This creative project is a field and laboratory guide major to the study of Marine Ecology in Long Island Sound, Connecticut. It provides students with basic instructions for collecting, preserving, testing, and analyzing data from field and laboratory investigations. The guide is designed as an open-ended investigative approach to the examination of the ecological aspects of the marine environment. It is arranged to incorporate the five ecosystems of the marine environment: salt marsh, estuary, rocky shore, open ocean, and sandy beach ecosystems. Included are techniques for thorough examination of the physical, chemical, and biological portions of these ecosystems.

The coastal (terrestrial) and benthic environments along the southeast Florida continental shelf show a unique biophysical succession of marine features from a highly urbanized, developed coastal region in the north (i.e. northern Miami-Dade County) to a protective marine sanctuary in the southeast (i.e. Florida Keys National Marine Sanctuary). However, the establishment of a standard bio-geomorphological classification scheme for this area of coastal and benthic environments is lacking. The purpose of this study was to test the hypothesis and answer the research question of whether new parameters of integrating geomorphological components with dominant biological covers could be developed and applied across multiple remote sensing platforms for an innovative way to identify, interpret, and classify diverse coastal and benthic environments along the southeast Florida continental shelf. An ordered, manageable hierarchical classification scheme was developed to incorporate the categories of Physiographic Realm, Morphodynamic Zone, Geoform, Landform, Dominant Surface Sediment, and Dominant Biological Cover. Six different remote sensing platforms (i.e. five multi-spectral satellite image sensors and one high-resolution aerial orthoimagery) were acquired, delineated according to the new classification scheme, and compared to determine optimal formats for classifying the study area. Cognitive digital classification at a nominal scale of 1:6000 proved to be more accurate than autoclassification programs and therefore used to differentiate coastal marine environments based on spectral reflectance characteristics, such as color, tone, saturation, pattern, and texture of the seafloor topology. In addition, attribute tables were created in conjugation with interpretations to quantify and compare the spatial relationships between classificatory units. IKONOS-2 satellite imagery was determined to be the optimal platform for applying the hierarchical classification scheme. However, each remote sensing platform had beneficial properties depending on research goals, logistical restrictions, and financial support. This study concluded that a new hierarchical comprehensive classification scheme for identifying coastal marine environments along the southeast Florida continental shelf could be achieved by integrating geomorphological features with biological coverages. This newly developed scheme, which can be applied across multiple remote sensing platforms with GIS software, establishes an innovative classification protocol to be used in future research studies. / Includes bibliography. / Dissertation (Ph.D.)--Florida Atlantic University, 2014. / FAU Electronic Theses and Dissertations Collection

Thesis (Ph. D.)--Oregon State University, 2006. / Includes bibliographical references. Also issued online.

Thesis (M.S.)--Oregon State University, 2005. / Printout. Includes bibliographical references (leaves 87-89). Also available online.

Thesis (M. Sc.)--University of Hong Kong, 1994. / Includes bibliographical references (leaves 53-54).

Thesis (Ph. D.)--Oregon State University, 2007. / Printout. Includes bibliographical references (leaves 172-174). Also available on the World Wide Web.

Marine predators such as seabirds, cetaceans, turtles, pinnipeds, sharks and large teleost fish are essential components of healthy, biologically diverse marine ecosystems. However, intense anthropogenic pressure on the global ocean is causing rapid and widespread change, and many predator populations are in decline. Conservation solutions are urgently required, yet only recently have we begun to comprehend how these animals interact with the vast and dynamic oceans that they inhabit. A better understanding of the mechanisms that underlie habitat selection at sea is critical to our knowledge of marine ecosystem functioning, and to ecologically-sensitive marine spatial planning. The collection of studies presented in this thesis aims to elucidate the influence of biophysical coupling at oceanographic fronts – physical interfaces at the transitions between water masses – on habitat selection by marine predators. High-resolution composite front mapping via Earth Observation remote sensing is used to provide oceanographic context to several biologging datasets describing the movements and behaviours of animals at sea. A series of species-habitat models reveal the influence of mesoscale (10s to 100s of kilometres) thermal and chlorophyll-a fronts on habitat selection by taxonomically diverse species inhabiting contrasting ocean regions; northern gannets (Morus bassanus; Celtic Sea), basking sharks (Cetorhinus maximus; north-east Atlantic), loggerhead turtles (Caretta caretta; Canary Current), and grey-headed albatrosses (Thalassarche chrysostoma; Southern Ocean). Original aspects of this work include an exploration of quantitative approaches to understanding habitat selection using remotely-sensed front metrics; and explicit investigation of how the biophysical properties of fronts and species-specific foraging ecology interact to influence associations. Main findings indicate that front metrics, particularly seasonal indices, are useful predictors of habitat preference across taxa. Moreover, frontal persistence and spatiotemporal predictability appear to mediate the use of front-associated foraging habitats, both in shelf seas and in the open oceans. These findings have implications for marine spatial planning and the design of protected area networks, and may prove useful in the development of tools supporting spatially dynamic ocean management.

published_or_final_version / Environmental Management / Master / Master of Science in Environmental Management

<p>This thesis concerns the predator-prey interactions of three raptor species in a Swedish arctic community: the gyrfalcon (<i>Falco rusticolus</i>), the rough-legged buzzard (<i>Buteo lagopus</i>) and the golden eagle (<i>Aquila chrysaetos</i>).</p><p>The gyrfalcon behaved like a highly specialised ptarmigan (<i>Lagopus spp.</i>) predator. Gyrfalcon’s functional response to ptarmigan was close to density independent, and ptarmigan remained the dominating prey even in areas with the lowest ptarmigan density. The gyrfalcon did not respond functionally to microtine rodents (i.e. lemmings and voles) and it was clear that the gyrfalcon did not use microtines as an alternative prey category to ptarmigan. As the gyrfalcons did not switch to any alternative prey when ptarmigan was scarce, their reproductive success seemed to be directly dependent on the amount of ptarmigan available in the breeding territories. Of the two ptarmigan species in the study area, rock ptarmigan (<i>L. mutus</i>) dominated gyrfalcon’s diet. Locally, the proportion of rock ptarmigan in gyrfalcons’ diets showed a positive relationship to the expected availability of rock ptarmigan in the breeding territories, indicating a density dependent utilisation. </p><p>The rough-legged buzzard behaved like a highly specialised microtine rodent predator and Norwegian lemming (<i>Lemmus lemmus</i>) was its preferred microtine species. The buzzards showed a type 2 functional response to lemmings. Surprisingly though, they also had a type 3 functional response to grey-sided voles (<i>Clethrionomus rufocanus</i>). We present an optimal diet model where a central place forager, during good food conditions, benefits from partial prey preference, which renders separate functional responses to each prey category. We discuss how the double functional responses of the buzzard affect the population dynamics of sympatric vole species, on both temporal and spatial scales.</p><p>The golden eagle behaved like a generalist predator, and it preyed on all major prey categories in the study area: microtines, ptarmigan, mountain hare, (<i>Lepus timidus</i>) and reindeer (<i>Rangifer tarandus</i>). It seemed to respond functionally to microtine rodent fluctuations with an increased consumption of lemmings during a peak year in the microtine rodent cycle. The golden eagle showed a numerical response to its main prey, the ptarmigan. </p><p>Ptarmigan, microtine rodents and hares seemed to have synchronized population fluctuations in the study area. Such synchronized population fluctuations are believed to be generated by predation. Although the three raptors are the main predators of their community, their predation patterns fail to explain the observed prey population dynamics in the study area. </p>

<p>Two decades ago the recruitment of YOY perch (<em>Perca fluviatilis</em>) started to decline along the Swedish east cost of the Baltic Sea. Factors that influence recruitment are e.g. eutrophication that causes habitat losses and overfishing of cod (<em>Gadus morhua</em>) which causes cascading effects in the food web. Filamentous cyanobacterial blooms are often toxic and has increased in the Baltic Sea and its coastal waters. The aim of this field study was to evaluate the effects of salinity and cyanobacterial exposure on fitness related parameters of young of the year (YOY) perch (<em>Perca Fluviatilis</em>) in a natural environment. Our study was performed in the Curonian Lagoon (Lithuania) in August 2009. The lagoon offers a temporary salinity gradient (wind induced influxes from the Baltic Sea) ranging from 7 psu in the north to 0 psu in the south. Submerged enclosures containing YOY perch were set up at three different locations along the salinity gradient in the Lagoon (referred to as North, Middle, South). The duration of the experiment was 21 or 27 days, depending on treatment. Measurements of perch condition were specific growth rate, somatic condition index (SCI) and whole fish lipid and protein content. Average chl <em>a</em> values for the three stations during the experimental time were: north 180 ± 70 µg/l chl <em>a</em>, middle 133 ± 36 µg/l chl <em>a</em> and south 180 ± 52 µg/l chl <em>a</em>. The North and the Middle stations experienced two different salinity influxes reaching a maximum salinity of 6.5 psu at the northern station. The duration of each saline influx was approximately 4-6 days. The saline water did not reach the Southern station at any time. Results show that perch from the southern station were in best condition in terms of specific growth rate and contents of total lipids. Compared to the South the perch condition declined to the Middle station and was lowest at the Northern station which experienced the highest degree of fluctuation in terms of salinity and cyanobacterial exposure. Examination of the abundance of the main food resource at the different stations revealed no statistical differences, which suggest that availability of food was not a factor in explaining the differences in growth.  The results possibly indicate that a changing environment with the potential synergistic negative effects of salinity and cyanobacteria has a higher negative impact on YOY perch condition compared to constantly high concentrations of cyanobacteria.</p>