This thesis presents results from investigations of secondary metabolites from marine organisms. The first part pursued the isolation of new compounds from soft bodied marine organisms, the study of aqueous extracts from the different algae and soft bodied marine organisms permitted the selection of one extract from the red alga <i>Laurencia </i>sp., from which six new sesquiterpenes cyclic ethers were isolated. The investigation of the sponge <i>Stylotella aurantium </i>collected from Fijian waters, resulted in isolation of seven previously reported pyrrole alkaloids. The second part focused on the exploration of three novel actinomycete microbes isolated from Mariana Trench sediment, collected at depth 10,898 m (Challenger Deep; 11°19’911’’ N; 142°12’372’’E) for the production of bioactive compounds. Seven novel phenazine alkaloids, dermacozines (A-I), were isolated from the fermentation broth of two Mariana Trench microbes <i>Dermacoccus abyssi</i> strain MT1.1 and <i>Dermacoccus </i>strain MT1.2. The investigated cytotoxic activity against leukaemia cell line (K562) showed that dermacozine F and G have moderate activity with IC_50s of 9 and 7 <i>μ</i>M, respectively, while the highest radical scavenger activity was observed with dermacozine C with an IC₅₀ value of 21 <i>μ</i>M. Investigation of <i>Micromonspora</i> sp. isolated from Mariana Trench sediment led to the isolation of six compounds including: one unusual depeptide and the known deferoxamine together with four known diketopiprazines. Finally, the last part of work focused on the investigation of molecular basis of cold temperature and high pressure adapted growth in extremophilic microbes such as <i>Photobacterium profundum sp.</i> The overall aim of this project was to understand more about the high pressure and cold-adapted growth of two novel <i>P. profundum</i> strains SS9R (Piezophile) and 3TCK (Piezosensitive) by studying the surface of polysaccharides which play an important role in the cold-adapted growth of <i>P. profundum</i> <i>SS9.</i>

Tributyltin is arguably the most toxic compound ever to be deliberately introduced into the marine environment as an ingredient of antifouling paints. It has had widespread toxic effects on a range of marine organisms, with some gastropod species being particularly sensitive. Effects of TBT on non-target species have resulted in partial bans on its use in many countries, so that new inputs to the water column have decreased in most areas. One of the physicochemical features of TBT is that it is readily sequestered by suspended particulates due to its low solubility and its hydrophobicity, therefore becoming incorporated into estuarine sediments. The availability of this sediment-bound TBT has been investigated through its potential for re-release back to the water column, and directly from the sediment using the sediment dwelling gastropod Hinia reticulata. The sorption process itself has been investigated using natural components to determine the sediment-water partition coefficient (Kd) together with factors affecting its magnitude. Sorption by sediments has been shown to be rapid (minutes), although the achievement of equilibrium may take longer (hours), and exhibits a Freundlich-like dependence on the TBT concentration due to the variable energies of TBT sorption sites on sediment particles. The major determinant of Kd is sediment type, greater adsorption occurring in fine-grained organic rich sediments compared to low organic sands; although both salinity and pH modify the degree of adsorption. The sorption process has been shown to be reversible, so that previously contaminated sediments may act as reservoirs of TBT, releasing the compound back to the overlying water for many years. Hinia reticulate has been shown to be an effective and quantitative accumulator of both dissolved and sediment-bound TBT, principally acquiring TBT from water across the respiratory surfaces. When additionally exposed to sediments, significantly higher body burdens were accumulated, with up to 80% of the total attributable to the sediment. Uptake of TBT across the surface of the headtfoot appears to be an important pathway for sediment-exposed Hinia reticulata, while the ingestion of contaminated sediment does not appear to occur. Hinia reticulata is capable of metabolising TBT to lesser butylated and presumably less toxic products which are excreted, making its accumulated body burdens responsive to changing environmental TBT levels, and increasing its value as a biomonitor When exposed to a range of TBT contaminated sediments, Hinia reticulata showed there to be greater TBT availability from sediments with a low sorptive capacity (sands), principally through desorption of TBT to the overlying water. Fine-grained organic-rich muds, which have a greater capacity for TBT, produced lower accumulated burdens in Hinia reticulata, but may represent more important long-term sources of TBT to benthic organisms in estuaries.

Thesis (Ph. D.)--University of Washington, 2001. / Vita. Includes bibliographical references (leaves 145-164).

Few previous studies of zooxanthellae have considered temperate Anthozoan symbioses. The present study investigates how the characteristics of zooxanthellae symbiotic with temperate Anthozoa vary in response to natural variations in environmental parameters. Variations in the number (density), division rate, size and ultrastructure of zooxanthellae from the temperate anemones Anemonia viridis (Forskal) and Anthopleura ballii (Cocks) were examined in response to season, water depth and artificial irradiance (A. viridis in aquaria). In addition, variations in chlorophyll concentrations were considered in intertidal and laboratorymaintained A. viridis. Zooxanthellae from both intertidal and shallow subtidal A. viridis showed variations which correlated with seasonal variations in environmental parameters. Zooxanthella density in intertidal A. viridis showed an inverse relationship with temperature, daylength and sunshine. Higher zooxanthella density was observed in A. viridis from a shallow, subtidal habitat during February 1998 (2.06 ± 0.11 x 108 cells g"' wet weight) than during July 1998 (1.01 ± 0.09 x 108 cells g'' wet weight; T= 7.67, p< 0.001). Stereological analysis of transmission electron micrographs showed that zooxanthellae in intertidal A. viridis had significantly higher chloroplast volume fraction during February (32.1 ± 1.5 %) than July (21.8 ± 2.1 %; T= 4.07, p<0.05). The proportion of chlorophyll a per zooxanthella was significantly higher in December than all other months except January (ANOVA, F= 5.62 p<0.05). The zooxanthellae of A. viridis may thus photoadapt to low winter irradiances by increasing zooxanthellae density, chloroplast volume and the proportion of chlorophyll a per cell. By contrast, zooxanthellae from A. viridis maintained in artificial irradiances in the laboratory of 4 µmol m=2 s' and 20 pmol m2 s' showed no variation in density or ultrastructure, due either to the low irradiances used or a lack of variation in other physical parameters compared to the field. A. ballii zooxanthella density responded to both depth and season and was lower at 6m during summer than at 6m during winter and at 18 m during both summer and winter. Chloroplast volume fractions in A. ballii was not affected by depth during winter, nor by season at 18 in. Starch and lipid stores in zooxanthellae from both A. viridis and A. ballii responded to seasonal fluctuations. Lipid was present in zooxanthellae during summer (intertidal A. viridis, volume fraction 19.8 ± 3.4 %) and absent during winter, and starch volume was significantly higher from zooxanthellae in A. ballii at 6 in in winter (14.3 ± 4.2 %) than 18 min winter (4.7 ± 1.6 %) or summer (4.7 ± 1.1 %; ANOVA, F= 6.04 p< 0.05). It is concluded that the zooxanthellae of the temperate anemones A. viridis and A. ballfi show variations in zooxanthellae characteristics which correspond to variations in dayto-day weather, season and water depth.

The study involves the investigation of the chemical composition of some marine organisms. This entails collecting the organism, extracting compounds from it and separation, characterization and identification of these compounds. Marine chemistry has been ignored by many scientists in the past and it is for this reason that these organisms have been investigated, with the aim of discovering their chemistry and also finding new compounds which might be of value in our society. Such value may be the medicinal benefit and/or the understanding of some toxicological effect of some species. This study was conducted on Codium extricatum, Palythoa natalensis, Zoanthus sansibaricus and Zoanthus durbanensis all of which were collected from reefs situated at the southern part of Durban in KwaZulu-Natal (KZN). Carpobrotus edulis was another organism that was used in this work. The plant normally occurs on sand dunes. This, however, was collected from the terrestrial environment within the premises of University of Natal (Durban). Sterols, i.e., compound l, 2 and compound 4 were obtained from both the Codium and Zoanthus genera. Zoanthus also gave compounds which are derivatives of genetic material and these include inosine nucleoside, adenine nucleoside and guanine nucleoside. Zoanthus further gave a compound which is aromatic in nature i.e., compound 5 and this belongs to a class of compounds known as the tyramines. Cinnamic acid was found from Carpobrotus edulis. The structures of all compounds were elucidated by conducting a number of experiments using spectroscopic methods. These included nuclear magnetic resonance spectroscopy (n.m.r), mass and infrared spectroscopy. / Thesis (M.Sc.)-University of Natal, Durban, 2000.

Thesis (Ph. D.)--California Institute of Technology, 1979. / Includes bibliographical references (leaves [146]-[162]).

Marine pollution resulting from oil spillage has received much attention mostly due to the damaging effects it has on fisheries and aquacultures. One component of oil that is widely studied due to its toxic and carcinogenic properties is the polycyclic aromatic hydrocarbons. The physical and chemical properties of these compounds control their distribution into the various phases of the environment. The rates of elimination of these compounds from impacted organisms were investigated in laboratory and field experiments using selected marine organisms (Mytilus edulis and Salmo salar). The elimination of individual PAH compounds followed first order kinetics. Elimination rate varied among compounds and generally decreased with increase in molecular weight and degree of alkylation. Elimination rate constants (k2) and biological half-lives (t1/2) evaluated from chronically exposed mussels (collected from Aberdeen harbour) in separate laboratory and field studies were comparable but differed from those evaluated from acutely exposed mussels. Shorter t1/2 were obtained from acutely exposed mussels. The t1/2 ranged between 0.5- 22 d (acute exposure) and 3.8- 31.5 d (chronic exposure).The longer apparent t1/2 calculated for the chronically impacted mussels was attributed to the retention of the compounds in a stable compartment due to long period of exposure that limited exchange with the surrounding water. Contrary to expectation, t1/2 for similar compounds was higher in salmon than in mussels. The reason for this was unknown but attributed to the route of elimination. A good correlation (r2 > 0.72) was found between PAHs tissue concentration and taint intensity in salmon. Comparison of the results from this study with literature data showed that tank water replacement time and exposure duration affects rate of PAHs elimination. The data generated in this study and some of the reviewed studies will find application in different oil spill scenarios. The usefulness and limitations of the n-alkanes profile, PAH distribution and concentration ratios, and specific biomarker ratios from organisms in oil spill source identification was also demonstrated.

The Best PhD Thesis in the Faculties of Dentistry, Engineering, Medicine and Science (University of Hong Kong), Li Ka Shing Prize,2007-2008 / published_or_final_version / Biological Sciences / Master / Master of Philosophy

The projects described in this dissertation concentrated on investigating Caribbean species for qualitative and quantitative chemical differences. Chapter one includes a brief update on the status of natural products as drugs, a discussion of the biodiversity of Caribbean marine organisms as well as a discussion about the chemistry of algae and sponges. In chapter two, an experiment to test for possible effects of warmer, more acidic water and how that will impact coral reef organisms was conducted. Six common Caribbean coral reef sponge species were grown in seawater for 24 days ranging from values experienced at summer-maxima (temperature = 28 ºC; pH = 8.1) to those predicted for the year 2100 (T = 31 ºC; pH = 7.8). For each species, attachment rates, growth, and survival were similar between temperature and pH levels. Only two metabolite concentrations varied significantly between treatments but were similar to baseline levels. In chapter three, a chemical survey of Florida Keys algae was performed using MeOH extraction and HP-20 SPE with varying Me2CO:H2O solutions. 1H NMR spectra were collected for each fraction and analyzed for interesting signals. A Laurencia sp. was extracted and found to contain the known compound isodactylyne (61) with the structure determined using spectroscopic analyses. In chapter four, a Laurencia obtusa specimen was investigated to determine the compound causing oxygenated signals between 4.50 – 4.80 ppm in the 1H NMR spectra observed in chapter three. A large scale extraction and fractionation was performed and the compound was determined to be 1-O-palmitoyl-2-O-myristoyl-3-O-(6-sulfo-α- D-quinovo-pyranosyl)-glycerol (63). In chapter five, the isolation and structural elucidation of a new compound, furocaespitanenone (64) and two known compounds (10R)- and (10S)-10-O-methylfurocaespitanelactol 65 and 66, from a Laurencia sp. collected off of the Florida Keys using MeOH extraction and HP-20 column chromatography is described. A potential biosynthesis of 64 from furocaepsitane (68) is proposed. / Includes bibliography. / Dissertation (Ph.D.)--Florida Atlantic University, 2019. / FAU Electronic Theses and Dissertations Collection

Thesis (M.S.)--Rutgers University, 2009. / "Graduate Program in Cell and Developmental Biology." Includes bibliographical references (p. 45-53).