Thesis (M.S.)--Oregon State University, 2010. / Printout. Includes bibliographical references (leaves 68-72). Also available on the World Wide Web.

Thesis (M.S.)--Naval Postgraduate School, 1975. / Includes bibliographical references (leaves 72-75).

Thesis (Ph. D.)--University of Rhode Island, 2005. / Typescript. Includes bibliographical references (leaves 253-257).

Thesis (M.S.)--University of Delaware, 2005. / Principal faculty advisor: Katharina Billups, Dept. of Marine and Earth Studies . Includes bibliographical references.

Inclement climate conditions have made the Arctic Ocean logistically difficult to study, and thus, our historical knowledge of Arctic Ocean processes are limited. Recent observations indicate rapid and abrupt changes in climate. These changes are thought to includes rising temperatures, increase storm activity, altered freshwater balance and a notable decrease in the concentration and extent of sea ice covering the Arctic Ocean. Increasing awareness of these changing conditions and our poor knowledge of how the physical environment influences carbon fluxes, planktonic productivity and biogeochemical cycling have lead to international efforts to address these questions. The data presented here addresses biogeochemical cycling and phytoplankton primary production in the pelagic ecosystem. Given the pace of environmental change in the arctic (rapid ice retreat, record minimum ice extents, and temperature rise) and the relatively little historical data that is available for the region, the data presented here can also be used as a baseline data set from which predictions can be made and future observations can be compared. / Conducted as part of the Canadian Arctic Shelf Exchange Study (CASES), this thesis provides a current review of nutrient dynamics and cycling, and estimates of annual new and net primary production for the Mackenzie Shelf, the Amundsen Gulf and the Cape Bathurst polynya in the southeastern Beaufort Sea in the Canadian Arctic Ocean.

Thesis (Ph. D.)--Ludwig-Maximilians-Universität München, 2005.. / Title from PDF title page (viewed on May 13, 2006). Includes three articles co-authored with Sebastian Diehl. Vita. Includes bibliographical references.

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Thesis (S.M.)--Joint Program in Oceanography/Applied Ocean Science and Engineering (Massachusetts Institute of Technology, Dept. of Biology; and the Woods Hole Oceanographic Institution), 2011. / Cataloged from PDF version of thesis. "February 2011." / Includes bibliographical references (leaves 44-48). / Trichodesmium, a genus of diazotrophic cyanobacteria, is an important contributor to the marine nitrogen (N) and carbon (C) cycles. The extent to which Trichodesmium dinitrogen (N2) fixation contributes to the marine N cycle has been modeled based on abundance data and rate estimates from surface populations. However, recent data show that Trichodesmium populations have a broad vertical distribution. The presence of previously unaccounted for subsurface populations suggests that past estimates of the contribution of new N by Trichodesmium to the North Atlantic may be artificially low. Herein, culture and field studies were combined to examine trends in N2 fixation in discrete surface and subsurface Trichodesmium populations in the western North Atlantic. Surface populations were dominated by the raft colony morphology of Trichodesmium and surface N2 fixation rates ranged from (33 to 156 μmol h-1 mol C-1). Subsurface populations were dominated by the puff colony morphology. Subsurface N2 fixation was typically detectable, but consistently lower than surface population rates (9 to 88 μmol h-1 mol C-1). In an analysis of the entire field dataset, N2 fixation rates varied non-linearly as a function of in situ irradiance. This trend in N2 fixation versus in situ irradiance is consistent with field and culture observations in the literature (Bell et al., 2005; Capone et al., 2005), however other models that predict N2 fixation based on light predict higher subsurface N2 fixation than what was detected in this study. In culture, N2 fixation in Trichodesmium was proportional to light level over the range of irradiances tested (10 to 70 μmol quanta m-2 s-1) and over long and short time scales, suggesting subtle changes in the light field could depress subsurface N2 fixation. Since the subsurface samples were dominated by the puff colony morphology, it is unclear if the subsurface N2 fixation rates are the result of the in / by Abigail Heithoff. / S.M.

Thesis (Ph. D.)--Joint Program in Oceanography/Applied Ocean Science and Engineering (Massachusetts Institute of Technology, Dept. of Earth, Atmospheric, and Planetary Sciences; and the Woods Hole Oceanographic Institution), 2009. / Includes bibliographical references. / Trichodesmium spp. are considered the dominant nitrogen (N) fixing cyanobacteria in tropical and subtropical oceans, regimes frequently characterized by low iron (Fe). Limited information exists about what levels of Fe limit Trichodesmium N fixation. I developed a diagnostic for Fe limitation using quantitative reverse transcription PCR (qRT-PCR) of the Fe stress response gene isiB, which encodes for flavodoxin a non-Fe containing substitute for ferredoxin. I determined that high isiB gene expression corresponded to cell-specific reductions in N fixation rates in both phylogenetic clades of Trichodesmium grown on varying levels of Fe. Using these laboratory-determined thresholds, I assessed Fe limitation of Trichodesmium from the Sargasso Sea, equatorial Atlantic Ocean and Western Pacific Warm Pool in conjunction with other analytical measurements (N, phosphorus (P) and dissolved Fe (<0.4[mu]m filtered)). I found widespread Fe limitation in Trichodesmium from the Pacific Ocean and minimal expression in the North Atlantic Ocean. I also found an inverse correlation between isiB expression and dissolved Fe:P ratios in seawater and data suggesting that most dissolved Fe in seawater, including organic ligand-bound Fe, is available to Trichodesmium. These data support and refine previous model predictions and demonstrate, in situ, the importance of Fe to the marine N cycle. / by Phoebe Dreux Chappell. / S.M.

Understanding and modeling microbial responses and feedbacks to climate change is hampered by a lack of a framework in the pelagic environment by which to link local mechanism to large scale patterns. Where terrestrial ecology draws from landscape theory and practice to address issues of scale, the pelagic seascape concept is still in its infancy. We have applied the patch mosaic paradigm of landscape ecology to the study of the seasonal and interannual variability of the North Pacific to facilitate comparative analysis between pelagic ecosystems and provide spatiotemporal context for eulerian time-series studies. Using multivariate, 13-year climatologies of sea surface temperature, photosynthetically active radiation, and chlorophyll a derived from remote sensing observations, we classified hierarchical seascapes at monthly and interannual scales. These dynamic, objectively-determined seascapes offer improved hydrographic coherence relative to oceanic regions with subjectively defined and static boundaries (Chapter 2) and represent unique biogeochemical functioning (Chapter 2) and microbial communities (Chapter3). Furthermore they provide consilience between satellite studies and in situ observations (Chapter 4) and allow for objective comparison of ecosystem forcing (Chapters, 4 and 5). In Chapter 2, we rigorously tested the assumption that satellite-derived seascapes describe regions of biogeochemical coherence. The seasonal cycle of the North Pacific was characterized at three levels of spatiotemporal hierarchy and broader relevance of monthly ���resolved seascapes was assessed through analysis of variance (ANOVA) and multiple linear regression (MLR) analyses of nutrient, primary productivity, and pCO��� data. Distinct nutrient and primary productivity regimes were well-characterized in the coarsest two levels of hierarchy (ANOVA, R�� = 0.5-0.7). Finer scale partitioning was more relevant for pCO���. MLR analyses revealed differential forcing on pCO��� across seascapes and hierarchical levels and a 33 % reduction in mean model error with increased partitioning (from 18.5 ��atm to 12.0 ��atm pCO���). In Chapter 3 we verified the seascapes with in situ collections of microbial abundance and structure. Flow cytometry data was collected from two long term time series and several cruises spanning thousand kilometers of the NE Pacific; these data allowed us to quantify spatiotemporal patterns. In addition, multiple response permutation analysis revealed differences in community structure across discrete seascapes, in terms of both absolute and relative abundances. Principal component analysis of the assemblage supported seascape divisions and revealed structure along environmental gradients with strong associations with chlorophyll a and sea surface temperature and, to a lesser extent, with mixed layer depth and mean photosynthetically active radiation in the mixed layer. Differences of assemblage structure between seascapes and strength of environmental forcing were strong in the subarctic and transition zones, but less pronounced in the subtropics, suggesting satellite-detected changes in bulk properties that may be associated with local physiology or interannual shifts in seascape boundaries. Based on the work presented in Chapter 4, we discovered that interannual shifts in the boundaries of a transition seascape and two distinct oligotrophic subtropical seascapes affect the variability observed at benchmark time series Station ALOHA; the latter two seascapes oscillate in their contributions to the expansion of the entire subtropics. On interannual scales, in situ phytoplankton abundance (as measured by chl-a), net primary productivity (NPP), and the relative abundance of eukaryotic phytoplankton and Synechococcus sp. increased during periods of encroachment by the transition seascape. Conversely, the relative abundance of Prochlorococcus increased and chl ���a and NPP decreased when the highly oligotrophic seascape encroached on Station ALOHA. The dynamic range (~6 million km��) of subtropical expansion is born almost entirely by the transition zone - resulting in a transfer of ~1.2 Pg of total primary C production between a system primed for export production and one dominated by the microbial loop. In Chapter 5, we investigated multiple factors that contribute to the effectiveness of the biological pump in the transition seascape. Near-continuous measurements of net primary production (NPP), net community production (NCP) and several ecophysiological variables were collected in across subarctic, transition, and subtropical seascapes of the Northeast Pacific during August and September of 2008. Mesoscale processes and shifts in community structure contributed to high export efficiency in the subtropical seascape; the convergence of assemblage structure, high biomass, moderate NPP: NCP and high NCP contributed to biologically mediated air-sea exchange in the transition seascape. Furthermore, NPP and NCP were strongly spatially coupled in both the transition (r[subscript 1, 39]=0.70; p<0.0001) and subtropical seascapes (r[subscript 1, 45]= 0.68, p<0.0001), suggesting the possibility for empirical modeling efforts. This dissertation provides a first step to characterize the seascape variability in the NE Pacific and to understand the modulation of primary and export production in a critical transition region. The multivariate seascape approach described here provides spatiotemporal context for in situ studies and allows objective comparisons of systems' responses to climatic forcing. An integrated ocean observing system will require insight from in situ observations and experiments, ecosystem models, and satellite remote sensing. The results highlighted in this dissertation suggest that the pelagic seascape framework, through its capacity to scale both context and mechanism, may serve as an important and unifying component of such an observing system. / Graduation date: 2013