This study attempted to determine whether ova are formed from the epithelial covering of the ovary during sexual maturity, and if so to determine how they are formed and to see if there is any relation between the formation and the breeding season.

I examined small mammal demography and habitat associations in 4 forest cover types on Quantico Marine Corps Base, VA. Study sites included clearcut, shelterwood, mature-riparian, and mature-upland habitats. My primary objective was to determine whether the abundance, species composition and demographic characteristics (density, survival, reproductive effort) of small mammals varied with respect to forest cover type. Secondarily, I was interested in identifying patterns of small mammal habitat selection and the factors that influence those patterns at micro- and macroscales. Small mammals were captured from May 1997-January 1999 on 10 sites (2 clearcut, 4 shelterwood, 2 riparian, and 2 mature) using a combination of Sherman live-traps and pitfall traps. Small mammal abundance and demographic characteristics were examined across forest cover types using a combination of statistical analyses, including Chi-square tests, Kruskal-Wallis tests and repeated measures ANOVA. I surveyed microhabitat features at individual trap stations (n=1000) using variable sized plots and the point quarter method and used these data to determine macrohabitat characteristics for sites (n=10). I examined species-habitat relationships at micro- and macro-spatial scales using Kruskal-Wallis tests, Wilcoxon Rank Sum tests, simple linear regression, stepwise multiple regression and stepwise logistic regression. Fourteen species of small mammals were captured over 7 trapping occasions. Five species including white-footed mice (Peromyscus leucopus), northern short-tailed shrews (Blarina brevicauda), eastern chipmunks (Tamias striatus), meadow voles (Microtus pennsylvanicus), and woodland voles (Microtus pinetorum), accounted for approximately 95% of the total number of individuals captured. Overall relative abundance and species composition of small mammals differed significantly across forest cover types. Catch per unit effort was greatest in shelterwoods followed by riparian, clearcut and mature forest cover types. I found significant differences in the abundances of white-footed mice and eastern chipmunks across forest cover types but not in those of northern short-tailed shrews, meadow voles or woodland voles. Shelterwood stands provided the highest quality habitat for white-footed mice and eastern chipmunks while clearcut stands provided high quality habitat for northern short-tailed shrews. Assessments of habitat quality for other species were based on weak evidence or inconclusive. Microhabitat preferences for the 5 small mammal species with > 100 captures were generally consistent with those previously reported in the literature. White-footed mice, eastern chipmunks and northern short-tailed shrews were associated with woody debris and brushy microsites, while meadow voles were associated with grassy vegetation and woodland voles with the presence of soft mast and woody stem densities. For each of these species, microhabitat was able to predict presence at individual trapping stations at a level better than expected by chance. For white-footed mice and woodland voles, however, habitat selection was found to be dependent upon macrohabitat, suggesting that habitat selection for these species is dynamic. Macrohabitat features were related to the abundance of several small mammal species. In general, the habitat characteristics important to individual species at microscales tended to be important at macroscales as well. The results of this study suggest that current even-aged forest management practices on Quantico Marine Corps Base are compatible with the maintenance of native populations of small mammals. Disturbances created by harvesting, at least temporarily, resulted in favorable microhabitat conditions for a variety of small mammal species. Species such as southern flying squirrels, however, were sensitive to disturbance, although it is likely that successional changes allow rapid recolonization of disturbed sites. / Master of Science

No description available.

Dissertation (PhD)--University of Stellenbosch, 2006. / ENGLISH ABSTRACT: Increases in taxonomic sampling and the numbers and types of markers used in phylogenetic studies have resulted in a marked improvement in the interpretation of systematic relationships within Eutheria. However, relationships within several clades, including Paenungulata (Hyracoidea, Sirenia, Proboscidea), remain unresolved. Here the combination of i) a rapid radiation and ii) a deep divergence have resulted in limited phylogenetic signal available for analysis. Specifically i) a short internode separating successive branching events reduces the time available for changes to occur, while ii) the longer the time since divergence, the greater the opportunity for signal to be negatively affected by homoplasy. This is evident in both molecular and morphological data where an overall consensus on paenungulate relationships is lacking. Morphological analysis of anatomical and fossil evidence favours the association of Sirenia (S) and Proboscidea (P) (Tethytheria) to the exclusion of Hyracoidea (H); further, support for uniting these three taxa as Paenungulata is contentious. In contrast, molecular data provide strong support for Paenungulata but intra-ordinal relationships are ambiguous. Although results from mitochondrial DNA sequence data favour Tethytheria, there is no consensus of support for this clade from nuclear DNA. Nuclear DNA is typified by node instability but favours H+P in the largest concatenation of sequences. Due to the expected increased effect from homoplasy and consequently the increased likelihood for misleading signal, it is unclear which result is most likely to represent the “true” tree. An analysis of available and added intron sequences to characterise signal heterogeneity among nuclear DNA and mitochondrial DNA partitions indicated that the phylogenetic utility of partitions varies considerably. Subpartitioning of the data according to similar evolutionary processes/characteristics (e. g., mtDNA vs. nDNA and codon position) revealed new insights into the signal structure of the data set; specifically i) that nuclear DNA first codon positions, and to a lesser degree second codon sites, provide convincing support for H+P, and ii) that support for S+P by faster evolving sites within mtDNA suggests that this may be the result of misleading signal. If H+P represents the “true tree”, then support for this clade indicates that phylogenetic signal has been reduced over time as a result of multiple hits, which explains the presence of (hidden) support in slower evolving sites where homoplasy is less likely to occur, in contrast to faster evolving sites where no support for H+P was observed. In an attempt to provide further resolution from an alternative perspective to that possible with DNA sequence data, chromosomal rearrangements were identified among the three paenungulate lineages. Using comparative chromosome painting, unique changes within each order and specific to Paenungulata were characterised, however, intra-ordinal synapomorphies were not recovered. Although this may suggest a hard polytomy, the slow to moderate rate of evolution estimated from the data is likely not sufficient relative to the rapid radiation associated with the paenungulate node. Further examination of chromosomal rearrangements at a higher level of resolution may yet reveal informative changes. / AFRIKAANSE OPSOMMING: ‘n Toename in die aantal taksonomiese monsters sowel as die aantal en soort merkers wat in filogenetiese studies gebruik word, het tot ‘n merkbare verbetering in die vertolking van sistematiese verwantskappe binne die Eutheria gelei. Desondanks bly ‘n aantal klades (stamlyne), met inbegrip van Paenungulata (Hyracoidea, Sirenia, Proboscidea), steeds onopgelos. By laasgenoemde het die kombinasie van i) ‘n vinnige radiasie en ii) ‘n diep divergensie die filogenetiese sein wat vir analise beskikbaar is, beperk. Meer spesifiek sal i) opeenvolgende vertakkings wat deur kort internodusse geskei word die beskikbare tyd waartydens veranderings kan intree, verminder, terwyl ii) ‘n toename in tydsverloop sedert divergensie die kans dat die sein deur homoplasie nadelig beïnvloed sal word, vergroot. Dit word in sowel molekulêre en morfologiese data, waar ‘n oorhoofse konsensus t.o.v. verwantskappe van Paenungulata ontbreek, waargeneem. Morfologiese analise van anatomiese en fossielbewyse ondersteun die samevoeging van Sirenia (S) en Proboscidea (P) (Tethytheria) ten koste van Hyracoidea (H). Ondersteuning vir die samevoeging van dié drie taksa as Paenungulata is egter aanvegbaar. In teenstelling hiermee word Paenungulata sterk deur molekulêre data ondersteun, al bly die verwantstkappe op intra-orde vlak, steeds onduidelik. Alhoewel die resultate van mitochondriale DNA op Tethytheria dui, word die klade nie deur data van kern-DNA ondersteun nie. Kern-DNA word gekarakteriseer deur node instabiliteit maar verkies H+P in die grootste samevoeging van geen volgordes. Na aanleiding van die verwagte toename in die effek van homoplasie en die gevolglik groter kans op ‘n misleidende sein, is dit nie duidelik watter van die resultate die meer korrekte filogenetiese stamboom verteenwoordig nie. Analise van beskikbare en nuut toegevoegde intron-volgordes om sein-heterogeniteit tussen kern- en mitochondriale DNA verdelings te karakteriseer, toon dat die filogenetiese nut van verdelings beduidend verskil. Onderverdeling van die data op grond van soortgelyke evolusionêre prosesse/karaktereienskappe (bv. mtDNA vs. nDNA, en kodonposisie) het na nuwe insigte in die seinstruktuur van die datastel gelei. Meer spesifiek dat i) kern-DNA se eerste kodonposisies, en tot ‘n mindere mate die tweede kodonposisies, H+P oortuigend ondersteun en ii) dat ondersteuning vir S+P deur posisies binne mtDNA wat vinnig verander, op ‘n misleidende sein mag dui. As H+P die korrekte stamboom verteenwoordig dui ondersteuning vir die klade op ‘n filogenetiese sein wat met verloop van tyd as gevolg van veelvuldige seinvoorkomste verklein het. Dit verklaar die aanwesigheid van versluierde ondersteuning in stadig-veranderende posisies waar die neiging tot homoplasie klein is, in teenstelling met posisies wat vinniger verander en waar ondersteuning vir H+P nie waargeneem is nie. Op soek na verhoogde resolusie vanuit ‘n ander perspektief as DNA-volgordebepaling, is chromosomale herrangskikkings in die drie stamlyne van Paenungulata nagevors. Met behulp van vergelykende chromosoomkleuring is unieke veranderings binne elke orde en spesifiek binne Paenungulata gekarakteriseer, maar geen sinapomorfe kenmerke is op die intra-orde vlak gevind nie. Alhoewel dit op ‘n onopgeloste politomie mag dui, is die stadige tot matige evolusietempo wat van die data afgelei word, relatief tot die vinnige radiasie wat met die Paenungulata-nodus geassosieer word, waarskynlik onvoldoende vir ‘n oplossing. Verdere navorsing oor chromosomale herrangskikkings met ‘n hoër resolusievlak mag addisionele insiggewende veranderings aantoon.

A survey of the mammalian fauna of the Salamonie Reservoir, Huntington and Wabash Counties, Indiana, was conducted from September 1, 1970, through December 31, 1971. Specimens were collected by trapping, shooting, and as road kills. Data were also collected from local residents, hunters, and trappers. Specimens collected were identified, measured, weighed, and preserved as study skins and skulls. Measurement ranges, means, and standard deviations were computed for all species with two or more specimens. Study skins and skulls were deposited in the Ball State University Mammal Collection.Results indicate at least 29 species of mammals are present on the Salamonie Reservoir study area. Twenty three species were collected during the study and six were accounted for in literature reports of previous studies.Ball State UniversityMuncie, IN 47306

Call number: LD2668 .T4 1961 K65

Call number: LD2668 .T4 1964 H84 / Master of Science

Call number: LD2668 .T4 1965 C46 / Master of Science

Underwater sound from anthropogenic sources such as seismic surveys, marine renewable device installations and naval exercises has the potential to disturb and cause injury to a variety of marine species. There is particular concern for the potential effects upon marine mammals, which utilise sound to communicate, hunt and navigate. Observed effects include behavioural changes and reduced sighting rates, with unknown consequences for individuals or populations over time. Potential effects on marine mammals include sound induced damage to auditory systems, altered diving behaviour potentially resulting in decompression sickness, stranding and death. The aim of the thesis was to develop a framework of best practice measures relating to mitigating the potential effects of underwater sound on marine mammals during offshore exploration and development operations. In order to mitigate the potential effects of underwater sound, regulatory guidelines have been developed and implemented around the world, principally for seismic surveys. These guidelines limit the activation of seismic sources when in proximity to marine species, and involve the use of specially trained personnel on survey vessels known as Marine Mammal Observers (MMOs). A critical review of the guidelines identified variation in the level of precaution applied to measures, such as the distance at which species can be sighted before reducing sound output from the operation. MMOs collect sighting information for all encounters with marine species, resulting in large volumes of data detailing species occurrence and behaviour. A sample dataset was found to be subject to variation in quality due to the different academic backgrounds and training levels of personnel. The data highlighted significant differences in relation to sighting distance while the sound source is active or inactive, though lacked detail with regard to behaviours, likely due to the lack of ethological expertise among the observers. A questionnaire was conducted to determine any differences of opinion regarding current mitigation practice and the underlying issue between stakeholder groups. There was no difference of opinion between stakeholders regarding the importance of underwater sound compared to other environmental issues facing marine species such as fisheries by-catch and overfishing. Areas of consensus were evident, with most stakeholders finding current mitigation practice to be only ‘somewhat’ effective, and that sightings data collected by MMOs should be better utilised, with it being more useful for adding to our knowledge of marine mammal distributions than for determining the effects from operations. A framework for enhancing the collection, use and dissemination of MMO data is described with recommendations for the development of a Global Positioning System (GPS) enabled smartphone/ tablet based field data collection system, linked to an internet based geographical information system to enhance species distribution analysis. By coupling this with a simplified mitigation methodology, the outcome would enhance the risk management of operations in relation to where species are known to occur, with mitigation aimed at reducing exposure at critical times or in critical habitats. Simplifying mitigation and enhancing data collection and use will benefit stakeholders in managing essential operations responsibly.

published_or_final_version / Physiology / Doctoral / Doctor of Philosophy