were: 1) to compare and contrast the effects of variations in natural densities of two common freshwater predators of crustacean zooplankton, Chaoborus spp. and Mysis relicta; and 2) to determine whether the combined impacts of these predators together differed from their effects when alone. In deep (>10m) mesocosms, additions of Chaoborus and Mysis at natural densities did not result in large changes in zooplankton abundances, lengths, or biomass. Significant decreases in abundance were observed only for Bosmina longirostris and Daphnia spp. In small (~20L) enclosures, higher predator densities caused zooplankton declines over three days. Strong interactive effects between Chaoborus and Mysis were not detected in either the large or small enclosures. This suggests that the combined effects of these two predators can be predicted from their effects determined in isolation.

The objectives of this study were: 1) to compare and contrast the effects of variations in natural densities of two common freshwater predators of crustacean zooplankton, Chaoborus spp. and Mysis relicta; and 2) to determine whether the combined impacts of these predators together differed from their effects when alone. In deep (>10m) mesocosms, additions of Chaoborus and Mysis at natural densities did not result in large changes in zooplankton abundances, lengths, or biomass. Significant decreases in abundance were observed only for Bosmina longirostris and Daphnia spp. In small (~20L) enclosures, higher predator densities caused zooplankton declines over three days. Strong interactive effects between Chaoborus and Mysis were not detected in either the large or small enclosures. This suggests that the combined effects of these two predators can be predicted from their effects determined in isolation.

Lake sediments contain the remains of midge communities that may be used as biological proxies for inferring past environmental changes. Freshwater midges, including Chironomidae and Chaoboridae, from two alpine tarns (Pyramid Lake and Bullwinkle Lake) in the Cassiar Mountains of northern British Columbia were used to estimate Holocene palaeotemperature changes, and more specifically, to test for the presence of the Milankovitch thermal maximum, an early Holocene warm interval coinciding with peak Holocene summer solar insolation. Mean July air temperatures were reconstructed using midge-inference models developed via weighted averaging-partial least squares (WA-PLS) regression. Cold-tolerant midge taxa dominate the stratigraphies from both Pyramid and Bullwinkle Lakes; however, warm-adapted species are more common in Bullwinkle Lake. Early Holocene warming is apparent at both lakes, however it is unclear whether this is indicative of the Milankovitch thermal maximum. A decrease in temperature occurs from 8,700-7,900 cal. yr BP at Pyramid Lake, around the same time that the 8,200 cal. yr BP cooling event occurred in the northern hemisphere. During the middle Holocene, records from Pyramid Lake indicate an overall decrease in temperature, with a short period of warmer temperatures that peak at 5,100 cal. yr BP. Temperatures fluctuate little during this time at Bullwinkle Lake. A short warming phase is apparent at both lakes during the late Holocene. July temperatures are highest at 2,000 cal. yr BP (10.5°C) in Pyramid Lake and at 1,200 cal. yr BP (13°C) in Bullwinkle Lake. Thereafter, temperatures return to what they were before the warming occurred, and at Bullwinkle Lake, vary little throughout the remainder of the Holocene. / Irving K. Barber School of Arts and Sciences (Okanagan) / Earth and Environmental Sciences, Department of (Okanagan) / Graduate

Wetland resources in South Florida are regulated at three redundant jurisdictional levels: local or municipal regulations set forth by many independent jurisdictions, State regulations derived directly from Florida Statutes, and Federal regulations promulgated primarily under the Clean Water Act. All three levels of government can have jurisdiction over projects that affect regulated wetland resources, yet inconsistent policies and standards remain and continue to confound regulators despite decades of intensive coordination efforts and a rapidly growing scientific research base. The size of a wetland mitigation area is of primary consideration when evaluating its perceived ecological value, although wetland mitigation areas constructed in developed areas are typically isolated and generally make use of similar designs regardless of wetland size. The Chironomidae (Order: Diptera) are the most diverse and abundant faunal taxon in all healthy freshwater bodies and are generally considered to be a reliable and effective ecological indicator. I conducted a preliminary comparison of chironomid communities between a suite of natural and artificial wetlands, and also evaluated the effect of wetland size on the community structure of the insect family Chironomidae. Using the Chironomid Pupal Exuviae Technique (CPET), collections of chironomid exuviae from a total of seven natural and artificial mitigation wetlands were compared across site groups and also correlated to recorded environmental conditions at each study site. Chironomid species assemblages at nearly all sites were dominated by Parakiefferiella coronata, comprising nearly 36% of all collected exuviae. Species assemblages from mitigation wetlands exhibited strong similarity to the aggregate species assemblage from all sites. A greater abundance of exuviae was collected from artificial sites than from natural sites, and species assemblages collected from natural sites were dissimilar from those collected from artificial sites. No statistically significant differences in community structure were detected between larger and smaller wetlands. Environmental site conditions between natural and mitigation sites generally varied greatest in conductivity and pH. No significant gradient was identified in environmental conditions or chironomid community structure across wetlands of different size. A minor seasonal gradient in TP concentrations was observed and site S6 was the most enriched site included in this study while site S1 exhibited high conductivity for the duration of the project. Differences between chironomid species assemblages collected from natural and artificial communities may be explained by the relatively static topography, more consistent substrate composition, and less diverse hydrophyte communities present in the natural sites which have generally reached a greater state of homeostasis. However, statistical tests generally support the null hypothesis. No statistically significant differences were detected between sites based on collected chironomid communities when grouped by wetland origin (artificial vs. natural) or size. Observed differences between communities sampled from natural and artificial wetlands support regulatory concerns that artificial wetlands may not sufficiently emulate natural systems and that a constructed wetland system may take generations, or even centuries to sufficiently mimic its natural counterpart. Mitigation design complexity does appear to provide a diversity of microhabitats favorable to a greater variety of chironomids. However, a lack of statistical significance may support assertions that mitigation sites are successfully replacing natural wetlands. Implementation of CPET-based community structure analyses requires intensive labor and expertise and is not practical for regulatory purposes, but can provide robust data for effective and detailed site analysis.

Lake St. Croix is a natural impoundment located at the southern end of the St. Croix River. Land use changes since European settlement (c. 1850) have resulted in nutrient runoff, eutrophication, and periodic oxygen depletion in the hypolimnion of Lake St. Croix. Establishing sound lake management practices requires knowledge of historical conditions obtained through paleoecological studies. Remains of non-biting midges (Insecta: Diptera Chironomidae) in lake sediments have been shown to be reliable indicators of past hypolimnetic oxygen conditions. Cores from two sub-basins in the lake were collected in 2006. Midge analysis indicated that shifts in species assemblages correspond to the times of land use change. Chironomus and Procladius, which are tolerant of low oxygen levels, increased in relative abundance as land use changes adversely impacted the St. Croix River’s watershed. Volume-weighted hypolimnetic oxygen concentrations were estimated using a transfer function developed for southern Ontario. Mean post-settlement chironomid reconstructed average volume-weighted hypolimnetic oxygen values were 0.73 mg/L lower than mean pre-settlement values for sub-basin 1, near Prescott, WI and 0.45 mg/L lower for sub-basin 3, near Lakeland, MN. These results indicate that oxygen depletion has occurred in the lake since the time of European settlement, and are supported by increases in the relative abundance of eutrophic midge bioindicators and the decrease in relative abundance of bioindicators of less productive conditions since the 1850s. This study, in conjunction with other historical and paleoecological studies of Lake St. Croix, provides historical data for setting management goals and strategies for Lake St. Croix.

No description available.

The African Rice Gall Midge (AfRGM), Orseolia oryzivora Harris and Gagné (Diptera: Cecidomyiidae), is an endemic rice pest found throughout Africa. The failure of most other control methods imposes the need to use crop resistance. This study was initiated: (1) to develop an accurate method for assessing damage caused by AfRGM; (2) to determine AfRGM resistance genes’ modes of action, the heritability estimates of their resistance to AfRGM and the behavioural pattern of progenies with resistance to AfRGM attack; (3) to reveal convergent evolution of same or similar resistance gene(s) in geographically distinct landraces, or divergent evolution of genotypes carrying the same gene, by analysing the genetic diversity among five AfRGM parental lines; (4) to build a core sample of progenies to be used as a reduced mapping population, largely reflecting the entire genome of the whole population, after an estimate of the heritability of 15 agro-morphological descriptors and; (5) determine Simple Sequence Repeat (SSR) markers flanking genes or quantitative trait loci (QTLs) linked to resistance to AfRGM. A method of accurately assessing damage caused by AfRGM was determined by comparing four methods of assessment including the International Rice Research Institute’s (IRRI) Standard Evaluation System (SES) for rice and three methods based on resistance index (RI) assessments differing in the computing of the percentage of tillers with galls on a resistant check variety. The RI-based assessment (RI-BA) methods consistently provided a better evaluation of AfRGM damage than the SES, regardless of the trial size. Within RI-BA methods, RI-BA2 was always more accurate than RI-BA1 and RI-BA3 when the plot was large. RI-BA2 and RI-BA3 were equally accurate when the plot size was small, and they provided better estimates than RI-BA1. When the plot was of medium size, RI-BA2 was more accurate than RI-BA3; RI-BA3 also surpassed RI-BA1. Overall, the best method of assessing AfRGM damage was RI-BA2, regardless of the plot size. Five rice populations including F1, F2 and F3 generations involving ITA306, a susceptible variety of Oryza sativa subsp. indica, and four varieties having different reactions against AfRGM were used to determine the genetic basis of resistance and estimate the heritability of resistance to AfRGM. All the F1s were susceptible, suggesting recessive gene inheritance. The F2 generations’ segregation pattern of 1R:15S in both ITA306-TOS14519 and ITA306-TOG7106 crosses as well as the segregation of 1R:8Seg:7S in ITA306-TOS7106 F3 families indicated that the AfRGM resistance expression being studied is governed by two genes. The deviation of the segregation patterns of crosses involving ITA306 and the tolerant parental lines from Mendelian segregation ratios suggests that the tolerance to AfRGM shown by BW348-1 and Cisadane is under complex mechanisms of control rather than under simple genetic control. The narrow-sense heritability estimates of resistance to AfRGM were low in populations involving tolerant varieties and were high in populations involving resistant varieties. They ranged from 0.086 in the ITA306-Cisadane population, to 0.4 in the ITA306-TOG7106 population. Conversely, the broad-sense heritability estimates ranged from 0.23 (ITA306-Cisadane) to 0.63 (ITA306-TOS14519). The behavioural patterns of progenies against AfRGM attack were evaluated for 532, 413 and 479 F2 progenies from ITA306-BW348-1, ITA306-Cisadane and ITA306-TOS14519 crosses, respectively, in addition to 90 BC1F2 progenies from the ITA306 and TOG7106 cross. One F3 generation of 649 families from a cross between ITA306 and TOS14519 was also tested. Four types of behavioural pattern categories were observed: (1) progenies were more resistant than the resistant check entry at 45 DAT and 70 DAT; (2) progenies were more resistant at 45 DAT and became susceptible at 70 DAT; (3) progenies were susceptible at both 45 DAT and 70 DAT; (4) progenies were susceptible at 45 DAT but reverted to resistant at 70 DAT. The first three categories were the most frequently observed and occurred in all cross combinations. The last category was observed only for a few progenies from the ITA306-TOS14519 F2 and F3 generations and, surprisingly, many from the ITA306 and BW348-1 cross. Heritability estimates were calculated for 15 major traits in an F3 population in order to predict the genetic gain associated with each trait, together with the resistance to AfRGM and to estimate the influence of the environment on phenotypic values. Broad-sense heritability (H2) estimates were high for the penultimate leaf length (PLL) - 0.99, penultimate leaf width (PLW) – 1.0, flag leaf length (FLL) - 0.99, flag leaf width (FLW) – 1.0, ligule length (LigL) - 0.99, tillering ability (Til) - 0.99, number of days to booting (DB) - 0.95, number of days to first heading (DFH) - 0.96, number of days to heading (DH) - 0.89, number of days to maturity (DM) - 0.98, culm length (CL) - 0.99, plant height (PH) - 0.99, panicle length (PanL) - 0.95, secondary branching (SB) - 0.95 and the thousand grains weight (TGW) - 0.71. Conversely, narrow-sense heritability estimates were very low (nearly 0) in PLL, FLL, Lig, DB, DFH, DM and SB or low (at most 0.267) in PLW, FLW, DH and PH, with a high value of 0.727 for TGW. Inheritance of the traits studied was therefore under non-additive gene effects rather than additive genetic effects and can therefore be improved using pedigree breeding schemes along with breeding for AfRGM resistance. Fine genetic evaluation of five AfRGM parental lines was studied in terms of polymorphisms using 303 SSR primers covering the rice genome. Of the 178 polymorphic primers identified, 60 were highly polymorphic and informative. The number of alleles amplified by these primers ranged from one to five for a total of 1,041 alleles. The polymorphism rate was globally high, ranging from 45.2% to 66.8%. The mean of the polymorphism information content (PIC) was 0.553. Factorial analysis, based on the allelic diversity, demarcated the parental lines into Oryza glaberrima Steud, Oryza sativa subsp. japonica and O. sativa subsp. indica groups, while a cluster analysis distinguished them into four groups: AfRGM resistant, susceptible, moderately resistant and tolerant. BW348-1 and Cisadane showed the least diversity, despite their distant geographical origins. TOS14519 and TOG7106 showed more divergence to ITA306 despite their common West African origin. This variability amongst the genotypes tested is the result of farmer-based selection for AfRGM resistance rather than direct breeding efforts through breeder intervention. A method of selecting individuals for a mapping population, based on a core sample, was developed in order to speed up the mapping procedure. A diversity study amongst F2 and F3 generations involving 15 quantitative and 26 qualitative agro-morphological characters was carried out and led to the dropping of seven non-discriminant descriptors. The diversity index (H) was calculated for each remaining character and the discriminant descriptors were selected based on a diversity index threshold value above 0.4. Four descriptors of H values less than 0.35 were therefore dropped. The sizing of the core collection of 64 individuals and the selection of these individuals were done using MSTRAT version 4.1 package in redundancy mode, a construction run of 100 times with an iteration number of 500. The core sample was similar to the whole population for clustering pattern, minimum and maximum quantitative values and diversity index, while mean values and coefficient of variation distinguished them. The core sample, which represents 10% of the whole population, also revealed the same phenotypic variation and the same genotypic segregation according to two SSR markers. It can therefore efficiently reflect the whole population as a mapping population. Finally, a study was undertaken to identify flanking markers to the gene/QTL involved in the resistance against AfRGM using bulked segregant analysis (BSA). A polymorphism study between ITA306 and TOS14519 displayed 145 polymorphic SSR markers, which were used to screen the bulks that originated from the two tails, and depicted only two SSRs as candidate markers linked to gall midge resistance. These markers included RM317 and RM17303 which displayed strong significance after an analysis of variance using an F test, meaning that they were segregating with the resistant alleles. / Thesis (Ph.D.)-University of KwaZulu-Natal, Pietermaritzburg, 2012.

La cécidomyie orange du blé, Sitodiplosis mosellana (Géhin), est un ravageur commun du froment. Présente sur les trois continents de l’hémisphère Nord, cette espèce est connue depuis deux siècles mais son contrôle reste difficile tant par sa présence discrète que par ses effectifs hautement variables. En Wallonie, les niveaux d’infestations sont globalement faibles mais atteignent localement des seuils inquiétants.<p>Au début des années 2000, la phéromone sexuelle de S. mosellana a été identifiée au Canada. Cette découverte a permis la fabrication de pièges qui ont considérablement amélioré la détection et la mesure des vols de cet insecte minuscule. De 2007 à 2010, les captures de S. mosellana ont été mesurées quotidiennement dans plusieurs dizaines de champs de Wallonie, aux historiques et aux couverts variés.<p>Les volumes de captures au piège à phéromone sexuelle ont été très importants. Il a fallu en étudier la signification, notamment en termes de mesure du risque. En effet, si les mâles sont efficacement capturés, seules les femelles constituent un risque de dégâts. L’interprétation correcte des captures à l’aide de ce type de piège, a été rendue possible par l’observation de différences fondamentales concernant la mobilité et la distribution spatiale des mâles et des femelles de S. mosellana. Même s’ils ne mesurent pas directement l’émergence proprement dite, les pièges à phéromone ont permis, grâce à leur très grande sensibilité, de préciser les connaissances sur l’émergence des adultes et de révéler que plusieurs vagues d’émergence pouvaient se succéder au cours d’une même année.<p>La prévision des émergences de la cécidomyie orange du blé, constitue la clé de voûte de la lutte contre ce ravageur dont un contrôle efficace par des insecticides ne se justifie éventuellement que lorsque la courte saison des pontes coïncide avec l’épiaison des froments. Les patrons d’émergence obtenus par les pièges ont été confrontés aux prévisions de différents modèles conçus en Europe ou en Amérique du Nord, et appliqués aux conditions météorologiques observées de 2007 à 2010. Aucun de ces modèles n’a prévu correctement les émergences sur l’ensemble des quatre années.<p>Les données d’émergence obtenues à l’aide des pièges à phéromone (effectifs élevés et relevés quotidiens) ont fait apparaître une relation de cause à effet entre, d’une part les vagues d’émergences et, d’autre part les épisodes pluvieux observés trois à six semaines plus tôt. L’écart entre une &61618;pluie inductrice&61618; et la vague d’émergence induite correspondante s’est avéré constant en termes d’accumulation de température :il équivaut à 160 degrés-jours en base 7°C. Partant de ce constat et des acquis des modèles antérieurs, un modèle prévisionnel original des émergences a été développé et validé sur le terrain. Allié à une meilleure connaissance de la biologie du ravageur, il constitue un outil majeur de la lutte intégrée.<p>Par ailleurs, les travaux menés ont également révélé l’existence d’un biais fréquent dans les essais d’évaluation des variétés, entraîné par la concentration des pontes de cécidomyie orange sur les premières parcelles atteignant le stade épiaison. Dans le système d’évaluation en vigueur, notamment pour l’inscription dans les catalogues nationaux, ce biais conduit à une sous-estimation du potentiel de rendement des variétés de blé les plus précoces.<p>Enfin, la découverte du rôle inducteur des pluies sur l’émergence des adultes a été exploitée en conditions contrôlées pour planifier des émergences échelonnées, et pour disposer, pendant une longue période, de jeunes adultes prêts à pondre. Cette application permet dès à présent de mesurer en serre le niveau de résistance des variétés exposées de façon homogène à l’insecte, quel que soit leur degré de précocité.<p>De diverses façons, cette étude contribue à une meilleure connaissance de la cécidomyie orange du blé et offre de nouveaux outils pour la lutte intégrée contre ce ravageur.<p><p>--------------------------------------------------<p><p>The orange wheat blossom midge, Sitodiplosis mosellana (Géhin), a common pest of wheat throughout the northern hemisphere, is known for two centuries but remains difficult to control due to its discrete behavior and its highly variable population level.<p>In general, the infestation levels in Wallonia (Belgium) are low, although levels could locally exceed worrying thresholds. <p>In the early 2000s, the sexual pheromone of S. mosellana has been identified in Canada. This discovery has led to the manufacturing of traps which have greatly improved the detection of this tiny insect. From 2007 to 2010 in Wallonia, S. mosellana captures have been daily registered in about 20 fields with different cropping histories and grown with different crops.<p>Insect captures by pheromone traps were numerous. Relation between amount of captures and risk measurement has been studied. As expected, only the males are attracted by the pheromone and the risk of ears infestation is mainly related to the presence of females. The correct interpretation of captures in pheromone traps has been established by the observation of fundamental differences between males and females concerning their mobility and their spatial distribution. <p>Despite the fact that pheromone traps are not real emergence traps, they have led to new information on adult emergence indicating that several emergence waves can be consecutive during the same year. <p>Forecasting the emergence of the adult orange wheat blossom midge is a key element on pest management. Insecticides treatments are sometimes justified when the egg laying period of the insect coincides with ear emergence of wheat. Emergence patterns established from captures of pheromone traps have been compared with the forecast of several models built in Europe or North America. These forecasting models were used with the meteorological data observed from 2007 until 2010. None of the six tested models provided a reliable forecast across the four years of our study. <p>Emergence data from catches in pheromone traps were very accurate because the number of catches were high and were taken each day. This emergence data showed a relation between emergence waves and rainfalls occurring during the preceding 3 to 6 weeks. The lag between inductive rain and emergence wave is constant in terms of temperature accumulation: it is equivalent to 160 degree–days above 7°C. This discovery, combined with experience from previous models, was incorporated into a new forecasting model.<p>In addition, the present work has also revealed the existence of a common bias in variety evaluation trials leading sometime to the concentration of the eggs in the earliest earing variety. In the current evaluation system, this bias leads to a sub-evaluation of the yield for the most precocious varieties. <p>Finally, the discovery of the inductive rain for adult emergence has been used in the screening for resistant varieties to S. mosellana by providing adults during the complete duration of the test. This application of the model allows to measure, under controlled conditions, the level of resistance of all varieties (early and late heading varieties) which are exposed homogeneously to the insect.<p>In total, this study has contributed to a better understanding of the orange wheat blossom midge and provides some new tools in the management of this pest.<p> / Doctorat en Sciences agronomiques et ingénierie biologique / info:eu-repo/semantics/nonPublished